Miyakogusa Predicted Gene
- Lj0g3v0343449.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0343449.1 Non Chatacterized Hit- tr|I1J6C6|I1J6C6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51302 PE,68.13,0,no
description,Helix-loop-helix domain; seg,NULL; coiled-coil,NULL; HLH,
helix-loop-helix DNA-bindin,CUFF.23560.1
(640 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 273 2e-73
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 260 2e-69
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 238 1e-62
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 179 6e-45
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 138 1e-32
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 138 1e-32
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 138 1e-32
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 138 1e-32
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 122 8e-28
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 117 3e-26
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 94 2e-19
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 90 6e-18
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 89 8e-18
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 88 2e-17
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 88 2e-17
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 87 3e-17
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 79 8e-15
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 79 8e-15
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 79 8e-15
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 79 1e-14
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 78 2e-14
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 3e-14
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 3e-14
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 76 6e-14
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 1e-13
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 75 1e-13
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 75 1e-13
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 74 3e-13
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 74 3e-13
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 74 3e-13
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 73 5e-13
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 1e-12
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 70 7e-12
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 67 5e-11
AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 66 8e-11
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 9e-11
AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 66 1e-10
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 62 2e-09
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 9e-09
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 1e-08
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 59 1e-08
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 59 1e-08
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 4e-08
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 56 9e-08
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 1e-07
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 2e-07
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 7e-07
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 7e-07
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 8e-07
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 8e-07
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 8e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 1e-06
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 52 1e-06
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 52 1e-06
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 51 2e-06
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 5e-06
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 222/353 (62%), Gaps = 59/353 (16%)
Query: 306 LQFQN-SSSALTE------TPSSVHVHTPN----GFLPRELNFSSS----MKPESGEILS 350
+QF+N SSS +TE TPS VH T N RELNFS+S +KP SGEIL+
Sbjct: 309 IQFENGSSSTITENPNLDPTPSPVHSQTQNPKFNNTFSRELNFSTSSSTLVKPRSGEILN 368
Query: 351 FG-ESKKNSCTGNGNFFSGQSQSGAVAGAENKRRSPGARSSV--DNGMLSF---TSGAIL 404
FG E K++S + + +SGQ+Q ENKR+ RS V ++ +LSF T+G
Sbjct: 369 FGDEGKRSSGNPDPSSYSGQTQ------FENKRK----RSMVLNEDKVLSFGDKTAGE-- 416
Query: 405 SDSNVKXXXXXXXXXXXXXXXXXIEASVVKEADSSRLVXXXXXXXXXXXXXANGREEPLN 464
SD + +EASVVKE V ANGREEPLN
Sbjct: 417 SDHS------------------DLEASVVKE------VAVEKRPKKRGRKPANGREEPLN 452
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIA+I EL +KV ESEK +++
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIK 512
Query: 525 KQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIECKKKNHPA 584
