Miyakogusa Predicted Gene
- Lj1g3v0116710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0116710.1 tr|Q5W964|Q5W964_9BRYO PpPPR_98 protein
OS=Physcomitrella patens GN=PpPPR_98 PE=2
SV=1,23.98,3e-18,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; TPR-like,NULL;
PPR_2,Pe,CUFF.25830.1
(1653 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82021 similar to UniRef100_A7QT63 Cluster: Chromosome... 1855 0.0
>gnl|LJGI|TC82021 similar to UniRef100_A7QT63 Cluster: Chromosome chr1 scaffold_166,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_166, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1370
Score = 1855 bits (936), Expect = 0.0
Identities = 948/952 (99%)
Strand = Plus / Plus
Query: 701 atagttacagtgtaaaacttggcttggaatctgaggtctcagttggtactccactagtgg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagttacagtgtaaaacttggcttggaatctgaggtctcagttggtactccactagtgg 61
Query: 761 acttttattctaagtgtggaaggtttgaagctgcatgtcaagcttttgagagcatacgtg 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acttttattctaagtgtggaaggtttgaagctgcatgtcaagcttttgagagcatacgtg 121
Query: 821 aaccaaatgatttttcatggagtgctataatcactggatactgccaaagtggtagatttg 880
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 122 aaccaaatgatttttcatggagtgctataatcactggatacggccaaagtggtagatttg 181
Query: 881 ataaggctcttgaaacttttaaaaatataagaagtaaaggagtgatattgaattcattcg 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataaggctcttgaaacttttaaaaatataagaagtaaaggagtgatattgaattcattcg 241
Query: 941 tctataccaacatttttcaagcatgctctgctatctcagatttagtttatggtgctcagg 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctataccaacatttttcaagcatgctctgctatctcagatttagtttatggtgctcagg 301
Query: 1001 ttcacgcagatgcaataaaaaaggggctagttcaatacctttccggggagagtgctatga 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttcacgcagatgcaataaaaaaggggctagttcaatacctttccggggagagtgctatga 361
Query: 1061 tcacgatgtactcaaaatgcggaaaattggactatgcatatcaagcattcttgactatag 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcacgatgtactcaaaatgcggaaaattggactatgcatatcaagcattcttgactatag 421
Query: 1121 agaaacctgatactattgcatggactgctatcatatgtgcttatgcttaccatggaaaat 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agaaacctgatactattgcatggactgctatcatatgtgcttatgcttaccatggaaaat 481
Query: 1181 ctgaagctgtgaagcttttccacaagatgctgaggtctggtgtaaggccaaatgctgtca 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgaagctgtgaagcttttccacaagatgctgaggtctggtgtaaggccaaatgctgtca 541
Query: 1241 cattcattggtttgttaaatgcttgtagtcattcaggtttagttaaagaaggaaagcagt 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cattcattggtttgttaaatgcttgtagtcattcaggtttagttaaagaaggaaagcagt 601
Query: 1301 ttttagattcaatgagtgtgaaatacggcgtcgacccaacaattgatcattacaattgca 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttttagattcaatgagtgtgaaatacggcgtcgacccaacaattgatcattacaattgca 661
Query: 1361 tgattggtgtatactctcgtgctggattattacaggaagctctggagatgataaggagta 1420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 662 tgattggtgtatactctcgtgctggattattacaggaggctctggagatgataaggagta 721
Query: 1421 tgccatttgaacctgatacattaagttggaaaactttactaggaggatgttggagccatc 1480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgccgtttgaacctgatacattaagttggaaaactttactaggaggatgttggagccatc 781
Query: 1481 ggaatctcgagaccgcgtcgattgcagctggaaaaatctttcaccttgacccacttgact 1540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ggaatctcgagaccgcgtcgattgcagctggaaaaatctttcaccttgacccacttgact 841
Query: 1541 ctgctacttatgtgaccatgttcaacttacatgctttggctgggaactgggatgaagcag 1600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctgccacttatgtgaccatgttcaacttacatgctttggctgggaactgggatgaagcag 901
Query: 1601 cccaatatagaaagatgatggctgaaaggaacttgaggaaggaagtgagctg 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 cccaatatagaaagatgatggctgaaaggaacttgaggaaggaagtgagctg 953