Miyakogusa Predicted Gene

Lj1g3v1147490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1147490.1 Non Characterized Hit- tr|I1KB73|I1KB73_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.13,0,Nucleic
acid-binding proteins,Nucleic acid-binding, OB-fold-like; Glutathione
S-transferase (GST), C,CUFF.26887.1
         (404 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g093870.1 | tRNA-binding region domain protein | HC | chr3...   619   e-177
Medtr4g077700.1 | methionine-tRNA ligase, putative | HC | chr4:2...   168   8e-42
Medtr4g122580.1 | methionine-tRNA ligase, putative | HC | chr4:5...   164   1e-40
Medtr4g040350.1 | tRNA-binding region domain protein | HC | chr4...   106   3e-23

>Medtr3g093870.1 | tRNA-binding region domain protein | HC |
           chr3:42898812-42891568 | 20130731
          Length = 388

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 318/404 (78%), Positives = 351/404 (86%), Gaps = 16/404 (3%)

Query: 1   MAAVDSRKKSVVLALCKHLQLDSSVIPADNFDNDIKTLYLNIAAASGQEVNHSVEVLKWV 60
           MA+VD+RKKS+VLAL KHL LD SV PAD+   DIKTLYLNI AASG EVNHS EVLKWV
Sbjct: 1   MASVDNRKKSLVLALSKHLSLDPSVFPADSAGGDIKTLYLNIIAASGHEVNHSDEVLKWV 60

Query: 61  AFAEAFPVALDASFENLKKLNDELSDKSVLLGNGLKPSEADVVVFSVIHSSLISISDTDK 120
            FAE  PV+LD  FE LK+LNDELS KSVLLGNGLKPSEADV+VFSVIHSSLIS+ DT+K
Sbjct: 61  EFAETLPVSLDGCFEILKRLNDELSGKSVLLGNGLKPSEADVIVFSVIHSSLISLPDTNK 120

Query: 121 EKLPHVLRWMDYIQHKQELIGLFEEILLQKPDFDPPVTKSIGAVEADSKTNKTEQSIKNT 180
           EKL HVLRW+DYIQHK E +GLFEEILLQKP+F+PPVTKS  AVE+D K+NKTEQS+KN 
Sbjct: 121 EKLAHVLRWVDYIQHKLEFVGLFEEILLQKPEFEPPVTKSAAAVESDLKSNKTEQSVKNV 180

Query: 181 NKPEADISKDKNKAEIKEKSTGDKQPSKPKAKSADKEGAEKQPSKPKAKSSDKEVAEKDN 240
           NK E + SKDKNKAE+K  STGD +P+K KAK A              K + KEV+EK+N
Sbjct: 181 NKAEPETSKDKNKAEVK--STGDTEPAKAKAKPA--------------KPAAKEVSEKEN 224

Query: 241 EVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCTPDDLTNRRVV 300
           EVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYC+PD+LTNRRV 
Sbjct: 225 EVSVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCSPDELTNRRVA 284

Query: 301 LITNVKPGKLRDVMSEGLVLCASNEGPTVVEPLLPPEGAKIGERVTFSGFDGKPEDVLNP 360
           LITNVKPGKLRDV+SEGLVLCASNEG T+VEPLLPPEGAKIGERV+F+G DGKPEDVLNP
Sbjct: 285 LITNVKPGKLRDVVSEGLVLCASNEGSTIVEPLLPPEGAKIGERVSFAGIDGKPEDVLNP 344

Query: 361 KKKQLDKITPYLFTDDKGVATFKGIPFMTSGGPCTSSISRATVK 404
           KKKQL+KITP+LFTDD G+ATFKGIPFMTSGGPCTSSISRAT+K
Sbjct: 345 KKKQLEKITPHLFTDDNGMATFKGIPFMTSGGPCTSSISRATIK 388


>Medtr4g077700.1 | methionine-tRNA ligase, putative | HC |
           chr4:29775248-29762938 | 20130731
          Length = 806

 Score =  168 bits (426), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/195 (46%), Positives = 129/195 (66%), Gaps = 2/195 (1%)