QLE K LE + + S+ +S K + + I+VKI+GWDAMIR+E K+NHPA
Sbjct: 513 NQLEEVK--LELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPA 570
Query: 585 VRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALSSKVG 637
RLM+AL +L+L++ HAS++VVNDLMIQQATV MG R YTQE+L +L SK+G
Sbjct: 571 ARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLISKIG 623
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
Query: 42 AQPMLNPETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXX 101
AQ N ETLQQRL ALIEG E WTYAIFWQPSYD+S GA +LGWGDGYYKG
Sbjct: 59 AQAGFNQETLQQRLQALIEGTHEGWTYAIFWQPSYDFS-GASVLGWGDGYYKGEEDKANP 117
Query: 102 XXXXXX--XXXXXXQDHRKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFV 159
Q++RKKVLRELNSLISG A D AVDEEVTDTEWFFLVSMTQSF
Sbjct: 118 RRRSSSPPFSTPADQEYRKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFA 177
Query: 160 NGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELAST 219
G+GL G+A+ NAVWVSGSD+LSGS CERA+QG +FG+ T+ CIP+ ANGVVE+ ST
Sbjct: 178 CGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPS--ANGVVEVGST 235
Query: 220 EVIPHSPDLMNKVRI 234
E I S DL+NKVRI
Sbjct: 236 EPIRQSSDLINKVRI 250
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 192/276 (69%), Gaps = 24/276 (8%)
Query: 364 NFFSGQSQSGAVAGAENKRRSPGARSSVDNGMLSFTSGAILSDSNVKXXXXXXXXXXXXX 423
NF +G ++G + NK+RSP S+ + GMLSFTS + DSN
Sbjct: 335 NFKNG-IENGQEEDSSNKKRSP--VSNNEEGMLSFTS-VLPCDSN--------------- 375
Query: 424 XXXXIEASVVKEADSSRLVXXXXXXXXXXXXX-ANGREEPLNHVEAERQRREKLNQRFYA 482
+EASV KEA+S+R+V ANGREEPLNHVEAERQRREKLNQRFY+
Sbjct: 376 -HSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYS 434
Query: 483 LRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQLESAKKELEAVSKNPP 542
LRAVVPNVSKMDKASLLGDAI++I EL +K++ AES+K EL+KQ++ K EA +
Sbjct: 435 LRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNK--EAGNAKSS 492
Query: 543 PPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHAS 602
D++ N S LI++ +DVKI+GWDAMIRI+C K+NHP + M ALKELDL++ HAS
Sbjct: 493 VKDRKC-LNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHAS 551
Query: 603 VTVVNDLMIQQATVNMGSRFYTQEELLLALSSKVGD 638
++VVNDLMIQQATV MG++F+TQ++L +AL+ KVG+
Sbjct: 552 LSVVNDLMIQQATVKMGNQFFTQDQLKVALTEKVGE 587
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/193 (58%), Positives = 139/193 (72%), Gaps = 10/193 (5%)
Query: 46 LNPETLQQRLLALIEGAKESWTYAIFWQPSYDYS------SGAPLLGWGDGYYKGXXXXX 99
+N + LQQRL ALIEGA E+WTYA+FWQ S+ ++ + LLGWGDGYYKG
Sbjct: 58 VNEDNLQQRLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEKS 117
Query: 100 XXXXXXXXXXXXXXQDHRKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFV 159
Q+HRK+V+RELNSLISG D A DEEVTDTEWFFLVSMTQSFV
Sbjct: 118 RKKKSNPASAAE--QEHRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFV 175
Query: 160 NGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELAST 219
G+GLPGQA+ NS+ +W+SGS+ L+GS+CERARQG ++GL+TMVC+ T NGVVEL S+
Sbjct: 176 KGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATE--NGVVELGSS 233
Query: 220 EVIPHSPDLMNKV 232
E+I S DL++KV
Sbjct: 234 EIIHQSSDLVDKV 246
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 174/261 (66%), Gaps = 21/261 (8%)
Query: 381 KRRSPGARSSVDNGMLSFTSGAILSDSNVKXXXXXXXXXXXXXXXXXIEASVVKEADSSR 440
KR S S+ D GMLSF++ + S +N +EASVVKEA
Sbjct: 348 KRTSVSKGSNNDEGMLSFST-VVRSAAN-------------DSDHSDLEASVVKEA---- 389
Query: 441 LVXX--XXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASL 498
+V ANGREEPLNHVEAERQRREKLNQRFY+LRAVVPNVSKMDKASL
Sbjct: 390 IVVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASL 449
Query: 499 LGDAIAFIEELNAKVKGAESEKAELEKQLESAKKE-LEAVSKNPPPPDKEADSNSTSCKL 557
LGDAI++I EL +K++ AES+K E++K+L+ KE ++++ + ++
Sbjct: 450 LGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASS 509
Query: 558 IDLVIDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVN 617
I++ IDVKI+GWD MIR++C KK+HP R M ALKELDL++ HAS++VVNDLMIQQATV
Sbjct: 510 IEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVK 569
Query: 618 MGSRFYTQEELLLALSSKVGD 638
MGS+F+ ++L +AL +KVG+
Sbjct: 570 MGSQFFNHDQLKVALMTKVGE 590
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 133/191 (69%), Gaps = 10/191 (5%)
Query: 46 LNPETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAP----LLGWGDGYYKGXXXXXXX 101
N +TLQQRL ALIE A E+WTYAIFWQ S+D+ S +LGWGDGYYK
Sbjct: 47 FNEDTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYK----GEED 102
Query: 102 XXXXXXXXXXXXQDHRKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFVNG 161
Q+HRK+V+RELNSLISG D + DEEVTDTEWFFLVSMTQSFVNG
Sbjct: 103 KEKKKNNTNTAEQEHRKRVIRELNSLISGGIGVSDESNDEEVTDTEWFFLVSMTQSFVNG 162
Query: 162 SGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEV 221
GLPG+++ NS +W+SGS L+GS CERA QG ++GL+TMVCI T NGVVEL S+EV
