Miyakogusa Predicted Gene

Lj0g3v0344259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344259.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,95.5,0,seg,NULL;
no description,NULL; vWA-like,NULL; beta-sandwich domain of
Sec23/24,NULL; Sec23_trunk,Sec,CUFF.23615.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g011270.1 | protein transporter Sec23-like protein | HC | ...   421   e-118
Medtr3g084740.1 | protein transporter Sec23-like protein | HC | ...   289   1e-78
Medtr3g084740.2 | protein transporter Sec23-like protein | HC | ...   289   2e-78
Medtr1g105605.1 | protein transporter Sec23-like protein | HC | ...   160   1e-39
Medtr1g105605.2 | protein transporter Sec23-like protein | HC | ...   160   1e-39

>Medtr8g011270.1 | protein transporter Sec23-like protein | HC |
           chr8:2969140-2977863 | 20130731
          Length = 763

 Score =  421 bits (1081), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/208 (96%), Positives = 206/208 (99%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVP+YHKCVKFYDGLSKQ
Sbjct: 279 CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPHYHKCVKFYDGLSKQ 338

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVL ESFGHPVFK+SLKRVFQSGDYDL
Sbjct: 339 LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLTESFGHPVFKDSLKRVFQSGDYDL 398

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL+SNGIFEINCSKDIKVQGIIGPCASLEKK PLCSDVVIGQGGTSAWKMCGLDKSTSLC
Sbjct: 399 GLASNGIFEINCSKDIKVQGIIGPCASLEKKSPLCSDVVIGQGGTSAWKMCGLDKSTSLC 458

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           LFFDIVRKE+PDATMQSTSNQF+FQFLT
Sbjct: 459 LFFDIVRKETPDATMQSTSNQFYFQFLT 486


>Medtr3g084740.1 | protein transporter Sec23-like protein | HC |
           chr3:38270252-38263566 | 20130731
          Length = 771

 Score =  289 bits (740), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 165/208 (79%), Gaps = 1/208 (0%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C PG+ ARI+A +GGP TEGP  IVSK+LS+P+RSHKDLDKD+ PY+ K VKFY+GL+KQ
Sbjct: 286 CNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQ 345

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVERTGGLVVL+ESFGH VFK+S KRVF+ G+  L
Sbjct: 346 LVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSL 405

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EINCSK+IK+QGI+GPC S+EKKGP  +D VIG+G T+ WKMCGLDKST L 
Sbjct: 406 GLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLT 465

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           + FD+   +  + T    + Q + QFLT
Sbjct: 466 VMFDLSSSDRSN-TPGGVNPQLYLQFLT 492


>Medtr3g084740.2 | protein transporter Sec23-like protein | HC |
           chr3:38270164-38263958 | 20130731
          Length = 702

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 136/208 (65%), Positives = 165/208 (79%), Gaps = 1/208 (0%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C PG+ ARI+A +GGP TEGP  IVSK+LS+P+RSHKDLDKD+ PY+ K VKFY+GL+KQ
Sbjct: 286 CNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQ 345

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVERTGGLVVL+ESFGH VFK+S KRVF+ G+  L
Sbjct: 346 LVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSL 405

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EINCSK+IK+QGI+GPC S+EKKGP  +D VIG+G T+ WKMCGLDKST L 
Sbjct: 406 GLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTVIGEGNTTIWKMCGLDKSTCLT 465

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           + FD+   +  + T    + Q + QFLT
Sbjct: 466 VMFDLSSSDRSN-TPGGVNPQLYLQFLT 492


>Medtr1g105605.1 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 7/210 (3%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C   + +RIM F  GPAT GP  +V     + +R+H D+      ++ K   FY  ++K+
Sbjct: 267 CFVNTGSRIMVFTSGPATLGPGLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRQIAKR 326

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYD- 135
           L     VLDLFAC+LDQVG+AEL+  +ER+GG VVLAESF    F++ L+ +F+  D + 
Sbjct: 327 LFDASVVLDLFACSLDQVGVAELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEG 386

Query: 136 -LGLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTS 194
            L ++ +   EI  + D+K+ G +GPC SL KK    S+  +GQGGT  WK+  L   T 
Sbjct: 387 FLKMNFDATIEIVTTNDVKISGALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTC 446

Query: 195 LCLFFDIVRKESPDATMQSTSNQFFFQFLT 224
           +  FF +  K+    T+Q +S  F  QF+T
Sbjct: 447 IAFFFQVSDKQ----TIQPSS-AFMVQFIT 471


>Medtr1g105605.2 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  160 bits (404), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 7/210 (3%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C   + +RIM F  GPAT GP  +V     + +R+H D+      ++ K   FY  ++K+
Sbjct: 267 CFVNTGSRIMVFTSGPATLGPGLVVDSDFRQSMRTHNDIFNGQARHHSKSCSFYRQIAKR 326

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYD- 135
           L     VLDLFAC+LDQVG+AEL+  +ER+GG VVLAESF    F++ L+ +F+  D + 
Sbjct: 327 LFDASVVLDLFACSLDQVGVAELREPIERSGGFVVLAESFESDQFRKCLRHLFKHDDDEG 386

Query: 136 -LGLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTS 194
            L ++ +   EI  + D+K+ G +GPC SL KK    S+  +GQGGT  WK+  L   T 
Sbjct: 387 FLKMNFDATIEIVTTNDVKISGALGPCMSLRKKNASVSETEVGQGGTCVWKLNTLTDRTC 446

Query: 195 LCLFFDIVRKESPDATMQSTSNQFFFQFLT 224
           +  FF +  K+    T+Q +S  F  QF+T
Sbjct: 447 IAFFFQVSDKQ----TIQPSS-AFMVQFIT 471