Miyakogusa Predicted Gene

Lj0g3v0363249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0363249.1 Non Chatacterized Hit- tr|I1N7I0|I1N7I0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,48.39,4e-17,RIBOSOMALS21,Ribosomal protein S21;
Ribosomal_S21,Ribosomal protein S21; seg,NULL; S21p: ribosomal
p,CUFF.25039.1
         (164 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27160.1 | Symbols: GHS1 | Ribosomal protein S21 family prote...    78   3e-15

>AT3G27160.1 | Symbols: GHS1 | Ribosomal protein S21 family protein
           | chr3:10017531-10018854 FORWARD LENGTH=183
          Length = 183

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 39/62 (62%)

Query: 68  VVCPSLAYSNTLFFRSAYNVQXXXXXXXXXXXXXXXXXXXXMKAGVIQECKRRRFFENKQ 127
           V+CPSLAYSNTLFF S YNVQ                    M+ GVIQECKRRR+FENKQ
Sbjct: 68  VICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVMRTGVIQECKRRRYFENKQ 127

Query: 128 DE 129
           DE
Sbjct: 128 DE 129