Miyakogusa Predicted Gene

Lj0g3v0354579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354579.1 tr|G7JCA1|G7JCA1_MEDTR Leucine-rich
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g108360,82.79,0,seg,NULL,CUFF.24413.1
         (812 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108360.1 | zinc finger protein, putative | HC | chr3:5008...  1395   0.0  

>Medtr3g108360.1 | zinc finger protein, putative | HC |
            chr3:50087847-50052059 | 20130731
          Length = 2469

 Score = 1395 bits (3610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 686/816 (84%), Positives = 722/816 (88%), Gaps = 5/816 (0%)

Query: 1    MVNVIISLLHMDNTSVNLMHCGSPGSDSKLINACXXXXXXXXXXEGGNKMVISFTGLLLD 60
            MV+VIISLLHMDN S N MHCGS  SDS L NA           EGGNKMVISFT LLLD
Sbjct: 611  MVDVIISLLHMDNISANSMHCGSQESDSTLANASSSGNNSSARNEGGNKMVISFTSLLLD 670

Query: 61   ILRRNIPSSMVELENTLDGGENTTSSQVLEWRMSISKRFIEEFEWRLSILQHLLPLSERQ 120
             LR+NIPSS+VELENTLDG   TTS Q LEWRMSIS RFIEE+EWRLSILQHLLPLSERQ
Sbjct: 671  TLRQNIPSSVVELENTLDGDVRTTSRQALEWRMSISTRFIEEWEWRLSILQHLLPLSERQ 730

Query: 121  WRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVDGACKKA 180
            WRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVD ACKK+
Sbjct: 731  WRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVDSACKKS 790

Query: 181  SVDDVVSRVQDLDFSSLRSQLGPLATILLCIDVAATSAKSAGMSQELLDQAQTMLSEIYP 240
            SVDDVVSRVQDLDFSSLRSQLGPL+TILLCIDVAATSAKSAGMSQ+LL+QAQ MLSEIYP
Sbjct: 791  SVDDVVSRVQDLDFSSLRSQLGPLSTILLCIDVAATSAKSAGMSQQLLNQAQIMLSEIYP 850

Query: 241  GGSPKVGSTYWDQILEVGVISVSRRLLKRLHEFLEQDNPPALQAILSGDIVITSVKESHR 300
            GGSPK GSTYWDQILEVGVISVSRRLLK L EFLEQD PP LQAILSG+IVITS KESHR
Sbjct: 851  GGSPKAGSTYWDQILEVGVISVSRRLLKCLQEFLEQDKPPTLQAILSGEIVITSSKESHR 910

Query: 301  QEQRERALALLHQMIEDAHTGKRQFLSGKLHNLARAVADEETEPSTARGEGLYADRGVIS 360
            QEQRERALALLHQMIEDAH GKRQFLSGKLHNLARAV DEETEP+  RGEG Y++R  IS
Sbjct: 911  QEQRERALALLHQMIEDAHVGKRQFLSGKLHNLARAVTDEETEPNATRGEGFYSERSFIS 970

Query: 361  NSDKDIVLGLGLRVDKQTPLSS----TGPQSAGYDIKDSGKRIFAPLSAKSVTYLSQFVL 416
            NSDKDI LGLGLRV K  PLSS    TGPQS+G+DIKDSGKRIF+PLS+K +TYLSQF+L
Sbjct: 971  NSDKDIALGLGLRVVKPIPLSSVGGETGPQSSGFDIKDSGKRIFSPLSSKPMTYLSQFIL 1030

Query: 417  HVAAIXXXXXXXXXXHDFNFFSVIYEWPKDLLTRLVFERGSTDAAEKVAEIMHADFVHEV 476
            HVAAI          HDFNFFSV+YEWPKDLLTRLVFERGSTDAA K+AEIM ADFVHEV
Sbjct: 1031 HVAAIGDIVDGTDTTHDFNFFSVVYEWPKDLLTRLVFERGSTDAAVKIAEIMCADFVHEV 1090

Query: 477  ITACVPPVYPPRSGHGWACIPVVPTFPKSSSENKVLSPSSKDAKPNCYCRSSATPGVTLY 536
            I+ACVPPVY PRSGHGWACIPVVP+FPKSSSENKVLSPSSKDAKPNCYCRSSATPGV+LY
Sbjct: 1091 ISACVPPVYTPRSGHGWACIPVVPSFPKSSSENKVLSPSSKDAKPNCYCRSSATPGVSLY 1150

Query: 537  PLQLDVVKHLAKISPVRSVLACVFGXXXXXXXXXXXXXXXXXDGFQQAPDADRLFYEFAL 596
            PL+LDVVKHLAKISP R+VLACVFG                 DG  Q PDADRLFYEFAL
Sbjct: 1151 PLELDVVKHLAKISPARAVLACVFGSCILYDSSSSSISSSLSDGLLQTPDADRLFYEFAL 1210

Query: 597  DQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNLEARTSVKRVREHDSETELDADD 656
            DQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNLEAR+SVKRVREHD+ETE DADD
Sbjct: 1211 DQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNLEARSSVKRVREHDTETESDADD 1270

Query: 657  IVNSSTIPVALSDLNTQEVEVTDFWHDSSKSEAAQLDTTVFLSFDWDNEEPYQKAVDRLI 716
            I NSSTIP AL+DLN+Q VE  DFWH+SSKSEA+QLDTT+FLSFDWDNEEPYQKAV+RLI
Sbjct: 1271 I-NSSTIPGALTDLNSQGVEAADFWHNSSKSEASQLDTTIFLSFDWDNEEPYQKAVERLI 1329

Query: 717  DEGKLMDALALSDRFLRDGASDKLLQLVIERAEEIHSNSAQRQGFGGRYIWSNSWQYCLR 776
             EGKLMDALALSDRFLR+GASD+LLQLVIERAEEIHSNSAQRQG GG  IWSNSWQYCLR
Sbjct: 1330 GEGKLMDALALSDRFLRNGASDQLLQLVIERAEEIHSNSAQRQGHGGHNIWSNSWQYCLR 1389

Query: 777  LKDKQLAARLALRYVHSWELDAALDVLTMCSCHLPQ 812
            LKDKQLAARLALRYVH+WELDAALDVLTMCSCHLPQ
Sbjct: 1390 LKDKQLAARLALRYVHTWELDAALDVLTMCSCHLPQ 1425