Miyakogusa Predicted Gene

Lj1g3v0438920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0438920.1 Non Characterized Hit- tr|B9R922|B9R922_RICCO
HIPL1 protein, putative OS=Ricinus communis GN=RCOM_15,68.92,0,Soluble
quinoprotein glucose dehydrogenase,Soluble quinoprotein
glucose/sorbosone dehydrogenase; THY,CUFF.25861.1
         (270 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107400.1 | hipl2 protein precursor | HC | chr4:44415144-4...   328   5e-90

>Medtr4g107400.1 | hipl2 protein precursor | HC |
           chr4:44415144-44409998 | 20130731
          Length = 697

 Score =  328 bits (840), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 141/226 (62%), Positives = 179/226 (79%)

Query: 1   MNLWGNYSVPKDNPYLDDKELEPEIWAIGFKNAWRCSFDSQRPSYFLCGDAGQDKYEEID 60
           + LWG+YS+PKDNP+ +DK+LEPEIWA+G +N WRCSFDS++PSYF CGD GQD YEE+D
Sbjct: 433 LGLWGSYSIPKDNPFSEDKDLEPEIWALGLRNPWRCSFDSEKPSYFFCGDVGQDLYEEVD 492

Query: 61  VIKKGKNYGWRVYEGPFIFHPSESPGGNTSTSSIHPIFPVMGYNHSEIDNESGSASIVGG 120
           +I KG NYGWRVYEG + F  +ESPGGNTS  SI+PI P+ GYNHS+I+   GSASI GG
Sbjct: 493 LITKGGNYGWRVYEGLYPFTTTESPGGNTSLKSINPIPPIAGYNHSQINKNEGSASITGG 552

Query: 121 YFYRAMTDPCLYGRYLYTDMYSGSVLVGTESSENSGKFTSVKIPSRCAHDSPMSCSFVQG 180
           Y YR+MTDPC++GRYLY D+Y+G++   TE   NSG FT+ KIP  CAHDSP+ C     
Sbjct: 553 YVYRSMTDPCMFGRYLYADLYAGALWAATEDPSNSGNFTTSKIPFSCAHDSPIPCDSAPS 612

Query: 181 SATPSLGYVYSLAEDNNKDIYYLTTTGVYRVSRPSRCNYLCTKEKV 226
           S+ P+LGY++S  +DNNKD+Y L ++GVYRV RPSRC+Y C++EK 
Sbjct: 613 SSLPALGYIFSFGQDNNKDVYILASSGVYRVVRPSRCSYTCSQEKA 658