Miyakogusa Predicted Gene
- Lj0g3v0348139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0348139.1 Non Chatacterized Hit- tr|A3ABP1|A3ABP1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,54.32,4e-19,DUF3223,Protein of unknown function DUF3223;
seg,NULL; no description,Copper amine oxidase,
N2/N3-te,NODE_20929_length_1204_cov_21.093023.path1.1
(197 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g04450.1 281 3e-76
Glyma14g09470.1 166 1e-41
Glyma17g35680.2 133 1e-31
Glyma17g35680.1 133 1e-31
Glyma06g04340.1 127 7e-30
Glyma04g04160.1 125 2e-29
Glyma13g26690.1 114 9e-26
Glyma15g37710.1 113 1e-25
Glyma06g04570.1 100 8e-22
Glyma14g09470.2 96 4e-20
Glyma01g42480.1 66 2e-11
Glyma11g02920.1 64 1e-10
Glyma04g33570.1 50 2e-06
Glyma06g20870.1 50 2e-06
>Glyma04g04450.1
Length = 203
Score = 281 bits (719), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 135/181 (74%), Positives = 152/181 (83%), Gaps = 4/181 (2%)
Query: 21 TARAVVARHRLWCSAATNSPSNEAEEK----AIPSTTFNLRSDKYQANHPRWEDDPDYRK 76
TA V ARHRLWCSAA N PS+EAE+K I +++F ++ ++ RWEDDPDYRK
Sbjct: 23 TAGGVAARHRLWCSAAANLPSDEAEKKTNSGGISNSSFARKAQYPPSSEARWEDDPDYRK 82
Query: 77 WRVKEEEILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSG 136
W+ KE+EIL DIEPI++L KDILHSR+YMDG RL+ EDEK IVEKLLAYHPHSEDKIG G
Sbjct: 83 WKDKEKEILSDIEPIVVLAKDILHSRRYMDGARLNEEDEKAIVEKLLAYHPHSEDKIGCG 142
Query: 137 LESIMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKRGS 196
LESIMVDRHP +R SRCLFVVRTDGGWIDFSYQKCLR+YIRDKYP HAERFIREHFKRGS
Sbjct: 143 LESIMVDRHPQYRQSRCLFVVRTDGGWIDFSYQKCLREYIRDKYPTHAERFIREHFKRGS 202
Query: 197 G 197
G
Sbjct: 203 G 203
>Glyma14g09470.1
Length = 189
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 112/166 (67%), Gaps = 13/166 (7%)
Query: 29 HRLWCSAATNSPSNEAEEKAIPSTTFNLRSDKYQANHPRWEDDPDYRKWRVKEEEILKDI 88
HRLWCSA +PS E E + PS Q P E D +WR KEE+I +D+
Sbjct: 29 HRLWCSA---TPSPE-EATSNPSC-------GTQTGSPNSEVDD--LEWRKKEEKIARDV 75
Query: 89 EPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIMVDRHPHF 148
EPI+ L IL+S +YM+G+ L++EDE+ +VE +L YHP EDKIGSGL SIMVD+HP +
Sbjct: 76 EPIVSLTMQILYSSRYMNGEILTMEDERAVVENILIYHPDYEDKIGSGLNSIMVDQHPLY 135
Query: 149 RHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
RCLFVVRTDG WIDFSY+ C+ +YI++KY I AERF+ + F R
Sbjct: 136 LFPRCLFVVRTDGSWIDFSYRVCIEEYIKNKYQICAERFVNKRFLR 181
>Glyma17g35680.2
Length = 107
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 98 ILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIMVDRHPHFRHSRCLFVV 157
IL+S +YM+G+ L++EDE+ +VE +L YHP EDKIGSGL SIMVD+HP + RCLFVV
Sbjct: 3 ILYSSRYMNGEILTMEDERAVVENILIYHPDYEDKIGSGLNSIMVDQHPLYLFPRCLFVV 62
Query: 158 RTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
RTDG WIDFSY+ C+ +YI++KY + AERF++ F R
Sbjct: 63 RTDGSWIDFSYRVCIEEYIKNKYQVSAERFVKRRFLR 99
>Glyma17g35680.1
Length = 107
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 77/97 (79%)
Query: 98 ILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIMVDRHPHFRHSRCLFVV 157
IL+S +YM+G+ L++EDE+ +VE +L YHP EDKIGSGL SIMVD+HP + RCLFVV
Sbjct: 3 ILYSSRYMNGEILTMEDERAVVENILIYHPDYEDKIGSGLNSIMVDQHPLYLFPRCLFVV 62
Query: 158 RTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
RTDG WIDFSY+ C+ +YI++KY + AERF++ F R
Sbjct: 63 RTDGSWIDFSYRVCIEEYIKNKYQVSAERFVKRRFLR 99
>Glyma06g04340.1
Length = 206
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%)
Query: 75 RKWRVKEEEILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIG 134
KW E+ IL+D P++ ++ ILHS +Y +G +LS E EK I+EKLL +HP E KIG
Sbjct: 82 NKWVDWEDLILEDTVPLVGFVRMILHSGQYDNGDKLSPEHEKTIIEKLLPFHPEFEKKIG 141
Query: 135 SGLESIMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
SG++ I + HP F SRCLF+VR DG +DFSY KC++ IR YP++A+ FI HF++
Sbjct: 142 SGVDYITIGYHPDFERSRCLFIVRQDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRK 201
Query: 195 GS 196
S
Sbjct: 202 KS 203
>Glyma04g04160.1
