Miyakogusa Predicted Gene

Lj0g3v0354579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354579.1 tr|G7JCA1|G7JCA1_MEDTR Leucine-rich
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g108360,82.79,0,seg,NULL,CUFF.24413.1
         (812 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25730.2 | Symbols:  | unknown protein; LOCATED IN: cellular_...  1011   0.0  
AT2G25730.1 | Symbols:  | unknown protein; Has 157 Blast hits to...   934   0.0  

>AT2G25730.2 | Symbols:  | unknown protein; LOCATED IN:
            cellular_component unknown; EXPRESSED IN: 23 plant
            structures; EXPRESSED DURING: 14 growth stages. |
            chr2:10956751-10972729 REVERSE LENGTH=2487
          Length = 2487

 Score = 1011 bits (2614), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/822 (62%), Positives = 617/822 (75%), Gaps = 30/822 (3%)

Query: 1    MVNVIISLLHMDNTSVNLMHCGSPGSDSKLINACXXXXXXXXXXEGGNKMVISFTGLLLD 60
            MVN++ISLLH+D+  ++     S    S+  N            EG  ++VISFT  LLD
Sbjct: 636  MVNIVISLLHIDDIRLSSTQSASSACFSEKSNT-PGLDPGDLGTEGEKEIVISFTKQLLD 694

Query: 61   ILRRNIPSSMVELENTLDGGENTTSSQVLEWRMSISKRFIEEFEWRLSILQHLLPLSERQ 120
            +LRRN+PS  +E E  LDG  +T   Q LEWR+S++KRFIE+ EWRLS++QHLLPLSERQ
Sbjct: 695  VLRRNLPSHPIEQECQLDGNYSTDGRQALEWRVSMAKRFIEDCEWRLSVMQHLLPLSERQ 754

Query: 121  WRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVDGACKKA 180
            W  KE L++LRAAP KLLNLCMQ+AK+DIGEEAV+RF+LSAEDKATLELAEWVD A K  
Sbjct: 755  WGLKEVLSILRAAPEKLLNLCMQRAKYDIGEEAVNRFALSAEDKATLELAEWVDNAFKGT 814

Query: 181  SVDDVVSR-------VQDLDFSSLRSQLGPLATILLCIDVAATSAKSAGMSQELLDQAQT 233
             V+DV+SR       VQDLDF SL SQL PLA ILLCID AA+SAKS  +S++LLD++Q 
Sbjct: 815  LVEDVMSRTAEGAAAVQDLDFHSLGSQLSPLAMILLCIDAAASSAKSPTISKQLLDKSQV 874

Query: 234  MLSEIYPGGSPKVGSTYWDQILEVGVISVSRRLLKRLHEFLEQDNPPALQAILSGDIVIT 293
            MLSEIYPGG+PKVG TYWDQ+ EV +ISV RR+LKRL EFLEQD+P  LQA  SGD +I+
Sbjct: 875  MLSEIYPGGAPKVGFTYWDQVHEVAIISVLRRILKRLQEFLEQDDPQILQASFSGDTIIS 934

Query: 294  SVKESHRQEQRERALALLHQMIEDAHTGKRQFLSGKLHNLARAVADEETEPSTARGEGLY 353
            S  ESHRQ Q++RALA+LHQMIEDAH GKRQFLSGKLHNLARA+ADE+ E    +G+G  
Sbjct: 935  SCTESHRQGQKDRALAMLHQMIEDAHRGKRQFLSGKLHNLARALADEKPEVDVLKGDG-- 992

Query: 354  ADRGVISNSDKDIVLGLGLRVDKQTPLSSTGP---QSAGYDIKDSGKRIFAPLSAKSVTY 410
            +D  V    +KD VLGLGL+  KQ+P S+          ++ +D GK+ F PLS K+ TY
Sbjct: 993  SDMAV----EKDGVLGLGLKYTKQSPGSANRAVDGNPVSHETEDKGKKSFGPLSNKTSTY 1048

Query: 411  LSQFVLHVAAIXXXXXXXXXXHDFNFFSVIYEWPKDLLTRLVFERGSTDAAEKVAEIMHA 470
            LSQF+L+ AAI          HDFNFFS++YEWPKDLLTRLVF+R STDAA KVAE+M A
Sbjct: 1049 LSQFILYTAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRSSTDAAAKVAEVMSA 1108

