Miyakogusa Predicted Gene
- Lj0g3v0348139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0348139.1 Non Chatacterized Hit- tr|A3ABP1|A3ABP1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,54.32,4e-19,DUF3223,Protein of unknown function DUF3223;
seg,NULL; no description,Copper amine oxidase,
N2/N3-te,NODE_20929_length_1204_cov_21.093023.path1.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW614571 similar to UniRef100_A7NU16 Cluster: Chromosom... 878 0.0
gnl|LJGI|TC61988 similar to UniRef100_A7NU16 Cluster: Chromosome... 313 7e-85
gnl|LJGI|TC65623 similar to UniRef100_A7NU16 Cluster: Chromosome... 295 2e-79
>gnl|LJGI|BW614571 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 457
Score = 878 bits (443), Expect = 0.0
Identities = 443/443 (100%)
Strand = Plus / Plus
Query: 1 atggccgctcctcttcttctcagacaggttctcctgcttcgcgcttgcctccatagccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 atggccgctcctcttcttctcagacaggttctcctgcttcgcgcttgcctccatagccac 74
Query: 61 accgccagagccgttgtcgcgcgccaccgtctgtggtgcagcgccgccacgaactcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 accgccagagccgttgtcgcgcgccaccgtctgtggtgcagcgccgccacgaactcaccg 134
Query: 121 tcgaatgaggcggaggagaaagcaatccccagcaccaccttcaacctgcggagcgataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tcgaatgaggcggaggagaaagcaatccccagcaccaccttcaacctgcggagcgataag 194
Query: 181 taccaggcaaatcacccgcgttgggaggatgatcctgactatcggaaatggagggttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 taccaggcaaatcacccgcgttgggaggatgatcctgactatcggaaatggagggttaaa 254
Query: 241 gaagaggagattctcaaggacattgaacctatcatgttgcttatgaaggatattctccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gaagaggagattctcaaggacattgaacctatcatgttgcttatgaaggatattctccat 314
Query: 301 tcgcgaaagtatatggatggacagagactgagtgtggaggatgagaaagatatagtggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcgcgaaagtatatggatggacagagactgagtgtggaggatgagaaagatatagtggag 374
Query: 361 aagctacttgcttatcatccacactctgaagataagattgggtctggtcttgaatccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagctacttgcttatcatccacactctgaagataagattgggtctggtcttgaatccatt 434
Query: 421 atggttgaccgtcacccccattt 443
|||||||||||||||||||||||
Sbjct: 435 atggttgaccgtcacccccattt 457
>gnl|LJGI|TC61988 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 975
Score = 313 bits (158), Expect = 7e-85
Identities = 305/354 (86%)
Strand = Plus / Plus
Query: 225 gaaatggagggttaaagaagaggagattctcaaggacattgaacctatcatgttgcttat 284
||||||||||| ||| |||||||||||||||| |||||||||||| ||| | ||||||
Sbjct: 158 gaaatggagggataatgaagaggagattctcagggacattgaacccatcgttttgcttgc 217
Query: 285 gaaggatattctccattcgcgaaagtatatggatggacagagactgagtgtggaggatga 344
||||| ||||| |||| || ||| |||||||||||| ||||| ||||| ||| ||
Sbjct: 218 caaggacattcttttctcgccaaggtacatggatggacaggtactgaatgtggcggagga 277
Query: 345 gaaagatatagtggagaagctacttgcttatcatccacactctgaagataagattgggtc 404
||||| |||||| || ||||| |||||||| |||||| | ||||||||||||||||| |
Sbjct: 278 gaaagctatagtagacaagctccttgcttaccatccagattctgaagataagattggatg 337
Query: 405 tggtcttgaatccattatggttgaccgtcacccccattttcggcattcaaggtgtctttt 464
|||||||||||||||||||||||||||||||||| | ||| || | ||||||||||||||
Sbjct: 338 tggtcttgaatccattatggttgaccgtcaccccgaatttgggtactcaaggtgtctttt 397
Query: 465 tgttgtaagaactgatggaggctggatcgatttctcctatcaaaagtgccttcggaaata 524
|||||||||||||||||| | |||||||| ||||||||| | |||||||| ||| ||
Sbjct: 398 tgttgtaagaactgatggtgtttggatcgacttctcctataagtggtgccttcagaatta 457
Query: 525 catcagagataagtaccctatccatgcagaaaggtttattcgagaacattttaa 578
|||||||||||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct: 458 catcagagataagtaccctatccacgcagaaaggtttattcaaaaacattttaa 511
Score = 125 bits (63), Expect = 3e-28
Identities = 96/107 (89%)
Strand = Plus / Plus
Query: 19 ctcagacaggttctcctgcttcgcgcttgcctccatagccacaccgccagagccgttgtc 78
||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 15 ctcagacagattcttctgcttcgcgctcgcctccatagccccaccgccagagccgttgtg 74
Query: 79 gcgcgccaccgtctgtggtgcagcgccgccacgaactcaccgtcgaa 125
||||| ||||| | ||||||||||||| ||||| |||| ||||||||
Sbjct: 75 gcgcgtcaccggccgtggtgcagcgccaccacggactcgccgtcgaa 121
>gnl|LJGI|TC65623 similar to UniRef100_A7NU16 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 622
Score = 295 bits (149), Expect = 2e-79
Identities = 302/353 (85%)
Strand = Plus / Plus
Query: 222 tcggaaatggagggttaaagaagaggagattctcaaggacattgaacctatcatgttgct 281
|||||||||||||| || |||||||||||||||| ||||||||||| ||| | |||||
Sbjct: 19 tcggaaatggagggatattgaagaggagattctcagagacattgaacccatcgttttgct 78
Query: 282 tatgaaggatattctccattcgcgaaagtatatggatggacagagactgagtgtggagga 341
| ||||| ||||| || || | || ||||||| ||||||||| |||| | |||||||
Sbjct: 79 tgccaaggacattcttcactcaccaaggtatatgaatggacagatactggatatggagga 138
Query: 342 tgagaaagatatagtggagaagctacttgcttatcatccacactctgaagataagattgg 401
||||||| |||||| |||||||| ||||||||||||||| | |||||||||||||||||
Sbjct: 139 ggagaaagctatagtagagaagcttcttgcttatcatccagaatctgaagataagattgg 198
Query: 402 gtctggtcttgaatccattatggttgaccgtcacccccattttcggcattcaaggtgtct 461
|| |||| |||||||||||||||||||||||||||| | |||||||| |||| | ||||
Sbjct: 199 gtgtggtattgaatccattatggttgaccgtcaccctgaatttcggcactcaaagcgtct 258
Query: 462 ttttgttgtaagaactgatggaggctggatcgatttctcctatcaaaagtgccttcggaa 521
||||||||| ||||||||||| | |||||||| ||||||||| | |||||||| ||
Sbjct: 259 ttttgttgtgagaactgatggtgtttggatcgacttctcctataattggtgccttcagag 318
Query: 522 atacatcagagataagtaccctatccatgcagaaaggtttattcgagaacatt 574
||||||||| |||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 319 ttacatcagatataagtaccctatccacgcagaaaggtttattcgaaaacatt 371