Miyakogusa Predicted Gene

Lj1g3v0015490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0015490.1 Non Characterized Hit- tr|I1JB04|I1JB04_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,61.3,0,seg,NULL;
Spc97_Spc98,Spc97/Spc98; SPC97 / SPC98 FAMILY PROTEIN,NULL; GAMMA
TUBULIN COMPLEX PROTEIN,,gene.g28700.t1.1
         (886 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g004880.1 | Spc97/Spc98 family of spindle pole body (SBP) ...   890   0.0  
Medtr5g004880.2 | Spc97/Spc98 family of spindle pole body (SBP) ...   890   0.0  

>Medtr5g004880.1 | Spc97/Spc98 family of spindle pole body (SBP)
           component | HC | chr5:175920-164883 | 20130731
          Length = 1188

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/914 (55%), Positives = 579/914 (63%), Gaps = 95/914 (10%)

Query: 8   GSLLENLKLQDPWLPPTTWESIPCESXXXXXXXXPTSTCSKSNQTLSTLSVSPHISNSSS 67
            SLL+NLKL DPWLPP TWE               +++ S SNQT  TLS          
Sbjct: 7   ASLLQNLKLHDPWLPPNTWEQRTPTPLLPLQLSSNSNSNSNSNQT--TLS---------- 54

Query: 68  TFLVQRYAFRSELTTCLFEIWPPQESSLVRLVMNAMQGVKSSLISIQNLYTIFSNDPADR 127
                                   ESSLVRLVMNAM G KSS+I+I NL  IFS+   + 
Sbjct: 55  ------------------------ESSLVRLVMNAMLGSKSSIIAIHNLSPIFSSHHPNT 90

Query: 128 TFLQIPNLWNRASTTHSLANLLISIGCTGSLVFLLRQFVYYFTNPPHNHNISQHFPPYTL 187
           TFL   +LW RASTTHS +N+L SI  T SLVFLLR FV +FT       IS   PP TL
Sbjct: 91  TFL---HLWYRASTTHSFSNILQSIASTASLVFLLRHFVDHFT-------IS--LPPCTL 138

Query: 188 VNQAFAVAVGKVLEAYISGLDTIHASITLRRSSKHHVGLSVSGCLKSVVHSEITLLEFYL 247
           VNQAFAVAVGKVLE YIS LDTIH+S+  RR+S+  V  S S C  SV HSEITLLE YL
Sbjct: 139 VNQAFAVAVGKVLEGYISSLDTIHSSLIFRRASEIPVDFSASSCFNSVSHSEITLLELYL 198

Query: 248 HTKELRTQIQALASICNLQNWVLCFSDTAFEDLITKATSEFSNFSRGGDL---------- 297
           HTK+LR  IQALASICNL  W  C SDT FE++I KATSEF++F RGG L          
Sbjct: 199 HTKQLRIHIQALASICNLLKWAHCVSDTDFENVIAKATSEFADFYRGGSLLTFLYHQLQV 258

Query: 298 -------------------------SWIFKAEIHDPYKEFIVQNVECLPHQSHFKAGKSV 332
                                    SWIFKAEIHDPYKEFIV+N+ CL  +SH KAG S 
Sbjct: 259 ADSAHCTLLKFLFLQSCEPYCGFIRSWIFKAEIHDPYKEFIVENIGCLSPKSHVKAGNSA 318

Query: 333 DLPLASIKVRDGVLVPEFLKDLLVPLVRAGXXXXXXXXXXXXCIHVAAGGHSSDDFLPCW 392
           D P ASI++RDGV +P FLKD LVPLVRAG            CI VAAG HSSDDFLPCW
Sbjct: 319 DFPSASIRLRDGVPIPGFLKDSLVPLVRAGQQLQVLLKLLELCIDVAAGQHSSDDFLPCW 378

Query: 393 XXXXXXXXXXXXPLTFRKDIIETMVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGP 452
                       PLTF KD I+ MV ARESYYKRMN KIES LSSLE+RYQQ  MHA   
Sbjct: 379 SGFSSNSLSYFSPLTFNKDTIDNMVLARESYYKRMNEKIESLLSSLEVRYQQVPMHAPVS 438

Query: 453 SFDKGGETLDKLAQLLSENKSIIRPTDDEGISNVGFDNLGSDVSSTVDEFXXXXXXXXXX 512
           SFD    TLDKL QL+SE++ I+  T D+  SN+G +NL SDVSS  DE           
Sbjct: 439 SFDNDVGTLDKLGQLMSEDEPIVCSTADKSSSNMGSNNLDSDVSSMEDEMSLLEDMYGQS 498

