Miyakogusa Predicted Gene

Lj0g3v0362089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0362089.1 Non Chatacterized Hit- tr|K4CHM5|K4CHM5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,61.25,4e-18,PALP,Tryptophan synthase beta subunit-like
PLP-dependent enzymes superfamily; CYSTEINE SYNTHASE,NULL,CUFF.24944.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01780.2                                                        82   1e-16
Glyma14g01780.1                                                        81   2e-16

>Glyma14g01780.2 
          Length = 358

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/41 (90%), Positives = 40/41 (97%)

Query: 39 GIVEAIGNSPLIRINSLSDATGCQILGKCEFLNPGGSVKDR 79
          G+V+AIGN+PLIRINSLS ATGCQILGKCEFLNPGGSVKDR
Sbjct: 46 GLVDAIGNTPLIRINSLSAATGCQILGKCEFLNPGGSVKDR 86


>Glyma14g01780.1 
          Length = 425

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/41 (90%), Positives = 40/41 (97%)

Query: 39 GIVEAIGNSPLIRINSLSDATGCQILGKCEFLNPGGSVKDR 79
          G+V+AIGN+PLIRINSLS ATGCQILGKCEFLNPGGSVKDR
Sbjct: 46 GLVDAIGNTPLIRINSLSAATGCQILGKCEFLNPGGSVKDR 86