Length = 212
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 80/114 (70%)
Query: 83 EILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIMV 142
+IL+D P++ ++ ILHS +Y +G RLS E EK I+EKLL +HP E KIGSG++ I +
Sbjct: 96 QILEDTVPLVGFVRMILHSGQYDNGDRLSAEHEKTIIEKLLPFHPEFEKKIGSGVDYITI 155
Query: 143 DRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKRGS 196
HP F SRCLF+VR DG +DFSY KC++ IR YP++A+ FI HF++ S
Sbjct: 156 GYHPDFERSRCLFIVREDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKKS 209
>Glyma13g26690.1
Length = 1820
Score = 114 bits (284), Expect = 9e-26, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 79/115 (68%)
Query: 80 KEEEILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLES 139
+E+++LKDIEPIM ++ I+ + Y DG L+ ED+ ++E + +HP E K+G+G++
Sbjct: 1672 EEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENVFEHHPDKETKMGAGIDY 1731
Query: 140 IMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
+MV++H F+ SRC +VV DG DFSY+KCL YI KYP AE F+ ++F++
Sbjct: 1732 VMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPDLAESFLGKYFRK 1786
>Glyma15g37710.1
Length = 2101
Score = 113 bits (283), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/114 (43%), Positives = 78/114 (68%)
Query: 81 EEEILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESI 140
E+++LKDIEPIM ++ I+ + Y DG L+ ED+ ++E + +HP E K+G+G++ +
Sbjct: 1940 EQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKMGTGIDYV 1999
Query: 141 MVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFKR 194
MV++H F+ SRC +VV DG DFSY+KCL YI KYP AE F+ ++F++
Sbjct: 2000 MVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPDLAESFLGKYFRK 2053
>Glyma06g04570.1
Length = 53
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 48/52 (92%)
Query: 142 VDRHPHFRHSRCLFVVRTDGGWIDFSYQKCLRKYIRDKYPIHAERFIREHFK 193
VDRHP +R SRCLFVVRTDGGWIDFSYQK LR+YIRDKYP HAERFIREHFK
Sbjct: 1 VDRHPQYRQSRCLFVVRTDGGWIDFSYQKWLREYIRDKYPTHAERFIREHFK 52
>Glyma14g09470.2
Length = 157
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 13/113 (11%)
Query: 29 HRLWCSAATNSPSNEAEEKAIPSTTFNLRSDKYQANHPRWEDDPDYRKWRVKEEEILKDI 88
HRLWCSA +PS E E + PS Q P E D +WR KEE+I +D+
Sbjct: 29 HRLWCSA---TPSPE-EATSNPSC-------GTQTGSPNSEVDD--LEWRKKEEKIARDV 75
Query: 89 EPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIM 141
EPI+ L IL+S +YM+G+ L++EDE+ +VE +L YHP EDKIGSGL SIM
Sbjct: 76 EPIVSLTMQILYSSRYMNGEILTMEDERAVVENILIYHPDYEDKIGSGLNSIM 128
>Glyma01g42480.1
Length = 1376
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 75 RKWRVKEEEILKDIEPIMLLMKDILHSRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIG 134
++W+ IL++ + + K SR +D L E ++ + ++L +HPH +K G
Sbjct: 1266 KQWKT----ILRNFVTVNDIQKLTFASRYSID--ELLSESDRSTMLRVLNFHPHKSEKFG 1319
Query: 135 SGLESIMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCL 172
G + I V HP ++ SRC ++RTDG DFSY+KC+
Sbjct: 1320 IGPQDIKVGWHPKYKDSRCFHIIRTDGTVEDFSYRKCI 1357
>Glyma11g02920.1
Length = 1385
Score = 63.5 bits (153), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 101 SRKYMDGQRLSVEDEKDIVEKLLAYHPHSEDKIGSGLESIMVDRHPHFRHSRCLFVVRTD 160
SRKY + LS E ++ + ++L +HP +K G G + I V HP ++ SRC +VR D
Sbjct: 1290 SRKYSIDELLS-ESDRSTMLRVLNFHPRKSEKFGIGPQDIKVGWHPKYKDSRCFHIVRID 1348
Query: 161 GGWIDFSYQKCL 172
G DFSY+KC+
Sbjct: 1349 GTVEDFSYRKCI 1360
>Glyma04g33570.1
Length = 252
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 118 IVEKLLAYHPHSEDKIGSGLESIMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCL 172
++E L H + KIG G+ + V +HP F+ SRC F++R D DFS++KC+
Sbjct: 142 LLELLKNGHAEPDKKIGGGVRAFQVRKHPTFK-SRCFFLIREDDSADDFSFRKCV 195
>Glyma06g20870.1
Length = 252
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 118 IVEKLLAYHPHSEDKIGSGLESIMVDRHPHFRHSRCLFVVRTDGGWIDFSYQKCL 172
++E L H + KIG G+ + V +HP F+ SRC F++R D DFS++KC+
Sbjct: 139 LLELLKNGHAEPDKKIGGGVRAFQVRKHPTFK-SRCFFLIREDDSADDFSFRKCV 192