Query: 212 KSADKEGAEKQPSKPKAKSSD-KEVAEKDNEVSVSLLNIQVGLIRKAWKHPSADSLLVEE 270
           K+   +G EK+ +  KA SS  K  A  + E++++ L+I+VGLI+KA KHP ADSL VEE
Sbjct: 612 KTKVSDGTEKKKTAAKASSSGTKNKAAAEPEITITRLDIRVGLIKKAEKHPDADSLYVEE 671

Query: 271 IDVGEAKLRQVVSGLAKYCTPDDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEGPTVV 330
           IDVGE + R VVSGL KY   D++ NR+V ++ N+KP  +R + S+ +VL ASN   T V
Sbjct: 672 IDVGEEQTRTVVSGLVKYIPLDEMQNRKVCVLCNLKPATMRGIKSQAMVLAASNADHTKV 731

Query: 331 EPLLPPEGAKIGERVTFSGFDGKPEDVLNPKKKQLDKITPYLFTDDKGVATFKGIPFMTS 390
           E + PP  A +GER+TF G++G P+++LNPKKK  + +   L T++K  A +K IP  TS
Sbjct: 732 ELVEPPSSALVGERITFPGYEGNPDELLNPKKKVWETLQVDLHTNEKLEACYKDIPLTTS 791

Query: 391 GGPCT-SSISRATVK 404
            G CT  SI   T++
Sbjct: 792 AGICTVPSIGNGTIR 806


>Medtr4g122580.1 | methionine-tRNA ligase, putative | HC |
           chr4:50559328-50552361 | 20130731
          Length = 799

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 124/185 (67%), Gaps = 6/185 (3%)

Query: 210 KAKSADKEGAEKQPSKPKAKSSDKEVAEKDNEVSVSLLNIQVGLIRKAWKHPSADSLLVE 269
           K + +D +G  KQ    K K++    AE+D  ++++ L+I+VGLI+KA KHP ADSL +E
Sbjct: 611 KTEVSDSKGKRKQSDGAKNKAA----AEQD--ITITRLDIRVGLIKKAEKHPDADSLYIE 664

Query: 270 EIDVGEAKLRQVVSGLAKYCTPDDLTNRRVVLITNVKPGKLRDVMSEGLVLCASNEGPTV 329
           EIDVGE + R VVSGL KY   D L NR+V ++ N+KP  +R + S+ +VL ASN+  T 
Sbjct: 665 EIDVGEEQTRTVVSGLVKYIPVDQLQNRKVCVLCNLKPATMRGIKSQAMVLAASNDDHTK 724

Query: 330 VEPLLPPEGAKIGERVTFSGFDGKPEDVLNPKKKQLDKITPYLFTDDKGVATFKGIPFMT 389
           VE + PP  A +GER+TF G +GKP+++LNPKKK  + +   L T+++ VA +K +P  T
Sbjct: 725 VELVEPPSSACVGERITFPGHEGKPDELLNPKKKIWETLQTELHTNEELVACYKNVPLTT 784

Query: 390 SGGPC 394
           S G C
Sbjct: 785 SAGVC 789


>Medtr4g040350.1 | tRNA-binding region domain protein | HC |
           chr4:14464296-14468345 | 20130731
          Length = 257

 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 89/156 (57%), Gaps = 6/156 (3%)

Query: 243 SVSLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKYCTPDDLTNRRVVLI 302
           +  LL+I+VG I KAWKH  A+SL VEE+D+GE++ R + SGL  Y   ++L  ++V+++
Sbjct: 89  AAGLLDIRVGQIVKAWKHDEAESLYVEEVDIGESEPRIICSGLVNYIPLENLQGKKVIVL 148

Query: 303 TNVKPGKLRDVMSEGLVLCASNEGPTVVEPLLPPEGAKIGERVTFSGFDGKPE--DVLNP 360
           +N+KP  +R V S G+++ AS+     VE L PPE A  GER+ F   D K    D   P
Sbjct: 149 SNLKPRNMRGVKSSGMLMAASDSKHENVELLCPPEEATPGERIWFGSEDEKDNQPDAAKP 208

Query: 361 ----KKKQLDKITPYLFTDDKGVATFKGIPFMTSGG 392
               KKK  + + P+L TD    A        TS G
Sbjct: 209 NQIQKKKIWESVQPHLKTDGSCTAMLGEHVMRTSAG 244