Miyakogusa Predicted Gene

Lj1g3v0027700.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0027700.5 tr|G7ZVA2|G7ZVA2_MEDTR Gamma-tubulin complex
component OS=Medicago truncatula GN=MTR_023s0007 PE=4
S,69.58,0,seg,NULL; Spc97_Spc98,Spc97/Spc98; SPC97 / SPC98 FAMILY
PROTEIN,NULL; GAMMA TUBULIN COMPLEX PROTEIN,,CUFF.25285.5
         (775 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g004880.1 | Spc97/Spc98 family of spindle pole body (SBP) ...  1067   0.0  
Medtr5g004880.2 | Spc97/Spc98 family of spindle pole body (SBP) ...  1061   0.0  
Medtr7g093560.1 | tubulin gamma complex-associated protein | HC ...    84   5e-16
Medtr3g101230.1 | Spc97/Spc98 family of spindle pole body (SBP) ...    65   2e-10
Medtr1g088410.1 | tubulin gamma complex-associated protein | HC ...    61   4e-09

>Medtr5g004880.1 | Spc97/Spc98 family of spindle pole body (SBP)
            component | HC | chr5:175920-164883 | 20130731
          Length = 1188

 Score = 1067 bits (2760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/774 (70%), Positives = 607/774 (78%), Gaps = 18/774 (2%)

Query: 1    MVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGPSFDKGGETLDKLAQLLSENKSII 60
            MV ARESYYKRMN KIES LSSLE+RYQQ  MHA   SFD    TLDKL QL+SE++ I+
Sbjct: 402  MVLARESYYKRMNEKIESLLSSLEVRYQQVPMHAPVSSFDNDVGTLDKLGQLMSEDEPIV 461

Query: 61   RPTDDEGISNVGFDNLGSDVSSTVDEFXXXXXXXXXXXXXXXXXXXXXXXXXQLSGWPCP 120
              T D+  SN+G +NL SDVSS  DE                          QLSGWPCP
Sbjct: 462  CSTADKSSSNMGSNNLDSDVSSMEDEMSLLEDMYGQSESSSLNSSDEQLESDQLSGWPCP 521

Query: 121  IVGHQNHLSALSFLKSTTLNSSIQNSSYLEKLGSDSHGICDKMNAIDILSKSSDEGMISG 180
              G QNHLSALSFLK TTLNSSIQNS + EK GSDSH ICDKM+A+D L KSS++GMIS 
Sbjct: 522  AAGQQNHLSALSFLKFTTLNSSIQNSRHHEKPGSDSHEICDKMDAVDHLMKSSNKGMISS 581

Query: 181  LMXXXXXXXXXXXXCKFSIQYRDSWIDSCSAMGHLLRKSFDEDEIVEQKVTEKHQGSLRY 240
             M             KFSI+ R S IDS SAM  LL+KSFD D  VEQK+TEKH  S++Y
Sbjct: 582  HMFDPQNPENSWYSSKFSIEQRGSCIDSYSAMDDLLKKSFDADGTVEQKMTEKHLQSMKY 641

Query: 241  SKLCHGVIAIQDTFNKEALSEDQPDSNALASSLYSLQPLKIGHQCNHPSINPFSMNPMLT 300
            S+LC   +A+ D+ + E LSEDQP +N  AS L   QPLK+ HQCN PSINPFSMNPMLT
Sbjct: 642  SQLCR--VAVSDSLSVETLSEDQPVNNTPASFLCDFQPLKVDHQCNLPSINPFSMNPMLT 699

Query: 301  RNALLHPMGKNEEKCKADSEQTWPYFNFSTVEDPCKVYMNKLPTNSRCGHASSFPEDSSA 360
            RN L         +  AD  Q +PYFNFSTVEDPCKVYM+KL T+S C +  SFP DS A
Sbjct: 700  RNVL--------PQQTADCAQPFPYFNFSTVEDPCKVYMDKLLTDSICTNTYSFPPDSCA 751

Query: 361  PTYVNRNNEHGEIGHDKEDGLVDVPKYCFDTSLDTMDHKQSILTVVSGGSSWERLLGSFE 420
             TY N+NN+HGEI    E+GLVD PKY FD SLD +DHKQ +LT  SGGSSW RLLGSF 
Sbjct: 752  STYGNQNNDHGEIDRGNEEGLVDEPKYGFDASLDVVDHKQYVLTDTSGGSSWGRLLGSFR 811

