Miyakogusa Predicted Gene

Lj1g3v0293680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0293680.1 Non Characterized Hit- tr|I1JXF2|I1JXF2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47989
PE,84.59,0,Exo_endo_phos,Endonuclease/exonuclease/phosphatase; xth:
exodeoxyribonuclease III (xth),Exodeoxyribo,CUFF.25506.1
         (357 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g075220.1 | DNA-(apurinic or apyrimidinic site) lyase-like...   598   e-171
Medtr3g075220.2 | DNA-(apurinic or apyrimidinic site) lyase-like...   431   e-121
Medtr1g051380.1 | apurinic endonuclease-redox protein | HC | chr...   104   2e-22
Medtr1g051380.2 | apurinic endonuclease-redox protein | HC | chr...   104   2e-22

>Medtr3g075220.1 | DNA-(apurinic or apyrimidinic site) lyase-like
           protein | HC | chr3:34235889-34229381 | 20130731
          Length = 367

 Score =  598 bits (1542), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 294/367 (80%), Positives = 316/367 (86%), Gaps = 10/367 (2%)

Query: 1   MKRFFKPVEKDSDGC-----RKKPRENDXXXXXXXXXTRKEPLKFLTWNANSFLLRVKNN 55
           MKRFFK +EKDS+ C       +  E           T+KEPLKF+TWNANS LLRVKNN
Sbjct: 1   MKRFFKVIEKDSEKCSKKPKENENEEEKKQDENEEEATKKEPLKFMTWNANSLLLRVKNN 60

Query: 56  LPEFSKFITAFDPDVIAIQEVRMPAAGSKGA-----PKNQGEIKDDTSSAKEEKKILMRA 110
             EFS FIT FDPDVIAIQEVRMPAA S  +     PKNQ E+KDDT++A+EEK+ILMRA
Sbjct: 61  WSEFSNFITTFDPDVIAIQEVRMPAASSSSSNSKSAPKNQAEVKDDTNAAREEKRILMRA 120

Query: 111 LSSPPFGSYRIWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILAEFET 170
           LS+PPFG+Y +WWSLA+SKYAGTAL VKKCFKPKSVVFNLDKIASKHEPDGRVIL EFET
Sbjct: 121 LSNPPFGNYHVWWSLAESKYAGTALFVKKCFKPKSVVFNLDKIASKHEPDGRVILVEFET 180

Query: 171 LRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHP 230
           LRLLNTYVPNNGWKEE NSFQRRRKWDKRILEFV QNSDKPLIWCGDLNVSHEEIDVS P
Sbjct: 181 LRLLNTYVPNNGWKEEPNSFQRRRKWDKRILEFVNQNSDKPLIWCGDLNVSHEEIDVSQP 240

Query: 231 EFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSW 290
           EFFS AKLNGYVPPN+ED GQPGFTLAER RFGTILREGKLVDAYRFLHKDKDME+GFSW
Sbjct: 241 EFFSTAKLNGYVPPNKEDYGQPGFTLAERARFGTILREGKLVDAYRFLHKDKDMEQGFSW 300

Query: 291 SGNPVGKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQGFYGSDHCPVTLEFSPSSN 350
           SGNP+G+YRGKRMRIDYFIVSE  KEKI ACEMHG+GIELQGFYGSDHCPVTLE SPSSN
Sbjct: 301 SGNPIGRYRGKRMRIDYFIVSEKIKEKIAACEMHGKGIELQGFYGSDHCPVTLELSPSSN 360

Query: 351 SQNEEQV 357
            QNE+ +
Sbjct: 361 PQNEDPI 367


>Medtr3g075220.2 | DNA-(apurinic or apyrimidinic site) lyase-like
           protein | HC | chr3:34235814-34232250 | 20130731
          Length = 278

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/278 (78%), Positives = 233/278 (83%), Gaps = 10/278 (3%)

Query: 1   MKRFFKPVEKDSDGC-----RKKPRENDXXXXXXXXXTRKEPLKFLTWNANSFLLRVKNN 55
           MKRFFK +EKDS+ C       +  E           T+KEPLKF+TWNANS LLRVKNN
Sbjct: 1   MKRFFKVIEKDSEKCSKKPKENENEEEKKQDENEEEATKKEPLKFMTWNANSLLLRVKNN 60

Query: 56  LPEFSKFITAFDPDVIAIQEVRMPAAGSKGA-----PKNQGEIKDDTSSAKEEKKILMRA 110
             EFS FIT FDPDVIAIQEVRMPAA S  +     PKNQ E+KDDT++A+EEK+ILMRA
Sbjct: 61  WSEFSNFITTFDPDVIAIQEVRMPAASSSSSNSKSAPKNQAEVKDDTNAAREEKRILMRA 120

