Miyakogusa Predicted Gene

Lj1g3v0015490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0015490.1 Non Chatacterized Hit- tr|I1JB04|I1JB04_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,61.3,0,seg,NULL;
Spc97_Spc98,Spc97/Spc98; SPC97 / SPC98 FAMILY PROTEIN,NULL; GAMMA
TUBULIN COMPLEX PROTEIN,,gene.g28700.t1.1
         (886 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G43610.1 | Symbols:  | Spc97 / Spc98 family of spindle pole b...   277   2e-74

>AT3G43610.1 | Symbols:  | Spc97 / Spc98 family of spindle pole body
           (SBP) component | chr3:15517772-15523927 REVERSE
           LENGTH=1207
          Length = 1207

 Score =  277 bits (708), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 180/440 (40%), Positives = 237/440 (53%), Gaps = 65/440 (14%)

Query: 95  LVRLVMNAMQGVKSSLISIQNLYTIFSNDPADRTFLQIPNLWNRASTTHSLANLLISIGC 154
           LVRL +NA+QGV+SSLISI+ L + F ++PADRTF +IP+LW+R S+T +L  +L  IGC
Sbjct: 55  LVRLALNALQGVESSLISIEQLSSAFCSEPADRTFHKIPSLWHRLSSTDALGQILRDIGC 114

Query: 155 TGSLVFLLRQFVYYFTN----------------PPHNHNISQHFPPYTLVNQAFAVAVGK 198
            GSLVFLL +FV +FT                    N  ++     YTLVNQAFA+AV +
Sbjct: 115 FGSLVFLLHKFVDHFTRLNLDVESAVEGQGSCKIGENEEVNNK-SCYTLVNQAFAIAVRR 173

Query: 199 VLEAYISGLDTIHASITLRRSSK----HHVGLSVSGCLKSVVHSEITLLEFYLHTKELRT 254
           VLE YISGLDT+ ASI LRRSS        G S  G L +VVH +ITLLE +LHT+ELRT
Sbjct: 174 VLEGYISGLDTLCASIELRRSSNIVDGSDHGSSRLGSLTNVVHPKITLLEVFLHTRELRT 233

Query: 255 QIQALASICNLQNWVLCFSDTAFEDLITKATSEFSNFSRGGDL----------------- 297
           QI+ALA+IC+L +  L +  + +E LIT+AT+ F  F RG DL                 
Sbjct: 234 QIEALANICDLYDIALSYCASPWECLITEATTRFHGFYRGSDLLTYLYSQLQVADPTHSA 293

Query: 298 ------------------SWIFKAEIHDPYKEFIVQNVECLPHQSHFKAGKSVDLPLASI 339
                             SW+FKAE++DP+KEFI   VEC    + F   K    PL S+
Sbjct: 294 MLKFLFLKTCEPYCEFIRSWMFKAELNDPHKEFI---VECRSESTSFSWNKPGISPLKSV 350

Query: 340 KVRDGVLVPEFLKDLLVPLVRAGXXXXXXXXXXXXCIHVAAGGHSSDDFLPCWXXXXXXX 399
           + R G LVP FL   L P+VRAG            C   A+G  +  D LPCW       
Sbjct: 351 RERGG-LVPCFLNGFLEPIVRAGQQLQVITKLLELCNLPASGHKNYTDLLPCWTYFSTTS 409

Query: 400 XXXXXPLTFRKDIIETMVFARESYYKRMNGKIESFLSSLEIRYQQAAMHASGP-SFDKGG 458
                P+TF K  IE M+  R+ YY+ M  K+  F    E+   Q     S P S+  G 
Sbjct: 410 PGYPSPITFSKLHIEVMIKKRDDYYRMMQEKLGDFSEKFEVFPGQVPGAISLPISYGDG- 468

Query: 459 ETLDKLAQLLSENKSIIRPT 478
              DK +   + ++S++ P+
Sbjct: 469 ---DKNSIYFTLDESLLIPS 485



 Score = 68.2 bits (165), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 682 NALASSLYSLQPLKIGHQCNHPSINPFSMNPMLTRNALLHPMGKNEEKCKADSEQTWPYF 741
           N L+S L  ++  K+    N+P+ +  SMNP L R   L   G   ++ +  S    P+F
Sbjct: 687 NCLSSKLDLMKDTKV----NYPN-DVLSMNP-LVRCDFLRKHGNTNKRNQGKS---LPWF 737

Query: 742 NFSTVEDPCKVYMNKLPTNSRCGHASSFPEDSSAPTYVNRNNEHG-EIGHDKEDGLVDVP 800
           +FS V+DP K  + ++P          F ++S +P    +++ H  +   D ED  V   
Sbjct: 738 DFSAVDDPSKTCITRIPVRV----PIDFQKESHSPQTDRKSHRHANQERFDVEDPKVSSS 793

Query: 801 KYCFDTSLDTMDHKQSILTVVSGGSSWERLLGSFEKTVPLHCDATQKQNLLSTFEIPLDI 860
           +          + K +      GG  WE +L            + ++Q+   TFE+PLD 
Sbjct: 794 QLSSGIKGCAEEKKSNAF----GGGRWESMLRR-SNNPETSAFSDRRQDSSGTFELPLDF 848

Query: 861 IIEKCLLQEIMLQYPYL 877
           +I+KCLLQEI LQY ++
Sbjct: 849 VIDKCLLQEIHLQYNFV 865