Query: 471  DFVHEVITACVPPVYPPRSGHGWACIPVVPTFPKSSSENKVLSPSSKDAKPNCYCRSSAT 530
            DFVHEVI+ACVPPVYPPRSGHGWACIPV+PT P S SE KVLSPS  +AKPNCY RSSAT
Sbjct: 1109 DFVHEVISACVPPVYPPRSGHGWACIPVIPTTPCSHSEGKVLSPSI-EAKPNCYVRSSAT 1167

Query: 531  PGVTLYPLQLDVVKHLAKISPVRSVLACVFGXXXXXXXXXXXXXXXXXDGFQQAPDADRL 590
            PGV LYPLQLDV++HL KISPVR+VLACVFG                 D F  +PDADRL
Sbjct: 1168 PGVPLYPLQLDVIRHLVKISPVRAVLACVFGGSILYNGSDSIISSSLNDEFPSSPDADRL 1227

Query: 591  FYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNL--EARTSVKRVREHDS 648
            FYEF+LDQSER+PTLNRWIQMQTNLHRVSEF VT  Q  DD  +  + RT +KR+ EHDS
Sbjct: 1228 FYEFSLDQSERYPTLNRWIQMQTNLHRVSEFVVTPKQKPDDTRIKPDERTGIKRLLEHDS 1287

Query: 649  ETELDADDIVNSSTIPVALSDLNTQEVEVTDFWHDSSKSEAAQLDTTVFLSFDWDNEEPY 708
            ++E D ++  + + I  AL+D + ++         S ++   + D TVFLSFDW+NE PY
Sbjct: 1288 DSESDTEETFSKNNIQPALTDGSARD-------GGSFENGVCRTDPTVFLSFDWENEVPY 1340

Query: 709  QKAVDRLIDEGKLMDALALSDRFLRDGASDKLLQLVIERAEEIHSNSAQRQGFGGRYIWS 768
            +KAV+RLIDEGKLMDALALSDRFLR+GASD LLQL+I+  EE  S S + QG+GG+   S
Sbjct: 1341 EKAVNRLIDEGKLMDALALSDRFLRNGASDWLLQLLIKSREENPSTSGRSQGYGGQ---S 1397

Query: 769  NSWQYCLRLKDKQLAARLALRYVHSWELDAALDVLTMCSCHL 810
            NSWQYCLRLKDKQLAA LAL+Y+H+WEL+AAL+VLTMCSCHL
Sbjct: 1398 NSWQYCLRLKDKQLAATLALKYMHTWELEAALNVLTMCSCHL 1439


>AT2G25730.1 | Symbols:  | unknown protein; Has 157 Blast hits to 144
            proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa
            - 101; Fungi - 0; Plants - 35; Viruses - 0; Other
            Eukaryotes - 21 (source: NCBI BLink). |
            chr2:10956751-10972729 REVERSE LENGTH=2464
          Length = 2464

 Score =  934 bits (2413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/801 (60%), Positives = 579/801 (72%), Gaps = 48/801 (5%)

Query: 1    MVNVIISLLHMDNTSVNLMHCGSPGSDSKLINACXXXXXXXXXXEGGNKMVISFTGLLLD 60
            MVN++ISLLH+D+  ++     S    S+  N            EG  ++VISFT  LLD
Sbjct: 622  MVNIVISLLHIDDIRLSSTQSASSACFSEKSNT-PGLDPGDLGTEGEKEIVISFTKQLLD 680

Query: 61   ILRRNIPSSMVELENTLDGGENTTSSQVLEWRMSISKRFIEEFEWRLSILQHLLPLSERQ 120
            +LRRN+PS  +E E  LDG  +T   Q LEWR+S++KRFIE+ EWRLS++QHLLPLSERQ
Sbjct: 681  VLRRNLPSHPIEQECQLDGNYSTDGRQALEWRVSMAKRFIEDCEWRLSVMQHLLPLSERQ 740

Query: 121  WRWKEALTVLRAAPSKLLNLCMQKAKFDIGEEAVHRFSLSAEDKATLELAEWVDGACKKA 180
            W  KE L++LRAAP KLLNLCMQ+AK+DIGEEAV+RF+LSAEDKATLELAEWVD A K  
Sbjct: 741  WGLKEVLSILRAAPEKLLNLCMQRAKYDIGEEAVNRFALSAEDKATLELAEWVDNAFKGT 800

Query: 181  SVDDVVSR-------VQDLDFSSLRSQLGPLATILLCIDVAATSAKSAGMSQELLDQAQT 233
             V+DV+SR       VQDLDF SL SQL PLA +L                  L  Q+Q 
Sbjct: 801  LVEDVMSRTAEGAAAVQDLDFHSLGSQLSPLAMVL------------------LFAQSQV 842

