Miyakogusa Predicted Gene

Lj1g3v0131210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0131210.1 Non Chatacterized Hit- tr|I3SP51|I3SP51_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.23,0,RIBOSOMAL
PROTEIN L11 METHYLTRANSFERASE (L11 MTASE),Ribosomal protein L11
methyltransferase;
METHYLT,NODE_78603_length_1409_cov_10.338538.path2.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53920.1 | Symbols:  | ribosomal protein L11 methyltransferas...   184   3e-47

>AT5G53920.1 | Symbols:  | ribosomal protein L11
           methyltransferase-related | chr5:21892124-21894087
           FORWARD LENGTH=371
          Length = 371

 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/226 (47%), Positives = 141/226 (62%), Gaps = 18/226 (7%)

Query: 1   MKRAQESFCPVEVTKDLWVVPKWSAPRPPDDKATNIILDPGLAFGTGEHATTKLCLLLLH 60
           + + Q+ F PVE+ + LW+VP+W++P  P  +A NIIL+PG AFGTGEH TTKLCLLLL 
Sbjct: 158 ITKNQDLFQPVEIAERLWIVPEWTSP--PVAEAVNIILNPGFAFGTGEHPTTKLCLLLLQ 215

Query: 61  GCVKGGEYILDYGTGTGXXXXXXXXXXXXXXXXXDIDSDAIASASENAALNNIEPDKMQL 120
             +KGGE  LDYGTG+G                 DID  AI SA  NAALNNI  +K++L
Sbjct: 216 SLIKGGEAFLDYGTGSGILAIAALKFGAASSVGVDIDPLAINSAIHNAALNNIPLEKLEL 275

Query: 121 LLIXXXXXXXXXXXXXXGVVEGERTCEIQTVTGQYKYDVVIANMLLNPLLDLADQIVSCA 180
            L                     R   +Q    + ++DVVIAN+LLNP+++LAD I+S  
Sbjct: 276 HLAPIENSSSG------------REIPLQ----KEQFDVVIANILLNPVMNLADHILSFV 319

Query: 181 KPGAVIGLSGILSEQVQYIIQRYSPFLEGIEVSHMDEWACVSGKKK 226
           KPGA IG+SGILSEQ+  + +RYSPFLE I V+ + +W C+SG KK
Sbjct: 320 KPGATIGISGILSEQLPNVRERYSPFLEDISVATIGDWVCMSGTKK 365