Miyakogusa Predicted Gene

Lj1g3v0027700.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0027700.5 tr|G7ZVA2|G7ZVA2_MEDTR Gamma-tubulin complex
component OS=Medicago truncatula GN=MTR_023s0007 PE=4
S,69.58,0,seg,NULL; Spc97_Spc98,Spc97/Spc98; SPC97 / SPC98 FAMILY
PROTEIN,NULL; GAMMA TUBULIN COMPLEX PROTEIN,,CUFF.25285.5
         (775 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g45540.1                                                       999   0.0  
Glyma08g24150.1                                                        92   3e-18
Glyma03g30240.1                                                        79   1e-14
Glyma19g33160.1                                                        75   3e-13
Glyma10g02230.1                                                        68   4e-11
Glyma02g02100.1                                                        67   7e-11
Glyma06g03980.1                                                        66   1e-10

>Glyma01g45540.1 
          Length = 1266

 Score =  999 bits (2583), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/824 (64%), Positives = 586/824 (71%), Gaps = 108/824 (13%)

Query: 1    MVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGPSFDKGGETLDKLAQLLSENKSII 60
            MV ARE+YYKRMN KIES LSSLE+RYQQ AM A  PSFD GG TLDKL Q++SEN  + 
Sbjct: 406  MVLARENYYKRMNEKIESLLSSLEVRYQQVAMRALVPSFDNGGGTLDKLGQIMSENNFVG 465

Query: 61   RPTDDEGISNVGFDNLGSDVSSTVDEFXXXXXXXXXXXXXXXXXXXXXXXXXQLSGWPCP 120
             PT D+   N+G  +LGSDVSST+DEF                         QLSGW CP
Sbjct: 466  CPTADKRSLNMGIGDLGSDVSSTIDEFSLLEDVCDLSESSSLYSSEEQLDCDQLSGWSCP 525

Query: 121  IVGHQNHLSALSFLKSTTLNSSIQNSSYLEKLGSDSHGICDKMNAIDILSKSSDEGMISG 180
            +VG QNHLSALSFLKS+TLN+SIQNS + E  GSDSHGICDKM+A D+L K+S E +IS 
Sbjct: 526  VVGQQNHLSALSFLKSSTLNNSIQNSCHHESSGSDSHGICDKMDATDVLMKTSHEVVISS 585

Query: 181  LMXXXXXXXXXXXXCKFSIQYRDSWIDSCSAMGHLLRKSFDEDEIVEQKVTEKHQGSLRY 240
             M            CKFSIQ R+S IDSCS MGH L                        
Sbjct: 586  HMSNPLNPENSSCLCKFSIQDRESLIDSCSGMGHFL------------------------ 621

Query: 241  SKLCHGVIAIQDTFNKEALSEDQPDSNALASSLYSLQPLKIGHQCNHPSINPFSMNPMLT 300
                      + +F+ +   E +                     CNHPSINP S+NPMLT
Sbjct: 622  ----------KKSFDNDGTVEPK---------------------CNHPSINPLSVNPMLT 650

Query: 301  RNALLHPMGKNEEKCKADSEQTWPYFNFSTVEDPCKVYMNKLPTNSRCGHASSFPEDSSA 360
            RN++LH MG+N  K KAD EQT PYFNFSTVEDPCKVYM+K+PTNSRC  ASSF  DS+ 
Sbjct: 651  RNSILHLMGRNGGKYKADHEQTLPYFNFSTVEDPCKVYMDKVPTNSRCRSASSFTLDSNV 710

Query: 361  PTYVNRNNEHGEIGHDKEDGLVDVPKYCFDTSLDTMDHKQSILTVVSGGSSWERLLGSFE 420
                ++NNEHGEI   +E+GLVDVPK CFD S D MDHK   LTVVSGGSSWERLLGSF 
Sbjct: 711  SNRNDKNNEHGEIDCGRENGLVDVPKVCFDASPDLMDHKH--LTVVSGGSSWERLLGSFG 768

Query: 421  KTVPLHCDATQKQNLLSTFEIPLDIIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHL 480
            KTV  + D TQKQ+LLS FEIPLDIII+KCLLQEIMLQYNYVSKL INVLEEAFKLQEHL
Sbjct: 769  KTV--NVDDTQKQSLLSAFEIPLDIIIDKCLLQEIMLQYNYVSKLAINVLEEAFKLQEHL 826

Query: 481  LALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQGLLELSIQKSSCEQDTYKDQ 540
            LALRRYHFMELADWADLFILSLWHHKWS+TEANERLSEIQGLLELSIQKSSCEQDT+KD+
Sbjct: 827  LALRRYHFMELADWADLFILSLWHHKWSVTEANERLSEIQGLLELSIQKSSCEQDTHKDR 886