Query: 421  KTVPLHCDATQKQNLLSTFEIPLDIIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHL 480
            KTV   CDATQ+Q LLSTFE+PLDIII+KCL+QEIM+QYNYVSKL INVLEEAFKLQEHL
Sbjct: 812  KTV--DCDATQRQTLLSTFEMPLDIIIDKCLIQEIMVQYNYVSKLIINVLEEAFKLQEHL 869

Query: 481  LALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQGLLELSIQKSSCEQDTYKDQ 540
            LALRRYHFMELADWADLFILSLW HKWS+TEA ERL EIQGLLELSIQKSSCEQDT K++
Sbjct: 870  LALRRYHFMELADWADLFILSLWRHKWSVTEATERLPEIQGLLELSIQKSSCEQDTNKNR 929

Query: 541  LFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKL 600
            LFVYMKG GKLPLSASAIG+RSFDFLGLGYHVDWPLCI+LTP ALKIYADIFSFLIQVKL
Sbjct: 930  LFVYMKGRGKLPLSASAIGLRSFDFLGLGYHVDWPLCIILTPAALKIYADIFSFLIQVKL 989

Query: 601  AIFSLTDVWCSLKDMVHTTGKNLDSELQECGAGHLNILIKMRHQISHFVSTLQQYVESQL 660
            A+FSLTDVWCSLKDM HTT K L++E  + GAGHLNIL+KMRHQISHFVSTLQQYVESQL
Sbjct: 990  ALFSLTDVWCSLKDMAHTTNKGLNAEPYQPGAGHLNILMKMRHQISHFVSTLQQYVESQL 1049

Query: 661  SHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDF 720
            SHVSWCRFLHSLQHKVKDMMDLESVH EYLADSL ICF+SDETKAVG+IIESILQCALDF
Sbjct: 1050 SHVSWCRFLHSLQHKVKDMMDLESVHTEYLADSLSICFLSDETKAVGSIIESILQCALDF 1109

Query: 721  RSCLTVGAWDTRSEQGNSLGRLSTINISQVLSIKQKFDRSLKELHFCYIREPKH 774
            RSCLT+GA      +G+ LG LSTINISQVLSIKQKF+RSL ELH CY++EP+H
Sbjct: 1110 RSCLTIGAC-----RGD-LGELSTINISQVLSIKQKFERSLNELHVCYVKEPRH 1157


>Medtr5g004880.2 | Spc97/Spc98 family of spindle pole body (SBP)
            component | HC | chr5:175920-164883 | 20130731
          Length = 1187

 Score = 1061 bits (2743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/774 (70%), Positives = 606/774 (78%), Gaps = 19/774 (2%)

Query: 1    MVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGPSFDKGGETLDKLAQLLSENKSII 60
            MV ARESYYKRMN KIES LSSLE+RYQQ  MHA   SFD    TLDKL QL+SE++ I+
Sbjct: 402  MVLARESYYKRMNEKIESLLSSLEVRYQQVPMHAPVSSFDNDVGTLDKLGQLMSEDEPIV 461

Query: 61   RPTDDEGISNVGFDNLGSDVSSTVDEFXXXXXXXXXXXXXXXXXXXXXXXXXQLSGWPCP 120
              T D+  SN+G +NL SDVSS  DE                          QLSGWPCP
Sbjct: 462  CSTADKSSSNMGSNNLDSDVSSMEDEMSLLEDMYGQSESSSLNSSDEQLESDQLSGWPCP 521

Query: 121  IVGHQNHLSALSFLKSTTLNSSIQNSSYLEKLGSDSHGICDKMNAIDILSKSSDEGMISG 180
              G QNHLSALSFLK TTLNSSIQNS + EK GSDSH ICDKM+A+D L KSS++GMIS 
Sbjct: 522  AAGQQNHLSALSFLKFTTLNSSIQNSRHHEKPGSDSHEICDKMDAVDHLMKSSNKGMISS 581

Query: 181  LMXXXXXXXXXXXXCKFSIQYRDSWIDSCSAMGHLLRKSFDEDEIVEQKVTEKHQGSLRY 240
             M             KFSI+ R S IDS SAM  LL+KSFD D  VEQK+TEKH  S++Y
Sbjct: 582  HMFDPQNPENSWYSSKFSIEQRGSCIDSYSAMDDLLKKSFDADGTVEQKMTEKHLQSMKY 641

