Miyakogusa Predicted Gene

Lj1g3v1222710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1222710.1 tr|I1JY66|I1JY66_SOYBN Ribonucleoside-diphosphate
reductase OS=Glycine max PE=3 SV=1,89.6,0,PFL-like glycyl radical
enzymes,NULL; R1 subunit of ribonucleotide reductase, N-terminal
domain,Ribo,CUFF.27032.1
         (808 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21790.1 | Symbols: R1, RNR1, CLS8, ATRNR1 | ribonucleotide r...  1436   0.0  

>AT2G21790.1 | Symbols: R1, RNR1, CLS8, ATRNR1 | ribonucleotide
           reductase 1 | chr2:9293529-9297580 FORWARD LENGTH=816
          Length = 816

 Score = 1436 bits (3716), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/816 (81%), Positives = 740/816 (90%), Gaps = 8/816 (0%)

Query: 1   MYVIKRDGRQEPVHFDAITARIKKLSLGLNTEHCDPVLVSQKVCAGIYKGVXXXXXXXXX 60
           MYV+KRDGRQE VHFD ITAR+KKLS GL+++HCDPVLV+QKVCAG+YKGV         
Sbjct: 1   MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60

Query: 61  XXXXXXXXXNHPDYASLAAKIAVSNLHKNTRESFSETVKIMYDHFNEESGMKAPLIADDI 120
                    NHPDYASLAA+IAVSNLHKNT++SFSET+K M+ H N+ SG+K+PLIADD+
Sbjct: 61  AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120

Query: 121 YEIIIKNAARLDSEIIYGRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
           +EII++NAARLDSEIIY RDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRVAVGIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180

Query: 181 DDIESAVKTYHLLSERWFTHASPTLFNAGTPRPQLSSCFLVCMQDDSIEGIYETLKECAV 240
           DDI+S ++TYHL+S+RWFTHASPTLFNAGTPRPQLSSCFLVCM+DDSIEGIYETLKECAV
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240

Query: 241 ISKSAGGIGVSVHNIRATGSYIGGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGAFAVY 300
           ISKSAGGIGVSVHNIRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300

Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQKNGEWSLFCPREAPGLA 360
           LEPWHAD++EFL+LRKNHGKEEHRARDLFYALW+PDLFMERVQ NG+WSLFCP EAPGLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360

Query: 361 DCWGEEFEKLYHRYEKEGKAKKVVQAQNLWFEILKAQIETGNPYMLFKDACNRKSNQQNL 420
           DCWG EFE LY +YE+EGKAKKVVQAQ LW+EIL +Q+ETG PYMLFKD+CNRKSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420

Query: 421 GTIKSSNLCTEIIQYSSPTETAVCNLASIALPQYVREKGVPVESHSSKLIGSTGSGNRYF 480
           GTIKSSNLCTEII+Y+SPTETAVCNLASIALP++VREKGVP++SH  KL GS  S NRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480

Query: 481 DFDKLAEITAVVTTNLNNIIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFMLLGLAFDS 540
           DF+KLAE+TA VT NLN IIDVNYYPVE AK SN+RHRPIGIGVQGLAD F+LLG+ FDS
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540

Query: 541 PEAQQLNKEIFETIYYHALKTSSDLAVKEGPYETYSGSPLSKGILQPDMWGVTPSNRWDW 600
           PEAQQLNK+IFETIYYHALK S++LA + GPYETY+GSP+SKGILQPDMW V PS+RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600

Query: 601 DALRETISKKGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
             LR+ ISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660

Query: 661 LHDLTEMGLWSPTIKNQIIYENGSVQNISEIPEELKAIYKTVWEIKQKTLVDMAADRGCY 720
           LHDLT+MGLW+PT+KN++I ENGS+ N++EIP++LKAIY+TVWEIKQ+T+VDMAADRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720

Query: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRTRAAADAIKFTVDTSALKEKP 780
           IDQSQSLNIHMD+PNF KLTSLHFY W KGLKTGMYYLR+RAAADAIKFTVDT+ LKEKP
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780

Query: 781 NT--------ECDVDTKMAQVVCSLTNPEECLACGS 808
           +         E D +TK+AQ+VCSLTNPEECLACGS
Sbjct: 781 SVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816