Miyakogusa Predicted Gene
- Lj1g3v0131210.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0131210.1 Non Characterized Hit- tr|I3SP51|I3SP51_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.23,0,RIBOSOMAL
PROTEIN L11 METHYLTRANSFERASE (L11 MTASE),Ribosomal protein L11
methyltransferase;
METHYLT,NODE_78603_length_1409_cov_10.338538.path2.1
(226 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g061260.1 | ribosomal protein L11 methyltransferase | HC |... 294 4e-80
Medtr8g058780.1 | ribosomal protein L11 methyltransferase | HC |... 294 4e-80
Medtr8g058780.2 | ribosomal protein L11 methyltransferase | HC |... 293 9e-80
>Medtr8g061260.1 | ribosomal protein L11 methyltransferase | HC |
chr8:21062910-21068192 | 20130731
Length = 364
Score = 294 bits (753), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 170/225 (75%), Gaps = 2/225 (0%)
Query: 1 MKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLLH 60
+KR+QESF PVE+TK LWVVP+WS P PD +ATNI+L+PG AFGTGEHATTKLCLLLLH
Sbjct: 130 IKRSQESFHPVEITKGLWVVPEWSTP--PDVQATNIMLNPGHAFGTGEHATTKLCLLLLH 187
Query: 61 GCVKGGEYILDYGTGTGXXXXXXXXXXXXXXXXXDIDSDAIASASENAALNNIEPDKMQL 120
C+ GGEYILDYGTG+G D+D+ AIASA +NAALNNI PD++QL
Sbjct: 188 DCITGGEYILDYGTGSGILAIAALKFGAAFAVGVDVDAQAIASAYQNAALNNIGPDRIQL 247
Query: 121 LLIXXXXXXXXXXXXXXGVVEGERTCEIQTVTGQYKYDVVIANMLLNPLLDLADQIVSCA 180
LI G VEGE T EIQT+T + KYDVVIAN+LLNPLLD ADQI+S A
Sbjct: 248 QLIAGENSLSSKDDQTSGFVEGENTHEIQTITDKDKYDVVIANILLNPLLDNADQIISRA 307
Query: 181 KPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWACVSGKK 225
KPGAVIGLSGILSEQV II +YSPFLEGIEVS +D+WACVSG+K
Sbjct: 308 KPGAVIGLSGILSEQVHQIINKYSPFLEGIEVSKLDDWACVSGRK 352
>Medtr8g058780.1 | ribosomal protein L11 methyltransferase | HC |
chr8:20276240-20281623 | 20130731
Length = 364
Score = 294 bits (753), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 170/225 (75%), Gaps = 2/225 (0%)
Query: 1 MKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLLH 60
+KR+QESF PVE+TK LWVVP+WS P PD +ATNI+L+PG AFGTGEHATTKLCLLLLH
Sbjct: 130 IKRSQESFHPVEITKGLWVVPEWSTP--PDVQATNIMLNPGHAFGTGEHATTKLCLLLLH 187
Query: 61 GCVKGGEYILDYGTGTGXXXXXXXXXXXXXXXXXDIDSDAIASASENAALNNIEPDKMQL 120
C+ GGEYILDYGTG+G D+D+ AIASA +NAALNNI PD++QL
Sbjct: 188 DCITGGEYILDYGTGSGILAIAALKFGAAFAVGVDVDAQAIASAYQNAALNNIGPDRIQL 247
Query: 121 LLIXXXXXXXXXXXXXXGVVEGERTCEIQTVTGQYKYDVVIANMLLNPLLDLADQIVSCA 180
LI G VEGE T EIQT+T + KYDVVIAN+LLNPLLD ADQI+S A
Sbjct: 248 QLIAGENSLSSKDDQTSGFVEGENTHEIQTITDKDKYDVVIANILLNPLLDNADQIISRA 307
Query: 181 KPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWACVSGKK 225
KPGAVIGLSGILSEQV II +YSPFLEGIEVS +D+WACVSG+K
Sbjct: 308 KPGAVIGLSGILSEQVHQIINKYSPFLEGIEVSKLDDWACVSGRK 352
>Medtr8g058780.2 | ribosomal protein L11 methyltransferase | HC |
chr8:20276457-20281717 | 20130731
Length = 321
Score = 293 bits (750), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/225 (65%), Positives = 170/225 (75%), Gaps = 2/225 (0%)
Query: 1 MKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLLH 60
+KR+QESF PVE+TK LWVVP+WS P PD +ATNI+L+PG AFGTGEHATTKLCLLLLH
Sbjct: 87 IKRSQESFHPVEITKGLWVVPEWSTP--PDVQATNIMLNPGHAFGTGEHATTKLCLLLLH 144
Query: 61 GCVKGGEYILDYGTGTGXXXXXXXXXXXXXXXXXDIDSDAIASASENAALNNIEPDKMQL 120
C+ GGEYILDYGTG+G D+D+ AIASA +NAALNNI PD++QL
Sbjct: 145 DCITGGEYILDYGTGSGILAIAALKFGAAFAVGVDVDAQAIASAYQNAALNNIGPDRIQL 204
Query: 121 LLIXXXXXXXXXXXXXXGVVEGERTCEIQTVTGQYKYDVVIANMLLNPLLDLADQIVSCA 180
LI G VEGE T EIQT+T + KYDVVIAN+LLNPLLD ADQI+S A
Sbjct: 205 QLIAGENSLSSKDDQTSGFVEGENTHEIQTITDKDKYDVVIANILLNPLLDNADQIISRA 264
Query: 181 KPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWACVSGKK 225
KPGAVIGLSGILSEQV II +YSPFLEGIEVS +D+WACVSG+K
Sbjct: 265 KPGAVIGLSGILSEQVHQIINKYSPFLEGIEVSKLDDWACVSGRK 309