Query: 513 XXXXXXXXXXXXXXXQLSGWPCPIVGHQNHLSALSFLKSTTLNSSIQNSSYLEKLGSDSH 572
                          QLSGWPCP  G QNHLSALSFLK TTLNSSIQNS + EK GSDSH
Sbjct: 499 ESSSLNSSDEQLESDQLSGWPCPAAGQQNHLSALSFLKFTTLNSSIQNSRHHEKPGSDSH 558

Query: 573 GICDKMNAIDILSKSSDEGMISGLMXXXXXXXXXXXXCKFSIQYRDSWIDSCSAMGHLLR 632
            ICDKM+A+D L KSS++GMIS  M             KFSI+ R S IDS SAM  LL+
Sbjct: 559 EICDKMDAVDHLMKSSNKGMISSHMFDPQNPENSWYSSKFSIEQRGSCIDSYSAMDDLLK 618

Query: 633 KSFDEDEIVEQKVTEKHQGSLRYSKLCHGVIAIQDTFNKEALSEDQPDSNALASSLYSLQ 692
           KSFD D  VEQK+TEKH  S++YS+LC   +A+ D+ + E LSEDQP +N  AS L   Q
Sbjct: 619 KSFDADGTVEQKMTEKHLQSMKYSQLCR--VAVSDSLSVETLSEDQPVNNTPASFLCDFQ 676

Query: 693 PLKIGHQCNHPSINPFSMNPMLTRNALLHPMGKNEEKCKADSEQTWPYFNFSTVEDPCKV 752
           PLK+ HQCN PSINPFSMNPMLTRN L         +  AD  Q +PYFNFSTVEDPCKV
Sbjct: 677 PLKVDHQCNLPSINPFSMNPMLTRNVL--------PQQTADCAQPFPYFNFSTVEDPCKV 728

Query: 753 YMNKLPTNSRCGHASSFPEDSSAPTYVNRNNEHGEIGHDKEDGLVDVPKYCFDTSLDTMD 812
           YM+KL T+S C +  SFP DS A TY N+NN+HGEI    E+GLVD PKY FD SLD +D
Sbjct: 729 YMDKLLTDSICTNTYSFPPDSCASTYGNQNNDHGEIDRGNEEGLVDEPKYGFDASLDVVD 788

Query: 813 HKQSILTVVSGGSSWERLLGSFEKTVPLHCDATQKQNLLSTFEIPLDIIIEKCLLQEIML 872
           HKQ +LT  SGGSSW RLLGSF KTV   CDATQ+Q LLSTFE+PLDIII+KCL+QEIM+
Sbjct: 789 HKQYVLTDTSGGSSWGRLLGSFRKTV--DCDATQRQTLLSTFEMPLDIIIDKCLIQEIMV 846

Query: 873 QYPYLRVYFGNLID 886
           QY Y+     N+++
Sbjct: 847 QYNYVSKLIINVLE 860


>Medtr5g004880.2 | Spc97/Spc98 family of spindle pole body (SBP)
           component | HC | chr5:175920-164883 | 20130731
          Length = 1187

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/914 (55%), Positives = 579/914 (63%), Gaps = 95/914 (10%)

Query: 8   GSLLENLKLQDPWLPPTTWESIPCESXXXXXXXXPTSTCSKSNQTLSTLSVSPHISNSSS 67
            SLL+NLKL DPWLPP TWE               +++ S SNQT  TLS          
Sbjct: 7   ASLLQNLKLHDPWLPPNTWEQRTPTPLLPLQLSSNSNSNSNSNQT--TLS---------- 54

Query: 68  TFLVQRYAFRSELTTCLFEIWPPQESSLVRLVMNAMQGVKSSLISIQNLYTIFSNDPADR 127
                                   ESSLVRLVMNAM G KSS+I+I NL  IFS+   + 
Sbjct: 55  ------------------------ESSLVRLVMNAMLGSKSSIIAIHNLSPIFSSHHPNT 90

Query: 128 TFLQIPNLWNRASTTHSLANLLISIGCTGSLVFLLRQFVYYFTNPPHNHNISQHFPPYTL 187
           TFL   +LW RASTTHS +N+L SI  T SLVFLLR FV +FT       IS   PP TL
Sbjct: 91  TFL---HLWYRASTTHSFSNILQSIASTASLVFLLRHFVDHFT-------IS--LPPCTL 138

Query: 188 VNQAFAVAVGKVLEAYISGLDTIHASITLRRSSKHHVGLSVSGCLKSVVHSEITLLEFYL 247
           VNQAFAVAVGKVLE YIS LDTIH+S+  RR+S+  V  S S C  SV HSEITLLE YL
Sbjct: 139 VNQAFAVAVGKVLEGYISSLDTIHSSLIFRRASEIPVDFSASSCFNSVSHSEITLLELYL 198

