Miyakogusa Predicted Gene

Lj0g3v0344259.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0344259.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,95.5,0,seg,NULL;
no description,NULL; vWA-like,NULL; beta-sandwich domain of
Sec23/24,NULL; Sec23_trunk,Sec,CUFF.23615.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family p...   335   1e-92
AT4G14160.2 | Symbols:  | Sec23/Sec24 protein transport family p...   292   1e-79
AT4G14160.1 | Symbols:  | Sec23/Sec24 protein transport family p...   292   1e-79
AT4G14160.3 | Symbols:  | Sec23/Sec24 protein transport family p...   290   4e-79
AT3G23660.2 | Symbols:  | Sec23/Sec24 protein transport family p...   289   1e-78
AT3G23660.1 | Symbols:  | Sec23/Sec24 protein transport family p...   289   1e-78
AT1G05520.1 | Symbols:  | Sec23/Sec24 protein transport family p...   287   3e-78
AT5G43670.1 | Symbols:  | Sec23/Sec24 protein transport family p...   154   3e-38
AT4G01810.1 | Symbols:  | Sec23/Sec24 protein transport family p...    54   1e-07

>AT2G21630.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr2:9250346-9253829 FORWARD LENGTH=761
          Length = 761

 Score =  335 bits (860), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 159/208 (76%), Positives = 183/208 (87%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C PGSAARIMAFIGGP+T+GP  IVS++LS+PIRSHKD+DKDS  YYHK V+FY+ L+KQ
Sbjct: 280 CFPGSAARIMAFIGGPSTQGPGAIVSRELSDPIRSHKDIDKDSAMYYHKAVEFYEMLAKQ 339

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LVHQGHVLD+FA ++DQVGIAELK AVE+TGG VVLAESFGH VF++SLKRV QSG+ DL
Sbjct: 340 LVHQGHVLDVFASSVDQVGIAELKVAVEQTGGFVVLAESFGHSVFRDSLKRVCQSGENDL 399

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GLSS GIFEINCSKDIKVQGIIGPCASLEKKGPLCSD  IGQG TSAWKMCGLD +TS+C
Sbjct: 400 GLSSCGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDTAIGQGHTSAWKMCGLDNNTSIC 459

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           L F+I + ++ D  +QS SNQF+FQFLT
Sbjct: 460 LVFEIAKIDTADVVLQSQSNQFYFQFLT 487


>AT4G14160.2 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8173026 FORWARD LENGTH=772
          Length = 772

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/210 (66%), Positives = 167/210 (79%), Gaps = 6/210 (2%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C+PG+ ARI+A +GGP TEGP  I+SK LS+P+RSHKDLDKD+ PYY K VKFYD ++KQ
Sbjct: 288 CLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQ 347

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVE TGGLVVL+ESFGH VFK+S KR+F+ G++ L
Sbjct: 348 LVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSL 407

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EINCSKDIK+QG+IGPC+SLEKKGP  +D VIG+G TSAWK+CGLDKST L 
Sbjct: 408 GLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLT 467

Query: 197 LFFDIVRKES--PDATMQSTSNQFFFQFLT 224
           +FFD+    S  P A  Q    Q + QF+T
Sbjct: 468 VFFDLSSTGSTAPGALNQ----QLYLQFIT 493


>AT4G14160.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8173026 FORWARD LENGTH=773
          Length = 773

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 139/210 (66%), Positives = 167/210 (79%), Gaps = 6/210 (2%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C+PG+ ARI+A +GGP TEGP  I+SK LS+P+RSHKDLDKD+ PYY K VKFYD ++KQ
Sbjct: 288 CLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQ 347

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVE TGGLVVL+ESFGH VFK+S KR+F+ G++ L
Sbjct: 348 LVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSL 407

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EINCSKDIK+QG+IGPC+SLEKKGP  +D VIG+G TSAWK+CGLDKST L 
Sbjct: 408 GLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLT 467

