Miyakogusa Predicted Gene

Lj1g3v0851740.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0851740.1 tr|H9ETM8|H9ETM8_MACMU F-box only protein 9
isoform 2 OS=Macaca mulatta GN=FBXO9 PE=2
SV=1,34.48,1e-18,F-box-like,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; A Receptor for Ubiquit,CUFF.26427.1
         (322 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21760.1 | Symbols: ATFBP7, FBP7 | F-box protein 7 | chr1:764...   539   e-154

>AT1G21760.1 | Symbols: ATFBP7, FBP7 | F-box protein 7 |
           chr1:7649324-7651613 FORWARD LENGTH=328
          Length = 328

 Score =  539 bits (1389), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 249/306 (81%), Positives = 282/306 (92%), Gaps = 2/306 (0%)

Query: 19  LRLKTVDYFVTRRPWLDLYGINVRPVAPFGSISRKPYVDSALIHRCLPDELLFEVFARMT 78
           LRL+TV YF+T+RPWLDLYG++VRPV PFGS SRKP+ D ALIHRCLPDELLFEVFARM 
Sbjct: 16  LRLRTVQYFITKRPWLDLYGVHVRPVPPFGSTSRKPHFDPALIHRCLPDELLFEVFARMM 75

Query: 79  PYDMGKASCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYKILQSKYDGSWRKMWLLRP 138
           PYD+G+ASCVCRKW+YT+RNP+FWR+ACLKAWQ +GV+ENYKILQSKYDGSWRKMWLLR 
Sbjct: 76  PYDLGRASCVCRKWRYTVRNPMFWRNACLKAWQTAGVIENYKILQSKYDGSWRKMWLLRS 135

Query: 139 RLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVVKC 198
           R+RTDGLYVSRNTYIRAG+AEWKITNPVH+VCY+RYIRF+PSGRFLYKNSSQK+KDV K 
Sbjct: 136 RVRTDGLYVSRNTYIRAGIAEWKITNPVHIVCYYRYIRFYPSGRFLYKNSSQKLKDVAKY 195

Query: 199 MNFRSSKAECVFGGNYTL--SDDKVEAAVLYPGLRPTVLRIRLRLRGTATGANNRMDLIS 256
           MNF++SK+E ++ G YTL  SDDK+EAAVLYPG RPTVLRIRLRLRGTA GANNRMDL+S
Sbjct: 196 MNFKASKSENLYKGTYTLSMSDDKIEAAVLYPGTRPTVLRIRLRLRGTAIGANNRMDLLS 255

Query: 257 LVTSGVNSNEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSVL 316
           LVTSGVN  E S+ EEDILG+V+GW+DDETHNPD+PAVSHKRGMT FVFVPFEEV+ SVL
Sbjct: 256 LVTSGVNDEEISSTEEDILGLVEGWEDDETHNPDIPAVSHKRGMTAFVFVPFEEVDESVL 315

Query: 317 NLPVEK 322
           NLP EK
Sbjct: 316 NLPPEK 321