Miyakogusa Predicted Gene

Lj1g3v0885530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0885530.1 Non Chatacterized Hit- tr|I1IN92|I1IN92_BRADI
Uncharacterized protein (Fragment) OS=Brachypodium
dis,59.68,0.00000000000006,seg,NULL,CUFF.26585.1
         (328 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09200.1                                                       412   e-115
Glyma06g12370.1                                                       403   e-112
Glyma04g42430.1                                                       171   9e-43
Glyma01g29210.1                                                       120   2e-27
Glyma03g25780.1                                                        74   2e-13
Glyma08g09770.1                                                        70   4e-12

>Glyma04g09200.1 
          Length = 328

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/251 (80%), Positives = 225/251 (89%), Gaps = 9/251 (3%)

Query: 87  NKRDFDIEYEP---------SGSGADLDIAVAESKSFVSTQGWDPETVVDYRINEDEFHK 137
           NK+DFDIEY+P         + S AD +IA  ESKSFVSTQGWD +TV+DY+INEDEFHK
Sbjct: 78  NKKDFDIEYDPLVPAAAAAAAASAADDNIAFVESKSFVSTQGWDSDTVLDYKINEDEFHK 137

Query: 138 FSLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCD 197
             L+DCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSD+G  
Sbjct: 138 ICLVDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDYGSY 197

Query: 198 NVTEPPVDALRDPLYKSEREIYKIFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRA 257
           NVTEPP+DA RDPLYK+EREI K++LTKHYKNRR GDPEFVLDFEEIYV+DSKTKSITRA
Sbjct: 198 NVTEPPIDAPRDPLYKTEREILKVYLTKHYKNRRKGDPEFVLDFEEIYVVDSKTKSITRA 257

Query: 258 KVLVTVPGGRTRDRKSDLLVIADKGRSFKIIHASERDDPTTVIERKEWIETREEMERHLR 317
           KVLVT PGGRTRDR+SDLLVI+D+G SFKIIHASE++DPTTVIE++EW  +REEMERHLR
Sbjct: 258 KVLVTAPGGRTRDRRSDLLVISDRGSSFKIIHASEKEDPTTVIEKQEWENSREEMERHLR 317

Query: 318 KLRDFSISNWF 328
           KLRDFSISNWF
Sbjct: 318 KLRDFSISNWF 328


>Glyma06g12370.1 
          Length = 329

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/250 (80%), Positives = 223/250 (89%), Gaps = 8/250 (3%)

Query: 87  NKRDFDIEYEP--------SGSGADLDIAVAESKSFVSTQGWDPETVVDYRINEDEFHKF 138
           NK+DFDIEY+P        + +  D DIAV ESKSFVSTQGW  +TVVDY+INEDEFHK 
Sbjct: 80  NKKDFDIEYDPLVPAAAAAASAAGDDDIAVVESKSFVSTQGWHSDTVVDYKINEDEFHKI 139

Query: 139 SLLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDN 198
            L+DCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYS+PKVLAPMPQKYIRCAQSD+G  N
Sbjct: 140 CLVDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSVPKVLAPMPQKYIRCAQSDYGSYN 199

Query: 199 VTEPPVDALRDPLYKSEREIYKIFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAK 258
           VTEPP+DA RDPLYK+EREI K++LTKHYKNRR GD EFVLDFEEIYVIDSK+KSITRAK
Sbjct: 200 VTEPPIDAPRDPLYKTEREILKVYLTKHYKNRRKGDSEFVLDFEEIYVIDSKSKSITRAK 259

Query: 259 VLVTVPGGRTRDRKSDLLVIADKGRSFKIIHASERDDPTTVIERKEWIETREEMERHLRK 318
           VLVT PGGRTRDR+SDLLVI+D+G SFKIIHASE++DPTTVIE++EW  +REEMERHLRK
Sbjct: 260 VLVTAPGGRTRDRRSDLLVISDRGSSFKIIHASEKEDPTTVIEKQEWEHSREEMERHLRK 319

Query: 319 LRDFSISNWF 328
           LRDFSISNWF
Sbjct: 320 LRDFSISNWF 329


>Glyma04g42430.1 
          Length = 102

 Score =  171 bits (433), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 85/108 (78%), Positives = 94/108 (87%), Gaps = 7/108 (6%)

Query: 221 IFLTKHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRTRDRKSDLLVIAD 280
           ++LTKHYKNRR GDPEFVLDFEEIYVIDSKTKSITRAKVLVT PGGRTRDR+SDLL+   
Sbjct: 2   VYLTKHYKNRRKGDPEFVLDFEEIYVIDSKTKSITRAKVLVTAPGGRTRDRRSDLLL--- 58

Query: 281 KGRSFKIIHASERDDPTTVIERKEWIETREEMERHLRKLRDFSISNWF 328
                KIIHASE++DPTTVIE++EW  +REEMERHLRKL D SISNWF
Sbjct: 59  ----QKIIHASEKEDPTTVIEKQEWENSREEMERHLRKLIDLSISNWF 102


>Glyma01g29210.1 
          Length = 103

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 81/127 (63%), Gaps = 35/127 (27%)

Query: 87  NKRDFDIEYE-------PSGSGADLDIAVAESKSFVSTQGWDPETVVDYRINEDEFHKFS 139
           NK+DFDI+Y          G+G D +I VA+SKSFVS QGWD +T+            F 
Sbjct: 4   NKKDFDIKYNLFIPVVATIGTGDD-NIVVAKSKSFVSMQGWDFDTI------------FC 50

Query: 140 LLDCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPKVLAPMPQKYIRCAQSDFGCDNV 199
           L+DCDF IRKPPDPDNDVYDFRE               VLAPMPQKYIRC+QSD+G  NV
Sbjct: 51  LVDCDFLIRKPPDPDNDVYDFRE---------------VLAPMPQKYIRCSQSDYGSYNV 95

Query: 200 TEPPVDA 206
           T+PP+DA
Sbjct: 96  TKPPIDA 102


>Glyma03g25780.1 
          Length = 71

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 50/94 (53%), Gaps = 32/94 (34%)

Query: 87  NKRDFDIEYEPSGSGADLD---IAVAESKSFVSTQGWDPETVVDYRINEDEFHKFSLLDC 143
           NK+DFDIEY+P      +D   I V ESKSFVS QGWD                      
Sbjct: 7   NKKDFDIEYDPLVPIIVIDDDNIVVVESKSFVSMQGWD---------------------- 44

Query: 144 DFFIRKPPDPDNDVYDFREMYVTPPDTDVYSIPK 177
                   DPDNDVYDF EMYVTPPDT+VY IPK
Sbjct: 45  -------SDPDNDVYDFIEMYVTPPDTNVYLIPK 71


>Glyma08g09770.1 
          Length = 75

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/36 (94%), Positives = 34/36 (94%)

Query: 225 KHYKNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVL 260
           KHYK RR GDPEFVLDFEEIYVIDSKTKSITRAKVL
Sbjct: 40  KHYKYRRKGDPEFVLDFEEIYVIDSKTKSITRAKVL 75