Query: 111 LSSPPFGSYRIWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILAEFET 170
           LS+PPFG+Y +WWSLA+SKYAGTAL VKKCFKPKSVVFNLDKIASKHEPDGRVIL EFET
Sbjct: 121 LSNPPFGNYHVWWSLAESKYAGTALFVKKCFKPKSVVFNLDKIASKHEPDGRVILVEFET 180

Query: 171 LRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHP 230
           LRLLNTYVPNNGWKEE NSFQRRRKWDKRILEFV QNSDKPLIWCGDLNVSHEEIDVS P
Sbjct: 181 LRLLNTYVPNNGWKEEPNSFQRRRKWDKRILEFVNQNSDKPLIWCGDLNVSHEEIDVSQP 240

Query: 231 EFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILRE 268
           EFFS AKLNGYVPPN+ED GQPGFTLAER RFGTILRE
Sbjct: 241 EFFSTAKLNGYVPPNKEDYGQPGFTLAERARFGTILRE 278


>Medtr1g051380.1 | apurinic endonuclease-redox protein | HC |
           chr1:20157964-20150935 | 20130731
          Length = 507

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 144/312 (46%), Gaps = 61/312 (19%)

Query: 38  LKFLTWNANSFLLRVKNNLPEFSKFITAF--DPDVIAIQEVRMPAAGSKGAPKNQGEIKD 95
           +K L+WN N   LR    L  FS    A   D DV+ +QE ++                 
Sbjct: 247 VKLLSWNVNG--LRALLKLQGFSALQLAQREDFDVLCLQETKL----------------- 287

Query: 96  DTSSAKEEKKILMRALSSPPFGSYRIWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKI 153
                K+ ++I  R +     G    +W+ + SK  Y+GTA++ +   KP S+ + L   
Sbjct: 288 ---QEKDIEEIKQRLID----GYENSFWTCSVSKLGYSGTAIISR--IKPLSIRYGLG-- 336

Query: 154 ASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQ-NSDKPL 212
            S+H+ +GR++  EF+T  L+  YVPN+G   +  S+ R  +WD  +  ++ +    KP+
Sbjct: 337 ISEHDSEGRLVTVEFDTFYLVTGYVPNSGDGLKRLSY-RVTEWDPALSNYLKELEKSKPV 395

Query: 213 IWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLV 272
           +  GDLN +HEEID+ +P     +                GFT  ER+ F T       V
Sbjct: 396 VLTGDLNCAHEEIDIYNPAGNKRS---------------AGFTDEERKSFETNFLSNGFV 440

Query: 273 DAYRFLHKDKDMERGFS-WSGNPVGKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQ 331
           D +R  H       G++ W     G+   +  R+DYF+VSE+  +K+     H   I L 
Sbjct: 441 DTFRKQHPGV---VGYTYWGYRHGGRKYNRGWRLDYFLVSESIADKV-----HDSYI-LP 491

Query: 332 GFYGSDHCPVTL 343
              GSDHCP+ L
Sbjct: 492 DVIGSDHCPIGL 503


>Medtr1g051380.2 | apurinic endonuclease-redox protein | HC |
           chr1:20157979-20150935 | 20130731
          Length = 542

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 61/312 (19%)

Query: 38  LKFLTWNANSFLLRVKNNLPEFSKFITAF--DPDVIAIQEVRMPAAGSKGAPKNQGEIKD 95
           +K L+WN N   LR    L  FS    A   D DV+ +QE ++                 
Sbjct: 282 VKLLSWNVNG--LRALLKLQGFSALQLAQREDFDVLCLQETKL----------------- 322

Query: 96  DTSSAKEEKKILMRALSSPPFGSYRIWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKI 153
                K+ ++I  R +     G    +W+ + SK  Y+GTA++ +   KP S+ + L   
Sbjct: 323 ---QEKDIEEIKQRLID----GYENSFWTCSVSKLGYSGTAIISR--IKPLSIRYGLG-- 371

Query: 154 ASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQ-NSDKPL 212
            S+H+ +GR++  EF+T  L+  YVPN+G   +  S+ R  +WD  +  ++ +    KP+
Sbjct: 372 ISEHDSEGRLVTVEFDTFYLVTGYVPNSGDGLKRLSY-RVTEWDPALSNYLKELEKSKPV 430

Query: 213 IWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLV 272
           +  GDLN +HEEID+ +P              N+      GFT  ER+ F T       V
Sbjct: 431 VLTGDLNCAHEEIDIYNP------------AGNKRSA---GFTDEERKSFETNFLSNGFV 475

Query: 273 DAYRFLHKDKDMERGFS-WSGNPVGKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQ 331
           D +R  H       G++ W     G+   +  R+DYF+VSE+  +K+     H   I L 
Sbjct: 476 DTFRKQHPGV---VGYTYWGYRHGGRKYNRGWRLDYFLVSESIADKV-----HDSYI-LP 526

Query: 332 GFYGSDHCPVTL 343
              GSDHCP+ L
Sbjct: 527 DVIGSDHCPIGL 538