Query: 197 LFFDIVRKES--PDATMQSTSNQFFFQFLT 224
           +FFD+    S  P A  Q    Q + QF+T
Sbjct: 468 VFFDLSSTGSTAPGALNQ----QLYLQFIT 493


>AT4G14160.3 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:8167574-8172266 FORWARD LENGTH=620
          Length = 620

 Score =  290 bits (743), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 139/210 (66%), Positives = 167/210 (79%), Gaps = 6/210 (2%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C+PG+ ARI+A +GGP TEGP  I+SK LS+P+RSHKDLDKD+ PYY K VKFYD ++KQ
Sbjct: 288 CLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQ 347

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVE TGGLVVL+ESFGH VFK+S KR+F+ G++ L
Sbjct: 348 LVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFGHSVFKDSFKRMFEDGEHSL 407

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EINCSKDIK+QG+IGPC+SLEKKGP  +D VIG+G TSAWK+CGLDKST L 
Sbjct: 408 GLCFNGTLEINCSKDIKIQGVIGPCSSLEKKGPNVADTVIGEGNTSAWKLCGLDKSTCLT 467

Query: 197 LFFDIVRKES--PDATMQSTSNQFFFQFLT 224
           +FFD+    S  P A  Q    Q + QF+T
Sbjct: 468 VFFDLSSTGSTAPGALNQ----QLYLQFIT 493


>AT3G23660.2 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr3:8513666-8517729 REVERSE LENGTH=791
          Length = 791

 Score =  289 bits (740), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 2/208 (0%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C+PG+ ARI+A IGGP TEGP  IVSK LS+P+RSHKDLDKD+ PYY K VKFYD ++KQ
Sbjct: 281 CLPGTGARIVALIGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQ 340

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVERTGGLVVL+ESFGH VFK+S KRVF+ GD  L
Sbjct: 341 LVTQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGDQAL 400

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EI CS+DIK+QG IGPC+SLEKKG   +D VIG+G TSAW++CGLDK+T L 
Sbjct: 401 GLCFNGTLEICCSQDIKIQGAIGPCSSLEKKGASVADTVIGEGNTSAWRLCGLDKTTCLT 460

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           +FFDI    S   T  + + QF+ QFLT
Sbjct: 461 IFFDI--SSSGSNTPGAANPQFYLQFLT 486


>AT3G23660.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr3:8513666-8517729 REVERSE LENGTH=765
          Length = 765

 Score =  289 bits (739), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 140/208 (67%), Positives = 165/208 (79%), Gaps = 2/208 (0%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C+PG+ ARI+A IGGP TEGP  IVSK LS+P+RSHKDLDKD+ PYY K VKFYD ++KQ
Sbjct: 281 CLPGTGARIVALIGGPCTEGPGTIVSKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQ 340

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV QGHVLDLFA ALDQVG+AE+K AVERTGGLVVL+ESFGH VFK+S KRVF+ GD  L
Sbjct: 341 LVTQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGDQAL 400

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EI CS+DIK+QG IGPC+SLEKKG   +D VIG+G TSAW++CGLDK+T L 
Sbjct: 401 GLCFNGTLEICCSQDIKIQGAIGPCSSLEKKGASVADTVIGEGNTSAWRLCGLDKTTCLT 460

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           +FFDI    S   T  + + QF+ QFLT
Sbjct: 461 IFFDI--SSSGSNTPGAANPQFYLQFLT 486


>AT1G05520.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr1:1631126-1635703 REVERSE LENGTH=783
          Length = 783

 Score =  287 bits (735), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 137/208 (65%), Positives = 162/208 (77%), Gaps = 1/208 (0%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C PG+ ARI+A IGGP +EGP  IVSK LSEP+RSHKDLDKD+ P+Y K  KFYD L+ Q
Sbjct: 298 CFPGTGARIVALIGGPCSEGPGTIVSKDLSEPLRSHKDLDKDAAPFYKKAEKFYDALANQ 357

