Miyakogusa Predicted Gene

Lj0g3v0344259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344259.1 tr|G7LEA6|G7LEA6_MEDTR Protein transport protein
SEC23 OS=Medicago truncatula GN=MTR_8g011270 PE=4 S,95.5,0,seg,NULL;
no description,NULL; vWA-like,NULL; beta-sandwich domain of
Sec23/24,NULL; Sec23_trunk,Sec,CUFF.23615.1
         (674 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77368 similar to UniRef100_A7QQS7 Cluster: Chromosome...    54   1e-06

>gnl|LJGI|TC77368 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
           scaffold_144, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_144,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (55%)
          Length = 1808

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 105/131 (80%)
 Strand = Plus / Plus

                                                                       
Query: 238 cagggtcatgtactagatctctttgcttgtgctcttgatcaggttggcattgctgaactt 297
           |||||||| ||  ||||||| ||||| |  |||||||||||||||||  |||| ||| | 
Sbjct: 2   cagggtcacgttttagatctttttgcatcagctcttgatcaggttggggttgcagaaatg 61

                                                                       
Query: 298 aaaactgctgttgaaaggactgggggccttgttgtactcgcggagagttttggccatcca 357
           |||  ||| |||||||  ||||| ||||||||||| ||  | || |||||||||||| ||
Sbjct: 62  aaagttgcagttgaaaaaactggtggccttgttgtcctgtctgaaagttttggccattca 121

                      
Query: 358 gtatttaagga 368
           || || |||||
Sbjct: 122 gtcttcaagga 132