Miyakogusa Predicted Gene
- Lj1g3v0293680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0293680.1 Non Chatacterized Hit- tr|I1JXF2|I1JXF2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47989
PE,84.59,0,Exo_endo_phos,Endonuclease/exonuclease/phosphatase; xth:
exodeoxyribonuclease III (xth),Exodeoxyribo,CUFF.25506.1
(357 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48425.1 | Symbols: | DNAse I-like superfamily protein | chr... 558 e-159
AT2G41460.1 | Symbols: ARP | apurinic endonuclease-redox protein... 113 2e-25
AT3G60950.1 | Symbols: | C2 calcium/lipid-binding endonuclease/... 56 4e-08
AT2G41460.2 | Symbols: ARP | apurinic endonuclease-redox protein... 56 4e-08
>AT3G48425.1 | Symbols: | DNAse I-like superfamily protein |
chr3:17931910-17934493 FORWARD LENGTH=364
Length = 364
Score = 558 bits (1438), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/362 (71%), Positives = 304/362 (83%), Gaps = 5/362 (1%)
Query: 1 MKRFFKPVEKDSDGCRKKP-----RENDXXXXXXXXXTRKEPLKFLTWNANSFLLRVKNN 55
MKRFFKP+EK++ KKP + + + EP KF+TWNANSFLLRVKN+
Sbjct: 1 MKRFFKPIEKENSPAAKKPCLSPEKRDGDGDGVEEEKNQNEPSKFMTWNANSFLLRVKND 60
Query: 56 LPEFSKFITAFDPDVIAIQEVRMPAAGSKGAPKNQGEIKDDTSSAKEEKKILMRALSSPP 115
+FSKF++ FDPDVIAIQEVRMPAAG KG PKN E+ DDT +EEK+IL RALSSPP
Sbjct: 61 WSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTKVLREEKQILTRALSSPP 120
Query: 116 FGSYRIWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILAEFETLRLLN 175
FG+Y +WWSLADSKYAGTALLVKKCFKP+ V FNLDK+ASKHEPDGRVILAEFET RLLN
Sbjct: 121 FGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHEPDGRVILAEFETFRLLN 180
Query: 176 TYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSA 235
TY PNNGWK+E N+FQRRRKWDKRI+EF+ + SDKPLIWCGDLNVSHEEIDVSHPEFF+
Sbjct: 181 TYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTSDKPLIWCGDLNVSHEEIDVSHPEFFAT 240
Query: 236 AKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSWSGNPV 295
AKLNGYVPPN+EDCGQPGFT +ER RFG ++EG+LVDAYR+LHK+++ME GFSWSGNP+
Sbjct: 241 AKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRYLHKEQEMESGFSWSGNPI 300
Query: 296 GKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQGFYGSDHCPVTLEFSPSSNSQNEE 355
GKYRGKRMRIDYF+VSE K++IV+C+MHG+GIEL+GF+GSDHCPVTLE S S+ +
Sbjct: 301 GKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFHGSDHCPVTLELSKPSSEMEQN 360
Query: 356 QV 357
QV
Sbjct: 361 QV 362
>AT2G41460.1 | Symbols: ARP | apurinic endonuclease-redox protein |
chr2:17285731-17288769 FORWARD LENGTH=536
Length = 536
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 151/312 (48%), Gaps = 61/312 (19%)
Query: 38 LKFLTWNANSFLLRVKNNLPEFSKFITAF--DPDVIAIQEVRMPAAGSKGAPKNQGEIKD 95
+K +TWN N LR FS A + D++ +QE ++ ++KD
Sbjct: 276 VKVMTWNVNG--LRGLLKFESFSALQLAQRENFDILCLQETKL-------------QVKD 320
Query: 96 DTSSAKEEKKILMRALSSPPFGSYRIWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKI 153
+E KK L+ G +WS + SK Y+GTA++ + KP SV +
Sbjct: 321 ----VEEIKKTLID-------GYDHSFWSCSVSKLGYSGTAIISR--IKPLSVRYGTG-- 365
Query: 154 ASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQ-NSDKPL 212
S H+ +GR++ AEF++ L+NTYVPN+G + S+ R +WD+ + + + KP+
Sbjct: 366 LSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSY-RIEEWDRTLSNHIKELEKSKPV 424
Query: 213 IWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLV 272
+ GDLN +HEEID+ +P N+ GFT+ ER+ FG L + V
Sbjct: 425 VLTGDLNCAHEEIDIFNP------------AGNKRSA---GFTIEERQSFGANLLDKGFV 469
Query: 273 DAYRFLHKDKDMERGFS-WSGNPVGKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQ 331
D +R H G++ W G+ K R+DYF+VS++ +A +H I L
Sbjct: 470 DTFRKQHPGV---VGYTYWGYRHGGRKTNKGWRLDYFLVSQS-----IAANVHDSYI-LP 520
Query: 332 GFYGSDHCPVTL 343
GSDHCP+ L
Sbjct: 521 DINGSDHCPIGL 532
>AT3G60950.1 | Symbols: | C2 calcium/lipid-binding
endonuclease/exonuclease/phosphatase |
chr3:22524475-22529770 FORWARD LENGTH=627
Length = 627
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 139 KCFKPKSVVFNLDKIASKHEPDGRVILAEFETLRLLNTYVPNN---GWKEEANSFQRRRK 195
K KP V + S H+ +GR++ AEF++ L++TYVPN+
Sbjct: 500 KNIKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIED 559
Query: 196 WDKRILEFVTQ-NSDKPLIWCGDLNVSHEEIDVSHP 230
WD+ + + KP++ GDLN +HEEID+ +P
Sbjct: 560 WDRTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNP 595
>AT2G41460.2 | Symbols: ARP | apurinic endonuclease-redox protein |
chr2:17285731-17288041 FORWARD LENGTH=403
Length = 403
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 34/149 (22%)
Query: 38 LKFLTWNANSFLLRVKNNLPEFSKFITAF--DPDVIAIQEVRMPAAGSKGAPKNQGEIKD 95
+K +TWN N LR FS A + D++ +QE ++ ++KD
Sbjct: 276 VKVMTWNVNG--LRGLLKFESFSALQLAQRENFDILCLQETKL-------------QVKD 320
Query: 96 DTSSAKEEKKILMRALSSPPFGSYRIWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKI 153
+E KK L+ G +WS + SK Y+GTA++ + KP SV +
Sbjct: 321 ----VEEIKKTLID-------GYDHSFWSCSVSKLGYSGTAIISR--IKPLSVRYGTG-- 365
Query: 154 ASKHEPDGRVILAEFETLRLLNTYVPNNG 182
S H+ +GR++ AEF++ L+NTYVPN+G
Sbjct: 366 LSGHDTEGRIVTAEFDSFYLINTYVPNSG 394