Sbjct: 163 VGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQ--NGVVELGSSEV 220
Query: 222 IPHSPDLMNKV 232
I S DLM+KV
Sbjct: 221 ISQSSDLMHKV 231
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 122/182 (67%), Gaps = 7/182 (3%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
A+GR++PLNHVEAER RREKLN RFYALRAVVPNVSKMDK SLL DA+ +I EL +K +
Sbjct: 335 AHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAEN 394
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIM-GWDAMIR 574
E EK +E Q KE+ P K + S K I+VKIM DAM+R
Sbjct: 395 VELEKHAIEIQFNEL-KEIAGQRNAIPSVCKYEEKASEMMK-----IEVKIMESDDAMVR 448
Query: 575 IECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALSS 634
+E +K +HP RLM AL +L+L++ HAS++V+NDLMIQQA V MG R Y QEEL L S
Sbjct: 449 VESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVKMGLRIYKQEELRDLLMS 508
Query: 635 KV 636
K+
Sbjct: 509 KI 510
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 116/193 (60%), Gaps = 10/193 (5%)
Query: 50 TLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXXXX 109
TL +RL A++ G E W+YAIFW+PSYD SG +L WGDG Y G
Sbjct: 33 TLPKRLHAVLNGTHEPWSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKT 92
Query: 110 XXXX---QDHRKKVLRELNSLISGNT-----ASPDVAVDEEVTDTEWFFLVSMTQSFVNG 161
++ R V+RELN +ISG D EVTD EWFFLVSMT SF NG
Sbjct: 93 ILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGNG 152
Query: 162 SGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEV 221
SGL G+A+ + N V V+GSD + GS C+RA+QG GL+T++CIP+ NGV+ELASTE
Sbjct: 153 SGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGLQTILCIPS--HNGVLELASTEE 210
Query: 222 IPHSPDLMNKVRI 234
I + DL N++R
Sbjct: 211 IRPNSDLFNRIRF 223
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 109/179 (60%), Gaps = 23/179 (12%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
ANGREEPLNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDAI++I+EL KVK
Sbjct: 387 ANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKI 446
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRI 575
E E+ +K L ++ V ++P +D++ M + ++R+
Sbjct: 447 MEDERVGTDKSL--SESNTITVEESPE-------------------VDIQAMNEEVVVRV 485
Query: 576 ECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATV--NMGSRFYTQEELLLAL 632
+HPA R++ A++ ++ L A +++ D M + N GS T+E+L+ A
Sbjct: 486 ISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLIAAF 544
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 45 MLNPETLQQRLLALIE---GAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXX 101
M +TL ++L +L++ SW YAIFWQ + SG +LGWGDG +
Sbjct: 42 MGTDDTLNKKLSSLVDWPNSENFSWNYAIFWQQTMS-RSGQQVLGWGDGCCREPNEEEES 100
Query: 102 XXXXXX------XXXXXXQDHRKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMT 155
QD RK+VL++L+ L G+ E+VT TE FFL SM
Sbjct: 101 KVVRSYNFNNMGAEEETWQDMRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMY 160
Query: 156 QSFVNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVE 215
F +G G PG+ Y + VW+S + C R+ G+RT+V +PT GV+E
Sbjct: 161 FFFNHGEGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDA--GVLE 218
Query: 216 LASTEVIPHSPDLMNKVR 233
L S +P + L+ V+
Sbjct: 219 LGSVWSLPENIGLVKSVQ 236
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 27/178 (15%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+++I EL+AK+K
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRI 575
E+E+ L S NPP +D I+V+ G D +RI
Sbjct: 485 MEAERERL------------GYSSNPPIS-------------LDSDINVQTSGEDVTVRI 519
Query: 576 ECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALS 633
C ++HPA R+ A +E +++ ++++ V D ++ V S T+E+L+ ALS
Sbjct: 520 NCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK--SEELTKEKLISALS 575
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 49 ETLQQRLLALIE---GAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXX 105
E LQ +L L+E + SW YAIFWQ S +G +L WGDGY +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRS-KAGDLVLCWGDGYCREPKEGEKSEIVR 104
Query: 106 XXXXXXXXQDH---RKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFVNGS 162
+ H RK+VL++L+ L G+ + VTDTE F L SM SF G
Sbjct: 105 ILSMGREEETHQTMRKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 163 GLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVI 222
G PG+ + ++ VW+S C R+ G++T+V +PT GVVEL ST +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDL--GVVELGSTSCL 222
Query: 223 PHSPDLMNKVR 233
P S D + +R
Sbjct: 223 PESEDSILSIR 233
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 27/178 (15%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+++I EL+AK+K
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRI 575
E+E+ L S NPP +D I+V+ G D +RI
Sbjct: 485 MEAERERL------------GYSSNPPIS-------------LDSDINVQTSGEDVTVRI 519
Query: 576 ECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALS 633
C ++HPA R+ A +E +++ ++++ V D ++ V S T+E+L+ ALS
