Miyakogusa Predicted Gene

Lj1g3v0131210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0131210.1 Non Chatacterized Hit- tr|I3SP51|I3SP51_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.23,0,RIBOSOMAL
PROTEIN L11 METHYLTRANSFERASE (L11 MTASE),Ribosomal protein L11
methyltransferase;
METHYLT,NODE_78603_length_1409_cov_10.338538.path2.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g36070.1                                                       290   9e-79

>Glyma06g36070.1 
          Length = 253

 Score =  290 bits (742), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 149/234 (63%), Positives = 170/234 (72%), Gaps = 16/234 (6%)

Query: 1   MKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLLH 60
           MKR+QES  PV+VT+ LWVVPKW  P  PD +ATNII++PGLAFGTGEHATTKLCLLLLH
Sbjct: 22  MKRSQESLHPVQVTEGLWVVPKWCTP--PDVQATNIIVNPGLAFGTGEHATTKLCLLLLH 79

Query: 61  GCVKGGEYILDYGTGTGXXXXXXXXXX--------------XXXXXXXDIDSDAIASASE 106
           GC+KGGE+ILDYGTGTG                               D+DS+AIASAS+
Sbjct: 80  GCIKGGEHILDYGTGTGILAIAALKLTLNSNFDILLPYKFGAAFAVGVDVDSEAIASASQ 139

Query: 107 NAALNNIEPDKMQLLLIXXXXXXXXXXXXXXGVVEGERTCEIQTVTGQYKYDVVIANMLL 166
           NA LNNI  DKMQL L+              GV+EGE TCEI  VT + K+DVV+AN+LL
Sbjct: 140 NAYLNNIGQDKMQLHLVASKTSSSSKNDLTFGVMEGENTCEIHPVTDEEKFDVVVANILL 199

Query: 167 NPLLDLADQIVSCAKPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWAC 220
           NPLLDLADQI+S AKPGAV+GLSGILSEQVQYII+RYSPFLEGIEVS MD+WAC
Sbjct: 200 NPLLDLADQIISHAKPGAVVGLSGILSEQVQYIIERYSPFLEGIEVSKMDDWAC 253