Miyakogusa Predicted Gene

Lj1g3v0851740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0851740.1 tr|H9ETM8|H9ETM8_MACMU F-box only protein 9
isoform 2 OS=Macaca mulatta GN=FBXO9 PE=2
SV=1,34.48,1e-18,F-box-like,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; A Receptor for Ubiquit,CUFF.26427.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088580.1 | F-box only protein | HC | chr3:40066942-400730...   594   e-170
Medtr3g088580.2 | F-box only protein | HC | chr3:40066952-400730...   471   e-133
Medtr4g068980.1 | F-box-like protein | HC | chr4:25900712-258992...   141   8e-34

>Medtr3g088580.1 | F-box only protein | HC | chr3:40066942-40073043
           | 20130731
          Length = 329

 Score =  594 bits (1531), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 278/322 (86%), Positives = 299/322 (92%)

Query: 1   MASGSDFXXXXXXXXXXILRLKTVDYFVTRRPWLDLYGINVRPVAPFGSISRKPYVDSAL 60
           MASGSDF          +LRLKTV+YFVTRRPWLDLYG+NVRPVAPFGS SRKP+VDS+L
Sbjct: 1   MASGSDFALTVPSELESVLRLKTVNYFVTRRPWLDLYGVNVRPVAPFGSASRKPHVDSSL 60

Query: 61  IHRCLPDELLFEVFARMTPYDMGKASCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYK 120
           +HRCLPDELLFEVFARMTPYDMGKASCVCRKW+YTIRNP FWR+ACLK WQ SG VENYK
Sbjct: 61  LHRCLPDELLFEVFARMTPYDMGKASCVCRKWRYTIRNPAFWRNACLKGWQLSGAVENYK 120

Query: 121 ILQSKYDGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPS 180
           ILQSKYDGSWRKMWLLRPRLR DGLY SRNTYIR GVAEWKITNPVHVVCY+RY+RFFPS
Sbjct: 121 ILQSKYDGSWRKMWLLRPRLRFDGLYASRNTYIRVGVAEWKITNPVHVVCYYRYLRFFPS 180

Query: 181 GRFLYKNSSQKVKDVVKCMNFRSSKAECVFGGNYTLSDDKVEAAVLYPGLRPTVLRIRLR 240
           G+FLYKNSSQK+KDVVK MNFRSSK +CVFGG+YTL+DDKVEAAVLYPG+RPTVLRIR+R
Sbjct: 181 GKFLYKNSSQKIKDVVKSMNFRSSKTDCVFGGHYTLTDDKVEAAVLYPGMRPTVLRIRMR 240

Query: 241 LRGTATGANNRMDLISLVTSGVNSNEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGM 300
           LRGT TGANNRMDLISLVTSGV++NEAS  EEDILGVV+GWQDDETHNPDVPAVSHKRGM
Sbjct: 241 LRGTTTGANNRMDLISLVTSGVDTNEASTSEEDILGVVEGWQDDETHNPDVPAVSHKRGM 300

Query: 301 TPFVFVPFEEVETSVLNLPVEK 322
           TPFVFVPFEEVETS+LNLPVEK
Sbjct: 301 TPFVFVPFEEVETSLLNLPVEK 322


>Medtr3g088580.2 | F-box only protein | HC | chr3:40066952-40073043
           | 20130731
          Length = 253

 Score =  471 bits (1211), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 219/246 (89%), Positives = 234/246 (95%)

Query: 77  MTPYDMGKASCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYKILQSKYDGSWRKMWLL 136
           MTPYDMGKASCVCRKW+YTIRNP FWR+ACLK WQ SG VENYKILQSKYDGSWRKMWLL
Sbjct: 1   MTPYDMGKASCVCRKWRYTIRNPAFWRNACLKGWQLSGAVENYKILQSKYDGSWRKMWLL 60

Query: 137 RPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVV 196
           RPRLR DGLY SRNTYIR GVAEWKITNPVHVVCY+RY+RFFPSG+FLYKNSSQK+KDVV
Sbjct: 61  RPRLRFDGLYASRNTYIRVGVAEWKITNPVHVVCYYRYLRFFPSGKFLYKNSSQKIKDVV 120

Query: 197 KCMNFRSSKAECVFGGNYTLSDDKVEAAVLYPGLRPTVLRIRLRLRGTATGANNRMDLIS 256
           K MNFRSSK +CVFGG+YTL+DDKVEAAVLYPG+RPTVLRIR+RLRGT TGANNRMDLIS
Sbjct: 121 KSMNFRSSKTDCVFGGHYTLTDDKVEAAVLYPGMRPTVLRIRMRLRGTTTGANNRMDLIS 180

Query: 257 LVTSGVNSNEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSVL 316
           LVTSGV++NEAS  EEDILGVV+GWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETS+L
Sbjct: 181 LVTSGVDTNEASTSEEDILGVVEGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSLL 240

Query: 317 NLPVEK 322
           NLPVEK
Sbjct: 241 NLPVEK 246


>Medtr4g068980.1 | F-box-like protein | HC |
          chr4:25900712-25899278 | 20130731
          Length = 95

 Score =  141 bits (356), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 63/70 (90%), Positives = 69/70 (98%)

Query: 18 ILRLKTVDYFVTRRPWLDLYGINVRPVAPFGSISRKPYVDSALIHRCLPDELLFEVFARM 77
          +LRLKTV+YFVTRRPWLDLYG+NVRPVAPFGS SRKP+VDS+L+HRCLPDELLFEVFARM
Sbjct: 15 VLRLKTVNYFVTRRPWLDLYGVNVRPVAPFGSASRKPHVDSSLLHRCLPDELLFEVFARM 74

Query: 78 TPYDMGKASC 87
          TPYDMGKASC
Sbjct: 75 TPYDMGKASC 84