Query: 234  MLSEIYPGGSPKVGSTYWDQILEVGVISVSRRLLKRLHEFLEQDNPPALQAILSGDIVIT 293
            MLSEIYPGG+PKVG TYWDQ+ EV +ISV RR+LKRL EFLEQD+P  LQA  SGD +I+
Sbjct: 843  MLSEIYPGGAPKVGFTYWDQVHEVAIISVLRRILKRLQEFLEQDDPQILQASFSGDTIIS 902

Query: 294  SVKESHRQEQRERALALLHQMIEDAHTGKRQFLSGKLHNLARAVADEETEPSTARGEGLY 353
            S  ESHRQ Q++RALA+LHQMIEDAH GKRQFLSGKLHNLARA+ADE+ E    +G+G  
Sbjct: 903  SCTESHRQGQKDRALAMLHQMIEDAHRGKRQFLSGKLHNLARALADEKPEVDVLKGDG-- 960

Query: 354  ADRGVISNSDKDIVLGLGLRVDKQTPLSSTGP---QSAGYDIKDSGKRIFAPLSAKSVTY 410
            +D  V    +KD VLGLGL+  KQ+P S+          ++ +D GK+ F PLS K+ TY
Sbjct: 961  SDMAV----EKDGVLGLGLKYTKQSPGSANRAVDGNPVSHETEDKGKKSFGPLSNKTSTY 1016

Query: 411  LSQFVLHVAAIXXXXXXXXXXHDFNFFSVIYEWPKDLLTRLVFERGSTDAAEKVAEIMHA 470
            LSQF+L+ AAI          HDFNFFS++YEWPKDLLTRLVF+R STDAA KVAE+M A
Sbjct: 1017 LSQFILYTAAIGDIVDGTDTTHDFNFFSLVYEWPKDLLTRLVFDRSSTDAAAKVAEVMSA 1076

Query: 471  DFVHEVITACVPPVYPPRSGHGWACIPVVPTFPKSSSENKVLSPSSKDAKPNCYCRSSAT 530
            DFVHEVI+ACVPPVYPPRSGHGWACIPV+PT P S SE KVLSPS  +AKPNCY RSSAT
Sbjct: 1077 DFVHEVISACVPPVYPPRSGHGWACIPVIPTTPCSHSEGKVLSPSI-EAKPNCYVRSSAT 1135

Query: 531  PGVTLYPLQLDVVKHLAKISPVRSVLACVFGXXXXXXXXXXXXXXXXXDGFQQAPDADRL 590
            PGV LYPLQLDV++HL KISPVR+VLACVFG                 D F  +PDADRL
Sbjct: 1136 PGVPLYPLQLDVIRHLVKISPVRAVLACVFGGSILYNGSDSIISSSLNDEFPSSPDADRL 1195

Query: 591  FYEFALDQSERFPTLNRWIQMQTNLHRVSEFAVTANQTADDGNL--EARTSVKRVREHDS 648
            FYEF+LDQSER+PTLNRWIQMQTNLHRVSEF VT  Q  DD  +  + RT +KR+ EHDS
Sbjct: 1196 FYEFSLDQSERYPTLNRWIQMQTNLHRVSEFVVTPKQKPDDTRIKPDERTGIKRLLEHDS 1255

Query: 649  ETELDADDIVNSSTIPVALSDLNTQEVEVTDFWHDSSKSEAAQLDTTVFLSFDWDNEEPY 708
            ++E D ++  + + I  AL+D + ++         S ++   + D TVFLSFDW+NE PY
Sbjct: 1256 DSESDTEETFSKNNIQPALTDGSARD-------GGSFENGVCRTDPTVFLSFDWENEVPY 1308

Query: 709  QKAVDRLIDEGKLMDALALSDRFLRDGASDKLLQLVIERAEEIHSNSAQRQGFGGRYIWS 768
            +KAV+RLIDEGKLMDALALSDRFLR+GASD LLQL+I+  EE  S S + QG+GG+   S
Sbjct: 1309 EKAVNRLIDEGKLMDALALSDRFLRNGASDWLLQLLIKSREENPSTSGRSQGYGGQ---S 1365

Query: 769  NSWQYCLRLKDKQLAARLALR 789
            NSWQYCLRLKDKQLAA LAL+
Sbjct: 1366 NSWQYCLRLKDKQLAATLALK 1386