Query: 241  SKLCHGVIAIQDTFNKEALSEDQPDSNALASSLYSLQPLKIGHQCNHPSINPFSMNPMLT 300
            S+LC   +A+ D+ + E LSEDQP +N  AS L   QPLK+ HQCN PSINPFSMNPMLT
Sbjct: 642  SQLCR--VAVSDSLSVETLSEDQPVNNTPASFLCDFQPLKVDHQCNLPSINPFSMNPMLT 699

Query: 301  RNALLHPMGKNEEKCKADSEQTWPYFNFSTVEDPCKVYMNKLPTNSRCGHASSFPEDSSA 360
            RN L         +  AD  Q +PYFNFSTVEDPCKVYM+KL T+S C +  SFP DS A
Sbjct: 700  RNVL--------PQQTADCAQPFPYFNFSTVEDPCKVYMDKLLTDSICTNTYSFPPDSCA 751

Query: 361  PTYVNRNNEHGEIGHDKEDGLVDVPKYCFDTSLDTMDHKQSILTVVSGGSSWERLLGSFE 420
             TY N+NN+HGEI    E+GLVD PKY FD SLD +DHKQ +LT  SGGSSW RLLGSF 
Sbjct: 752  STYGNQNNDHGEIDRGNEEGLVDEPKYGFDASLDVVDHKQYVLTDTSGGSSWGRLLGSFR 811

Query: 421  KTVPLHCDATQKQNLLSTFEIPLDIIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHL 480
            KTV   CDATQ+Q LLSTFE+PLDIII+KCL+QEIM+QYNYVSKL INVLEEAFKLQEHL
Sbjct: 812  KTV--DCDATQRQTLLSTFEMPLDIIIDKCLIQEIMVQYNYVSKLIINVLEEAFKLQEHL 869

Query: 481  LALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQGLLELSIQKSSCEQDTYKDQ 540
            LALRRYHFMELADWADLFILSLW H WS+TEA ERL EIQGLLELSIQKSSCEQDT K++
Sbjct: 870  LALRRYHFMELADWADLFILSLWRH-WSVTEATERLPEIQGLLELSIQKSSCEQDTNKNR 928

Query: 541  LFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKL 600
            LFVYMKG GKLPLSASAIG+RSFDFLGLGYHVDWPLCI+LTP ALKIYADIFSFLIQVKL
Sbjct: 929  LFVYMKGRGKLPLSASAIGLRSFDFLGLGYHVDWPLCIILTPAALKIYADIFSFLIQVKL 988

Query: 601  AIFSLTDVWCSLKDMVHTTGKNLDSELQECGAGHLNILIKMRHQISHFVSTLQQYVESQL 660
            A+FSLTDVWCSLKDM HTT K L++E  + GAGHLNIL+KMRHQISHFVSTLQQYVESQL
Sbjct: 989  ALFSLTDVWCSLKDMAHTTNKGLNAEPYQPGAGHLNILMKMRHQISHFVSTLQQYVESQL 1048

Query: 661  SHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDF 720
            SHVSWCRFLHSLQHKVKDMMDLESVH EYLADSL ICF+SDETKAVG+IIESILQCALDF
Sbjct: 1049 SHVSWCRFLHSLQHKVKDMMDLESVHTEYLADSLSICFLSDETKAVGSIIESILQCALDF 1108

Query: 721  RSCLTVGAWDTRSEQGNSLGRLSTINISQVLSIKQKFDRSLKELHFCYIREPKH 774
            RSCLT+GA      +G+ LG LSTINISQVLSIKQKF+RSL ELH CY++EP+H
Sbjct: 1109 RSCLTIGAC-----RGD-LGELSTINISQVLSIKQKFERSLNELHVCYVKEPRH 1156


>Medtr7g093560.1 | tubulin gamma complex-associated protein | HC |
           chr7:37201001-37197287 | 20130731
          Length = 841

 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 30/273 (10%)

Query: 462 VSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQG 521
           + K  ++V+ E +K +EH LA++RY  +   D+   +++ +   + S+        ++ G
Sbjct: 477 IDKHLLDVIYERYKFKEHCLAIKRYLLLGQGDFVQ-YLMDIVGPELSVPANTISSFKLAG 535

Query: 522 LLELSIQKSSCEQDT--YKDQLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIV 579
           LLE +I+ S+ + D     D+L V M  H          G R +D   L Y    PL  V
Sbjct: 536 LLETAIRASNAQYDDPDILDRLRVKMMPHES--------GDRGWDVFSLEYDARVPLDTV 587

Query: 580 LTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLK----------DMVHTTGKNLDSELQE 629
            T   +  Y  IF+FL ++K    +L   W ++K           + H     L S L+ 
Sbjct: 588 FTESVMARYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNTFNRLQHAVKMQLVSALRR 647

