Miyakogusa Predicted Gene

Lj0g3v0362679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362679.1 Non Chatacterized Hit- tr|A6MZQ5|A6MZQ5_ORYSI
Putative uncharacterized protein (Fragment) OS=Oryza
s,56.82,0.00000008,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,NODE_3082_length_822_cov_236.464722.path2.1
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11660.1                                                       184   1e-47
Glyma08g42630.1                                                       184   2e-47

>Glyma18g11660.1 
          Length = 144

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/97 (89%), Positives = 90/97 (92%)

Query: 8   INAGAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHEHCTH 67
           I  GAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHE CT 
Sbjct: 48  ILEGAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHEQCTQ 107

Query: 68  LGQGSPGVKFSYNHPSGRSHSVRTFIYRPVSVPTYCI 104
           LG+GS GVKFSYNHPSG SH+VRTF+YRP SVPTYCI
Sbjct: 108 LGEGSIGVKFSYNHPSGHSHTVRTFVYRPTSVPTYCI 144


>Glyma08g42630.1 
          Length = 144

 Score =  184 bits (467), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/94 (91%), Positives = 89/94 (94%)

Query: 11  GAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHEHCTHLGQ 70
           GAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHE CT LG+
Sbjct: 51  GAEVAVLCITKSGEVLNYQAFTDAKGIYTVAETMPESDRWDACLARPISSFHEQCTQLGE 110

Query: 71  GSPGVKFSYNHPSGRSHSVRTFIYRPVSVPTYCI 104
           GS GVKFSYNHPSG SH+VRTF+YRP SVPTYCI
Sbjct: 111 GSIGVKFSYNHPSGHSHTVRTFVYRPTSVPTYCI 144