Miyakogusa Predicted Gene

Lj1g3v0027700.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0027700.5 tr|G7ZVA2|G7ZVA2_MEDTR Gamma-tubulin complex
component OS=Medicago truncatula GN=MTR_023s0007 PE=4
S,69.58,0,seg,NULL; Spc97_Spc98,Spc97/Spc98; SPC97 / SPC98 FAMILY
PROTEIN,NULL; GAMMA TUBULIN COMPLEX PROTEIN,,CUFF.25285.5
         (775 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G43610.1 | Symbols:  | Spc97 / Spc98 family of spindle pole b...   476   e-134
AT5G06680.1 | Symbols: SPC98, ATGCP3, ATSPC98, GCP3 | spindle po...    89   9e-18
AT3G53760.1 | Symbols: GCP4, ATGCP4 | GAMMA-TUBULIN COMPLEX PROT...    75   2e-13
AT1G80260.1 | Symbols: emb1427 | Spc97 / Spc98 family of spindle...    62   2e-09

>AT3G43610.1 | Symbols:  | Spc97 / Spc98 family of spindle pole body
            (SBP) component | chr3:15517772-15523927 REVERSE
            LENGTH=1207
          Length = 1207

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/510 (50%), Positives = 340/510 (66%), Gaps = 21/510 (4%)

Query: 267  NALASSLYSLQPLKIGHQCNHPSINPFSMNPMLTRNALLHPMGKNEEKCKADSEQTWPYF 326
            N L+S L  ++  K+    N+P+ +  SMNP L R   L   G   ++ +  S    P+F
Sbjct: 687  NCLSSKLDLMKDTKV----NYPN-DVLSMNP-LVRCDFLRKHGNTNKRNQGKS---LPWF 737

Query: 327  NFSTVEDPCKVYMNKLPTNSRCGHASSFPEDSSAPTYVNRNNEHG-EIGHDKEDGLVDVP 385
            +FS V+DP K  + ++P          F ++S +P    +++ H  +   D ED  V   
Sbjct: 738  DFSAVDDPSKTCITRIPVRV----PIDFQKESHSPQTDRKSHRHANQERFDVEDPKVSSS 793

Query: 386  KYCFDTSLDTMDHKQSILTVVSGGSSWERLLGSFEKTVPLHCDATQKQNLLSTFEIPLDI 445
            +          + K +      GG  WE +L            + ++Q+   TFE+PLD 
Sbjct: 794  QLSSGIKGCAEEKKSNAF----GGGRWESMLRR-SNNPETSAFSDRRQDSSGTFELPLDF 848

Query: 446  IIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHH 505
            +I+KCLLQEI LQYN+VSKL I +LEE F LQEHLLALRRYHFMELADWAD+F++SLWHH
Sbjct: 849  VIDKCLLQEIHLQYNFVSKLAIKLLEEGFGLQEHLLALRRYHFMELADWADVFVVSLWHH 908

Query: 506  KWSITEANERLSEIQGLLELSIQKSSCEQDTYKDQLFVYMKGHGKLPLSASAIGVRSFDF 565
            KW +TEA++R++EIQG LE SIQ+SSCE+D  KD++F+Y K  G + +  S IGVRSFDF
Sbjct: 909  KWLVTEADKRIAEIQGFLESSIQRSSCERDICKDRIFLY-KRQGTMHIPPSTIGVRSFDF 967

Query: 566  LGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLKDMVHTTGKNLDS 625
            L LGY VDWP+ I+LT  AL  YAD+FSFL+QVKLA + LTDVWCSLKD+ H   +  + 
Sbjct: 968  LRLGYRVDWPISIILTCDALTAYADVFSFLVQVKLAAYVLTDVWCSLKDVRHMMHEKKEK 1027

Query: 626  ELQECGAGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESV 685
             L++     LNIL+K+RHQ++HFV+ LQQYV S+LSHVSW +FLHSL++KVKDMMDLESV
Sbjct: 1028 ILKQ-ELRWLNILMKLRHQVNHFVTALQQYVHSELSHVSWSKFLHSLKNKVKDMMDLESV 1086

Query: 686  HMEYLADSLCICFMSDETKAVGNIIESILQCALDFRSCLTVGAWDTRSEQGNSLGRLSTI 745
            HM YL+++L ICF+SDET+ + NIIE+ILQCALDFRSCL  G   T     +S  +   I
Sbjct: 1087 HMAYLSEALRICFLSDETQIISNIIENILQCALDFRSCLPRGIQSTDRVPNDSWTKTLGI 1146

Query: 746  NISQVLSIKQKFDRSLKELHFCYIREPKHG 775
            N SQV+ +KQ FD+ LKELH C++R PKHG
Sbjct: 1147 NTSQVMMVKQNFDKELKELHKCHLRSPKHG 1176


>AT5G06680.1 | Symbols: SPC98, ATGCP3, ATSPC98, GCP3 | spindle pole
           body component 98 | chr5:2056741-2059369 FORWARD
           LENGTH=838
          Length = 838

 Score = 89.4 bits (220), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 22/269 (8%)

Query: 462 VSKLTINVLEEAFKLQEHLLALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQG 521
           + K  ++VL + +K +EH LA++RY  +   D+   +++ +   K S    N    E+ G
Sbjct: 483 IDKHLLDVLYKRYKFKEHCLAIKRYLLLGQGDFVQ-YLMDIVGPKLSEPANNISSFELAG 541

Query: 522 LLELSIQKSSCEQDTYK--DQLFVYMKGHGKLPLSASAIGVRSFDFLGLGYHVDWPLCIV 579
            LE +I+ S+ + D     D+L V M  HG         G R +D   L Y    PL  V
Sbjct: 542 FLEAAIRASNAQYDDRDMLDRLRVKMMPHGS--------GDRGWDVFSLEYEARVPLDTV 593

