Miyakogusa Predicted Gene

Lj0g3v0362679.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0362679.1 Non Chatacterized Hit- tr|A6MZQ5|A6MZQ5_ORYSI
Putative uncharacterized protein (Fragment) OS=Oryza
s,56.82,0.00000008,Pollen_Ole_e_I,Pollen Ole e 1
allergen/extensin,NODE_3082_length_822_cov_236.464722.path2.1
         (316 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61950 similar to UniRef100_A7P0T8 Cluster: Chromosome...   569   e-162

>gnl|LJGI|TC61950 similar to UniRef100_A7P0T8 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (83%)
          Length = 740

 Score =  569 bits (287), Expect = e-162
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  aggtgctgaggttgctgttctttgcatcaccaagtccggggaggttctaaattatcaggc 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aggtgctgaggttgctgttctttgcatcaccaagtccggggaggttctaaattatcaggc 307

                                                                       
Query: 90  atttactgatgctaaagggatatacacagtggcagagacaatgcctgagagtgaccgttg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atttactgatgctaaagggatatacacagtggcagagacaatgcctgagagtgaccgttg 367

                                                                       
Query: 150 ggatgcatgtcttgctcgacccatcagcagtttccatgagcactgcactcatcttggtca 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggatgcatgtcttgctcgacccatcagcagtttccatgagcactgcactcatcttggtca 427

                                                                       
Query: 210 gggcagcccaggggtgaaattcagttacaatcacccatcaggacgttcacattctgtcag 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gggcagcccaggggtgaaattcagttacaatcacccatcaggacgttcacattctgtcag 487

                                                          
Query: 270 aacctttatttatcgacctgtcagtgttccaacatactgcatttgat 316
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aacctttatttatcgacctgtcagtgttccaacatactgcatttgat 534