Query: 630 CGAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEY 689
           C          +  +I+HF+S LQ Y+  ++  +SW  FL  ++   KD+ DL + H +Y
Sbjct: 648 CQV--------LWVEINHFISNLQYYIMFEVLEISWSNFLSEME-VAKDLDDLLAAHEKY 698

Query: 690 LADSLCICFMSDETKAVGNIIESILQCALDFRS 722
           +   +    + + ++++   +  I    L FRS
Sbjct: 699 MNSIVEKSLLGELSQSLYKSLIVIFDLILRFRS 731


>Medtr3g101230.1 | Spc97/Spc98 family of spindle pole body (SBP)
           component | HC | chr3:46567256-46577932 | 20130731
          Length = 1001

 Score = 65.5 bits (158), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 128/309 (41%), Gaps = 38/309 (12%)

Query: 433 QNL-LSTFEIPLDIIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHLLALRRYHFMEL 491
           QN+ L T  +PL +I++ CL   I  Q +Y+    +  L   ++L E L  LR  + +  
Sbjct: 618 QNVDLRTTPLPL-VIMQYCLTAYIQKQVDYIGVNMLLKLMNEWRLMEELAVLRAIYLLGS 676

Query: 492 ADWADLFILSLWHHKWSITEANERLSEIQGLLELSIQKSS-CEQDTYKDQLFV-----YM 545
            D    F   ++  K    E  +   E+  +L+ SI+ S+ C   +  D L V      +
Sbjct: 677 GDLLQHFSTVIFD-KLDKGETWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKNIV 735

Query: 546 KGHGKLPLSASAIG----------VRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFL 595
           +  G+   S S +G          +   D L   Y V WPL ++    A+K Y  +  FL
Sbjct: 736 ESDGEASTSGSVLGTHKSRVNNLGMNGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFL 795

Query: 596 IQVKLAIFSLTDV--WCSLKDMVHTTGKNLDSELQECGAGHLNILIKMRHQISHFVSTLQ 653
           ++VK A F L  V  W   K    TT       L E              ++ HFV    
Sbjct: 796 LKVKRAKFVLDKVRRWM-WKGRGSTTNNRKHHWLVE-------------QKLLHFVDAFH 841

Query: 654 QYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICF-MSDETKA-VGNIIE 711
           QYV  ++ H +W     S+    K + ++   H  Y+      CF + D+  A + + + 
Sbjct: 842 QYVMDRVYHSAWRELCESMT-VAKSLDEVIEAHEAYMLSIQRQCFVVPDKLGALIASRVN 900

Query: 712 SILQCALDF 720
            IL  ALDF
Sbjct: 901 IILGLALDF 909


>Medtr1g088410.1 | tubulin gamma complex-associated protein | HC |
           chr1:39524666-39532429 | 20130731
          Length = 739

 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 43/280 (15%)

Query: 476 LQEHLLALRRYHFMELADWADLFI-----LSLWHHKWSITEANERLSEIQGLLELSIQKS 530
           L  HL AL+ Y  +   D+   F+     L     + S  EA+     +    +L+  K+
Sbjct: 384 LNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEAD-----LMVPFQLASLKT 438

Query: 531 SCEQDTYKDQLFVYMKGHG--------KLPLSASA----------------IGVRSFDFL 566
             E+D Y  ++ + M  +G         +P + SA                + V  +D +
Sbjct: 439 IGEEDKYFSKVSLRMPSYGITVKPSLLNVPKATSAAADGISGASISNASSEMSVDGWDGI 498

Query: 567 GLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLKDMVHTT-GKNLDS 625
            L Y ++WPL +  T   L  Y  +F +L+++K     L  +W S+    H+   KN  S
Sbjct: 499 ALEYSIEWPLHLFFTQEVLSRYLKVFQYLLRLKRTQMELEKLWASVMHQYHSIFAKNKKS 558

Query: 626 E-----LQECGAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMM 680
           +     + +        + ++R  ++  +  LQ Y++  +    W   L S      D  
Sbjct: 559 DQDKSPITQQRDQRFRSMWRVREHMAFLIRNLQFYIQVDVIESQW-NILQSHIQDSHDFT 617

Query: 681 DLESVHMEYLADSLCICFMSDETKAVGNIIESILQCALDF 720
           +L   H EYL+  +   F+  +  +V  I++ I++  L F
Sbjct: 618 ELVGFHQEYLSALISQTFL--DIGSVSRILDGIMKLCLQF 655