Query: 580 LTPPALKIYADIFSFLIQVKLAIFSLTDVWCSLKDMVHTTGKNLDSELQECGAGHLNILI 639
            T   L  Y  +F+FL ++K    +L  +W ++K    T+    +S ++   +  L +L 
Sbjct: 594 FTESVLSKYLRVFNFLWKLKRVEHALIGIWKTMKPNCITS----NSFVKLQSSVKLQLLS 649

Query: 640 KMR------HQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADS 693
            +R      ++++HFV+  Q Y+  ++  VSW  F   ++   KD+ DL + H +YL   
Sbjct: 650 ALRRCQVLWNEMNHFVTNFQYYIMFEVLEVSWSNFSKEME-AAKDLDDLLAAHEKYLNAI 708

Query: 694 LCICFMSDETKAVGNIIESILQCALDFRS 722
           +    + ++++ +   +  + +  L FRS
Sbjct: 709 VGKSLLGEQSQTIRESLFVLFELILRFRS 737


>AT3G53760.1 | Symbols: GCP4, ATGCP4 | GAMMA-TUBULIN COMPLEX PROTEIN
           4 | chr3:19918182-19922264 REVERSE LENGTH=745
          Length = 745

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 134/314 (42%), Gaps = 42/314 (13%)

Query: 476 LQEHLLALRRYHFMELADWADLFILSLWHHKWSITEANERLSEIQGLLELSIQKSSCEQD 535
           L  HL AL+ Y  +E  D+   F+             +   S++    +L+  K+  E+D
Sbjct: 401 LNGHLKALKDYFLLEKGDFFQCFLEESRQLMRLPPRQSTGESDLMVPFQLAATKTIAEED 460

Query: 536 TYKDQLFVYMKGHGKLPLSASAIGVRS------------------FDFLGLGYHVDWPLC 577
            Y  ++ + M   G    S+ A  VRS                  +D + L Y VDWP+ 
Sbjct: 461 KYFSRVSLRMPSFGVTVRSSQADMVRSKVSLTGKANLTSDTSVDGWDAIALEYSVDWPMQ 520

Query: 578 IVLTPPALKIYADIFSFLIQVKLAIFSLTDVWCSL--KDMVHTTGKNLD----SELQECG 631
           +  T   L  Y  +F +LI++K     L   W S+  +D + +     D    S  Q+  
Sbjct: 521 LFFTQEVLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGLNGSTSQQRR 580

Query: 632 AGHLNILIKMRHQISHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLA 691
            G +  + ++R  ++  +  LQ Y++  +    W + L +  H  +D  +L   H EYL+
Sbjct: 581 QG-IRPMWRVREHMAFLIRNLQFYIQVDVIESQW-KVLQTHIHDSQDFTELVGFHQEYLS 638

Query: 692 DSLCICFMSDETKAVGNIIESILQCALDFRSCLTVGAWDTRSEQGNSLGRLSTINISQVL 751
             +   F+  +  +V  I++SI++  L F        W+  +++ N        N S++ 
Sbjct: 639 ALISQSFL--DIGSVSRILDSIMKLCLQF-------CWNIENQESNP-------NTSELE 682

Query: 752 SIKQKFDRSLKELH 765
           +I ++F++    L+
Sbjct: 683 NIAEEFNKKSNSLY 696


>AT1G80260.1 | Symbols: emb1427 | Spc97 / Spc98 family of spindle
           pole body (SBP) component | chr1:30175924-30180511
           FORWARD LENGTH=995
          Length = 995

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 44/307 (14%)

Query: 442 PLD-----IIIEKCLLQEIMLQYNYVSKLTINVLEEAFKLQEHLLALRRYHFMELADWAD 496
           P+D     +I+++C    I  Q +Y+ K+ ++ L   +KL   L  LR  + +   D   
Sbjct: 615 PMDTRLPVVIMQECFTIYIRRQVDYIGKVILSKLMNDWKLMHELAVLRAIYLLGSGDLLQ 674

Query: 497 LFILSLWHHKWSITEANERLSEIQGLLELSIQKSS-CEQDTYKDQLFVYMKGHGK----- 550
            F+  ++        +N+   E+  +L+ SI+ S+     +  D L V +    +     
Sbjct: 675 HFLTVIFDRLGKGESSNDDF-ELNIILQESIRNSADAMLLSSPDSLVVSISREDRDKDDK 733

Query: 551 ---LPLSAS------AIGVRSFDFLGLGYHVDWPLCIVLTPPALKIYADIFSFLIQVKLA 601
              +PLS++      + G+   + L   Y V WPL ++    A+K Y  +  FL++VK A
Sbjct: 734 GDIIPLSSTRKSRVNSFGIDCLESLKFTYKVPWPLELIANSEAIKKYNQVMGFLLKVKRA 793

Query: 602 IFSLTD----VWCSLKDMVHTTGKNLDSELQECGAGHLNILIKMRHQISHFVSTLQQYVE 657
            + L      +W          GK   +++++    H  +L     ++ +FV    QYV 
Sbjct: 794 KYVLDKARRWMW---------KGKGSATKIRK----HHWLL---EQKLLNFVDAFHQYVM 837

Query: 658 SQLSHVSWCRFLHSLQHKVKDMMDLESVHMEYLADSLCICFMSDET--KAVGNIIESILQ 715
            ++ H +W R L     K   + ++  VH  YL      CF+  E     + + I  IL 
Sbjct: 838 DRVYHTAW-RELCEAMVKAGSLDEVIYVHETYLLSIQRQCFVVQEKLWAIIASRINMILG 896

Query: 716 CALDFRS 722
            AL+F S
Sbjct: 897 LALEFYS 903