Query: 541  LFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKL 600
            LFVYMKGHGKLPLSASAIGVRSFDFLGLGYHV WPL IVLTP ALK+YADIFSFLIQVKL
Sbjct: 887  LFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVQWPLSIVLTPAALKVYADIFSFLIQVKL 946

Query: 601  AIFSLTDVWCSLKDMVHTT----------------GKNLDSELQEC-------------- 630
            AIFSLTDVWCSLK  V +T                G  L S    C              
Sbjct: 947  AIFSLTDVWCSLKLAVTSTSLPGSAPFSLVHCAVDGIPLKSPPSSCCFNLFSDLLLLHPC 1006

Query: 631  -------------------GAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHS 671
                                + HLN+L+KMRHQI+HFVSTLQQYVESQLSHVSWCRFLHS
Sbjct: 1007 CQSLLSYPCAVFLPSAMSSCSRHLNMLMKMRHQINHFVSTLQQYVESQLSHVSWCRFLHS 1066

Query: 672  LQHKVKDMMDLESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDFRSCLTVGAWDT 731
            LQHKVKDMMDLESVHMEYLADSLCICF+SDETKAVG+IIESILQCALDFRSC+TVG+WD+
Sbjct: 1067 LQHKVKDMMDLESVHMEYLADSLCICFLSDETKAVGSIIESILQCALDFRSCITVGSWDS 1126

Query: 732  RSEQGNSLGRLSTINISQVLSIKQKFDRSLKELHFCYIREPKHG 775
             S+  + LG+LS INISQVLSIKQKFDRSLKELH CYI+ PKHG
Sbjct: 1127 GSDPEDLLGKLSKINISQVLSIKQKFDRSLKELHICYIKGPKHG 1170


>Glyma08g24150.1 
          Length = 50

 Score = 91.7 bits (226), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/49 (81%), Positives = 44/49 (89%)

Query: 560 VRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFSLTDV 608
           VRSFDFLGLGYH+ WP  IVLTP ALK+Y DIF+FLIQVKL+IFSLTDV
Sbjct: 1   VRSFDFLGLGYHMQWPFSIVLTPAALKVYGDIFNFLIQVKLSIFSLTDV 49


>Glyma03g30240.1 
          Length = 832

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 30/273 (10%)

Query: 462 VSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQG 521
           + K  ++V+ + +K +EH LA+++Y  +   D+   +++ +   + S         ++ G
Sbjct: 464 IDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQ-YLMDIVGPELSEPANTISSFKLSG 522

Query: 522 LLELSIQKSSCEQDTYK--DQLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIV 579
           LLE +I+ S+ + D  +  D+L V M  H          G R +D   L Y    PL  V
Sbjct: 523 LLETAIRASNAQYDDPEILDRLRVKMMPHES--------GDRGWDVFSLEYDARVPLDTV 574

Query: 580 LTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLK----------DMVHTTGKNLDSELQE 629
            T   +  Y  IF+FL +++    +LT  W ++K           + H     L S L+ 
Sbjct: 575 FTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRR 634

Query: 630 CGAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEY 689
           C          +  +I+HF+S LQ Y+  ++  VSW  FL  ++   KD+ DL + H +Y
Sbjct: 635 CQV--------LWVEINHFISNLQYYIMFEVLEVSWSNFLAEME-VAKDLDDLLAAHEKY 685

Query: 690 LADSLCICFMSDETKAVGNIIESILQCALDFRS 722
           L   +    + + ++++   +  I    L FRS
Sbjct: 686 LHSIVEKSLLGELSQSLYKSLFVIFDLILRFRS 718


>Glyma19g33160.1 
          Length = 764

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 30/241 (12%)

Query: 462 VSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQG 521
           + K  ++V+ + +K +EH LA+++Y  +   D+   +++ +   + S         ++ G
Sbjct: 419 IDKHLLDVIFKRYKFKEHCLAIKQYLLLGQGDFVQ-YLMDIVGPELSEPANTISSFKLSG 477

Query: 522 LLELSIQKSSCEQDT--YKDQLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIV 579
           LLE +I+ S+ + D     D+L V M  H          G R +D   L Y    PL  V
Sbjct: 478 LLETAIRASNAQYDDPDILDRLRVKMMPHES--------GDRGWDVFSLEYDARVPLDTV 529

Query: 580 LTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLK----------DMVHTTGKNLDSELQE 629
            T   +  Y  IF+FL +++    +LT  W ++K           + H     L S L+ 
Sbjct: 530 FTESVMTRYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRR 589

Query: 630 CGAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEY 689
           C          +  +I+HF+S LQ Y+  ++  VSW  FL  ++   KD+ DL + H +Y
Sbjct: 590 CQV--------LWVEINHFISNLQYYIMFEVLEVSWSNFLAEME-LAKDLDDLLAAHEKY 640