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDL 136
           LV+QGHVLDLFA ALDQVG+AE+K AVERTGGLVVL+ESFGH VFK+S KRVF+ G+  L
Sbjct: 358 LVNQGHVLDLFASALDQVGVAEMKAAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEESL 417

Query: 137 GLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
           GL  NG  EI CSKDIK+QGIIGPCASL+KKGP  +D VIG+G T+ WKMCGLDK T L 
Sbjct: 418 GLCFNGTLEICCSKDIKIQGIIGPCASLQKKGPSVADTVIGEGNTTQWKMCGLDKRTCLT 477

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQFLT 224
           +FFD+   +   A     +NQ + QF+T
Sbjct: 478 VFFDLSSSDQSSAP-GGVNNQLYLQFMT 504


>AT5G43670.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr5:17539025-17541733 REVERSE LENGTH=794
          Length = 794

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 4/209 (1%)

Query: 17  CVPGSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHKCVKFYDGLSKQ 76
           C   + +RIM F  GPAT GP  IV   LS  IR+H+D+    V YY K   FY  L+K+
Sbjct: 314 CSVTTGSRIMVFTSGPATRGPGIIVDSDLSNSIRTHRDIITGHVSYYDKSCGFYKKLAKR 373

Query: 77  LVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVF-QSGDYD 135
           L     VLD+FAC+LDQVG AEL+ AVE +GG ++L E+F    FK+ L+ +F +  D +
Sbjct: 374 LCDSSVVLDVFACSLDQVGAAELRYAVEMSGGFLLLGETFESEQFKKCLRHIFIRDADGN 433

Query: 136 LGLSSNGIFEINCSKDIKVQGIIGPCASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSL 195
           L +  +   E+  +KD+++ G +GP  SL +K  + S+  IG+GGT  WK   +   T +
Sbjct: 434 LSMYFDVSLEVVTTKDMRICGALGPVVSLRQKNDIVSETEIGEGGTYMWKTSTVTNKTCV 493

Query: 196 CLFFDIVRKESPDATMQSTSNQFFFQFLT 224
             FF +  +++      S    FF QF+T
Sbjct: 494 SFFFHVSNEQNRKPQPGSA---FFIQFIT 519


>AT4G01810.1 | Symbols:  | Sec23/Sec24 protein transport family
           protein | chr4:776734-779802 REVERSE LENGTH=880
          Length = 880

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 34/206 (16%)

Query: 20  GSAARIMAFIGGPATEGPAPIVSKQLSEPIRSHKDLDKDSVPYYHK-CVKFYDGLSKQLV 78
           G  +RI+   GGP T GP   V   +S P          + PY  K  +K+ + L ++  
Sbjct: 422 GGNSRIIVCAGGPITYGPG-SVPHSMSHP----------NYPYMEKTAIKWMENLGREAH 470

Query: 79  HQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHPVFKESLKRVFQSGDYDLGL 138
               V+D+       + +  L+   + +GG++VL + FG   F   L+R           
Sbjct: 471 RHNTVVDILCAGTCPLRVPILQPLAKASGGVLVLHDDFGE-AFGVDLQRAATRA-----A 524

Query: 139 SSNGIFEINCSKDIKVQGIIGPC--ASLEKKGPLCSDVVIGQGGTSAWKMCGLDKSTSLC 196
            S+G+ E+ CS DI +  +IGP   A  E      SD  +      + +M  ++++ S  
Sbjct: 525 GSHGLLEVRCSDDILITQVIGPGEEAHSETHETFKSDAAL------SIQMLSVEETQSFS 578

Query: 197 LFFDIVRKESPDATMQSTSNQFFFQF 222
           L  +  R           S+  FFQF
Sbjct: 579 LSMENKR--------DIKSDHVFFQF 596