Miyakogusa Predicted Gene

Lj1g3v1077840.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v1077840.1 tr|I1JRC1|I1JRC1_SOYBN DNA polymerase OS=Glycine
max GN=Gma.42484 PE=3 SV=1,71.51,0,DNA POLYMERASE ZETA CATALYTIC
SUBUNIT,NULL; DNA POLYMERASE CATALYTIC SUBUNIT,NULL; no
description,NU,NODE_51870_length_5412_cov_10.384331.path1.1
         (5331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS355548 similar to UniRef100_A7PS77 Cluster: DNA polym...   940   0.0  

>gnl|LJGI|FS355548 similar to UniRef100_A7PS77 Cluster: DNA polymerase; n=1; Vitis
            vinifera|Rep: DNA polymerase - Vitis vinifera (Grape),
            partial (8%)
          Length = 688

 Score =  940 bits (474), Expect = 0.0
 Identities = 474/474 (100%)
 Strand = Plus / Minus

                                                                        
Query: 4858 gatccattggaagttttggcaattgattccccatttaggatgaatgatttatattacatt 4917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  gatccattggaagttttggcaattgattccccatttaggatgaatgatttatattacatt 629

                                                                        
Query: 4918 aataaacaaataataccggctttacaacgggtgtttgggcttgttggtgctgacctgaac 4977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628  aataaacaaataataccggctttacaacgggtgtttgggcttgttggtgctgacctgaac 569

                                                                        
Query: 4978 ctgtggttcgcagagatgccccgccccataagggaagcttctgcaaagcatactttcact 5037
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568  ctgtggttcgcagagatgccccgccccataagggaagcttctgcaaagcatactttcact 509

                                                                        
Query: 5038 ccaaattctcatcgaaccagaattgattattactatctctcaaaacattgtgtactgtgt 5097
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508  ccaaattctcatcgaaccagaattgattattactatctctcaaaacattgtgtactgtgt 449

                                                                        
Query: 5098 ggtgcgttggtccaggcatcaacccatttatgtaatcaatgttctgaaaataaagttgca 5157
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448  ggtgcgttggtccaggcatcaacccatttatgtaatcaatgttctgaaaataaagttgca 389

                                                                        
Query: 5158 gctgtgacagcagttgtttgtaagacttcaaagttagagcaagagatgcaacatcttgtt 5217
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388  gctgtgacagcagttgtttgtaagacttcaaagttagagcaagagatgcaacatcttgtt 329

                                                                        
Query: 5218 tctatatgtcaccattgtggaggcggggataggcttctcgaaagtagtgtgaagtgcacg 5277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328  tctatatgtcaccattgtggaggcggggataggcttctcgaaagtagtgtgaagtgcacg 269

                                                                  
Query: 5278 tccatttcatgcttggtgttctatgagaggcgaaaagttcagaaagaactacta 5331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268  tccatttcatgcttggtgttctatgagaggcgaaaagttcagaaagaactacta 215