Query: 690 L 690
           L
Sbjct: 641 L 641


>Glyma10g02230.1 
          Length = 732

 Score = 67.8 bits (164), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 8/172 (4%)

Query: 554 SASAIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLK 613
           ++S + V  +D + L Y VDWPL +  T   L  Y  IF +L+++K     L  +W S+ 
Sbjct: 483 ASSEVSVDGWDGIALEYSVDWPLHLFFTQEVLSKYLRIFQYLLRLKRTQMELEKLWASVM 542

Query: 614 DMVHTTGKNLDSELQECGAGH-----LNILIKMRHQISHFVSTLQQYVESQLSHVSWCRF 668
              H+      ++ ++C            + ++R  ++  V  LQ Y++  +    W   
Sbjct: 543 HQYHSDFPKHRNDQEKCSEAQQKRQRFRPMWRVREHMAFLVRNLQFYIQVDVIESQW-NI 601

Query: 669 LHSLQHKVKDMMDLESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDF 720
           L S   +  D  +L   H EYL+  +   F+  +  +V  I++SI++  L F
Sbjct: 602 LQSHIQESHDFTELVGFHQEYLSALISQTFL--DIGSVSRILDSIMKLCLQF 651


>Glyma02g02100.1 
          Length = 733

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 55/323 (17%)

Query: 476 LQEHLLALRRYHFMELADWADLFI-----LSLWHHKWSITEANERLSEIQGLLELSIQKS 530
           L  HL AL+ Y  +   D+   F+     L     + S  EA+     +    +L+  K+
Sbjct: 382 LNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEAD-----LMVPFQLAALKT 436

Query: 531 SCEQDTYKDQLFVYMKGHG--------KLPLSASAI---------------GVRSFDFLG 567
             E+D Y  ++ + M   G         LP   S++                V  +D + 
Sbjct: 437 IGEEDKYFSKVSLRMPSFGITVKPSLLDLPKPTSSVDGSSGASLSNALSEMSVDGWDGIA 496

Query: 568 LGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLKDMVHTTGKNLDSEL 627
           L Y VDWPL +  T   L  Y  IF +L+++K     L  +W S+    H+      ++ 
Sbjct: 497 LEYSVDWPLHLFFTQEVLSKYLRIFQYLLRLKRTQMELEKLWASVMHQYHSDFPKHRNDQ 556

Query: 628 QECGAGH-----LNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDL 682
           ++C            + ++R  ++  V  LQ Y++  +    W   L S   +  D  +L
Sbjct: 557 EKCSEAQQKRQRFRPMWRVREHMAFLVRNLQFYIQVDVIESQW-NILQSHIQESHDFTEL 615

Query: 683 ESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDFRSCLTVGAWDTRSEQGNSLGRL 742
              H EYL+  +   F+  +  +V  I++SI++  L F        W+  ++   S    
Sbjct: 616 VGFHQEYLSALISQTFL--DIGSVSRILDSIMKLCLQF-------CWNIENQDNCS---- 662

Query: 743 STINISQVLSIKQKFDRSLKELH 765
              N S++  I ++F++    L+
Sbjct: 663 ---NTSELEHIAEEFNKKSNSLY 682


>Glyma06g03980.1 
          Length = 957

 Score = 66.2 bits (160), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 127/300 (42%), Gaps = 37/300 (12%)

Query: 441 IPLDIIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFIL 500
           +PL +I++ CL   I  Q +Y+    +  L   ++  + L  LR  + +   D    F L
Sbjct: 583 LPL-VIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRFMDELAVLRAIYLLGSGDLLQHF-L 640

Query: 501 SLWHHKWSITEANERLSEIQGLLELSIQKSS-CEQDTYKDQLFVYMKGH----------- 548
           ++  +K    EA +   E+  +L+ SI+ S+ C   +  D L V +  +           
Sbjct: 641 TVIFNKLDKGEAWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKNRVDGDEEASTA 700

Query: 549 GKLPLS----ASAIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFS 604
           G L       A++ G+   D L   Y V WPL ++    A+K Y  +  FL++VK A F 
Sbjct: 701 GVLSTPRQSHANSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFV 760

Query: 605 LTDV--WCSLKDMVHTTGKNLDSELQECGAGHLNILIKMRHQISHFVSTLQQYVESQLSH 662
           L  V  W     M    G   ++               +  ++ HFV    QYV  ++ H
Sbjct: 761 LDKVRRW-----MWKGKGSATNNRKHHW---------LVEQKLLHFVDAFHQYVMDRVYH 806

Query: 663 VSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICF-MSDETKA-VGNIIESILQCALDF 720
            +W R L       K + ++  VH  Y+      CF + D+  A + + I SIL  ALDF
Sbjct: 807 SAW-RELCEGMTAAKSLDEVIEVHEAYILSIQRQCFVVPDKLGALIASRINSILGIALDF 865