Query: 248 HTKELRTQIQALASICNLQNWVLCFSDTAFEDLITKATSEFSNFSRGGDL---------- 297
           HTK+LR  IQALASICNL  W  C SDT FE++I KATSEF++F RGG L          
Sbjct: 199 HTKQLRIHIQALASICNLLKWAHCVSDTDFENVIAKATSEFADFYRGGSLLTFLYHQLQV 258

Query: 298 -------------------------SWIFKAEIHDPYKEFIVQNVECLPHQSHFKAGKSV 332
                                    SWIFKAEIHDPYKEFIV+N+ CL  +SH KAG S 
Sbjct: 259 ADSAHCTLLKFLFLQSCEPYCGFIRSWIFKAEIHDPYKEFIVENIGCLSPKSHVKAGNSA 318

Query: 333 DLPLASIKVRDGVLVPEFLKDLLVPLVRAGXXXXXXXXXXXXCIHVAAGGHSSDDFLPCW 392
           D P ASI++RDGV +P FLKD LVPLVRAG            CI VAAG HSSDDFLPCW
Sbjct: 319 DFPSASIRLRDGVPIPGFLKDSLVPLVRAGQQLQVLLKLLELCIDVAAGQHSSDDFLPCW 378

Query: 393 XXXXXXXXXXXXPLTFRKDIIETMVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGP 452
                       PLTF KD I+ MV ARESYYKRMN KIES LSSLE+RYQQ  MHA   
Sbjct: 379 SGFSSNSLSYFSPLTFNKDTIDNMVLARESYYKRMNEKIESLLSSLEVRYQQVPMHAPVS 438

Query: 453 SFDKGGETLDKLAQLLSENKSIIRPTDDEGISNVGFDNLGSDVSSTVDEFXXXXXXXXXX 512
           SFD    TLDKL QL+SE++ I+  T D+  SN+G +NL SDVSS  DE           
Sbjct: 439 SFDNDVGTLDKLGQLMSEDEPIVCSTADKSSSNMGSNNLDSDVSSMEDEMSLLEDMYGQS 498

Query: 513 XXXXXXXXXXXXXXXQLSGWPCPIVGHQNHLSALSFLKSTTLNSSIQNSSYLEKLGSDSH 572
                          QLSGWPCP  G QNHLSALSFLK TTLNSSIQNS + EK GSDSH
Sbjct: 499 ESSSLNSSDEQLESDQLSGWPCPAAGQQNHLSALSFLKFTTLNSSIQNSRHHEKPGSDSH 558

Query: 573 GICDKMNAIDILSKSSDEGMISGLMXXXXXXXXXXXXCKFSIQYRDSWIDSCSAMGHLLR 632
            ICDKM+A+D L KSS++GMIS  M             KFSI+ R S IDS SAM  LL+
Sbjct: 559 EICDKMDAVDHLMKSSNKGMISSHMFDPQNPENSWYSSKFSIEQRGSCIDSYSAMDDLLK 618

Query: 633 KSFDEDEIVEQKVTEKHQGSLRYSKLCHGVIAIQDTFNKEALSEDQPDSNALASSLYSLQ 692
           KSFD D  VEQK+TEKH  S++YS+LC   +A+ D+ + E LSEDQP +N  AS L   Q
Sbjct: 619 KSFDADGTVEQKMTEKHLQSMKYSQLCR--VAVSDSLSVETLSEDQPVNNTPASFLCDFQ 676

Query: 693 PLKIGHQCNHPSINPFSMNPMLTRNALLHPMGKNEEKCKADSEQTWPYFNFSTVEDPCKV 752
           PLK+ HQCN PSINPFSMNPMLTRN L         +  AD  Q +PYFNFSTVEDPCKV
Sbjct: 677 PLKVDHQCNLPSINPFSMNPMLTRNVL--------PQQTADCAQPFPYFNFSTVEDPCKV 728

Query: 753 YMNKLPTNSRCGHASSFPEDSSAPTYVNRNNEHGEIGHDKEDGLVDVPKYCFDTSLDTMD 812
           YM+KL T+S C +  SFP DS A TY N+NN+HGEI    E+GLVD PKY FD SLD +D
Sbjct: 729 YMDKLLTDSICTNTYSFPPDSCASTYGNQNNDHGEIDRGNEEGLVDEPKYGFDASLDVVD 788

Query: 813 HKQSILTVVSGGSSWERLLGSFEKTVPLHCDATQKQNLLSTFEIPLDIIIEKCLLQEIML 872
           HKQ +LT  SGGSSW RLLGSF KTV   CDATQ+Q LLSTFE+PLDIII+KCL+QEIM+
Sbjct: 789 HKQYVLTDTSGGSSWGRLLGSFRKTV--DCDATQRQTLLSTFEMPLDIIIDKCLIQEIMV 846

Query: 873 QYPYLRVYFGNLID 886
           QY Y+     N+++
Sbjct: 847 QYNYVSKLIINVLE 860