Sbjct: 520 NCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK--SEELTKEKLISALS 575
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 49 ETLQQRLLALIE---GAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXX 105
E LQ +L L+E + SW YAIFWQ S +G +L WGDGY +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRS-KAGDLVLCWGDGYCREPKEGEKSEIVR 104
Query: 106 XXXXXXXXQDH---RKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFVNGS 162
+ H RK+VL++L+ L G+ + VTDTE F L SM SF G
Sbjct: 105 ILSMGREEETHQTMRKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 163 GLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVI 222
G PG+ + ++ VW+S C R+ G++T+V +PT GVVEL ST +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDL--GVVELGSTSCL 222
Query: 223 PHSPDLMNKVR 233
P S D + +R
Sbjct: 223 PESEDSILSIR 233
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 109/178 (61%), Gaps = 27/178 (15%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
ANGR E LNHVEAERQRREKLNQRFYALR+VVPN+SKMDKASLLGDA+++I EL+AK+K
Sbjct: 425 ANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKV 484
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRI 575
E+E+ L S NPP +D I+V+ G D +RI
Sbjct: 485 MEAERERL------------GYSSNPPIS-------------LDSDINVQTSGEDVTVRI 519
Query: 576 ECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALS 633
C ++HPA R+ A +E +++ ++++ V D ++ V S T+E+L+ ALS
Sbjct: 520 NCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVK--SEELTKEKLISALS 575
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 49 ETLQQRLLALIE---GAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXX 105
E LQ +L L+E + SW YAIFWQ S +G +L WGDGY +
Sbjct: 46 ENLQNKLSDLVERPNASNFSWNYAIFWQISRS-KAGDLVLCWGDGYCREPKEGEKSEIVR 104
Query: 106 XXXXXXXXQDH---RKKVLRELNSLISGNTASPDVAVDEEVTDTEWFFLVSMTQSFVNGS 162
+ H RK+VL++L+ L G+ + VTDTE F L SM SF G
Sbjct: 105 ILSMGREEETHQTMRKRVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGE 164
Query: 163 GLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVI 222
G PG+ + ++ VW+S C R+ G++T+V +PT GVVEL ST +
Sbjct: 165 GGPGKCFASAKPVWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDL--GVVELGSTSCL 222
Query: 223 PHSPDLMNKVR 233
P S D + +R
Sbjct: 223 PESEDSILSIR 233
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 99/143 (69%), Gaps = 2/143 (1%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAE 522
L+HVEAE+QRREKLN RFYALRA+VP VS+MDKASLL DA+++IE L +K+ E+E +
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 523 LEKQLESAKKELEAVSKNPPPPDKEADSN-STSCKLIDLVIDVKIMGWDAMIRIECKKKN 581
+ K E+ K + + + +P + + + S S + DL + VKI+G +A+IR++ + N
Sbjct: 308 M-KMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVN 366
Query: 582 HPAVRLMAALKELDLDLQHASVT 604
HP LM+AL E+D +QHA+ +
Sbjct: 367 HPTSALMSALMEMDCRVQHANAS 389
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 96/161 (59%), Gaps = 26/161 (16%)
Query: 456 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKG 515
ANGREE LNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLL DAI +I ++ K++
Sbjct: 312 ANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 516 AESEKAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRI 575
E+EK ++ K+ ES N P + +D + DA++R+
Sbjct: 372 YETEK-QIMKRRES----------NQITPAE---------------VDYQQRHDDAVVRL 405
Query: 576 ECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATV 616
C + HP +++ L+E ++ ++V + + ++ T+
Sbjct: 406 SCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTL 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 33 ATATAPGPDAQPMLNPET---LQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGD 89
+TA+A +++P + LQQ L ++EG+ W YA+FW S SS +L WGD
Sbjct: 29 STASASNTALSKLVSPPSDSNLQQGLRHVVEGS--DWDYALFWLASNVNSSDGCVLIWGD 86
Query: 90 GYYKGXXXXXXXXXXXXXXXXXXXQDH-RKKVLRELNSLISGNTASPDVAVDEEVTDTEW 148
G+ + QD +++VLR+L+ G+ + +TD +
Sbjct: 87 GHCR--------VKKGASGEDYSQQDEIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDM 138
Query: 149 FFLVSMTQSF---VNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQ--GHLFGLRTMV 203
F+L S+ SF N G P Y + +W +D S + R R G +T++
Sbjct: 139 FYLASLYFSFRCDTNKYG-PAGTYVSGKPLW--AADLPSCLSYYRVRSFLARSAGFQTVL 195
Query: 204 CIPTPCANGVVELASTEVIPHSPDLMNKVR 233
+P +GVVEL S IP ++ V+
Sbjct: 196 SVPV--NSGVVELGSLRHIPEDKSVIEMVK 223
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 52 QQRLLALIEGAKES--WTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXXXX 109
++ L L++ A +S WTY++FWQ + +L WG+GYY G
Sbjct: 17 KKELQGLLKTAVQSVDWTYSVFWQ----FCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTA 72
Query: 110 XXXXQDHRKKVLREL-NSLISGNTASPDVAVD----EEVTDTEWFFLVSMTQSFVNGSGL 164
+ R + LREL +L++G + S A E++T+TEWF+L+ ++ SF SG+
Sbjct: 73 EEAALE-RSQQLRELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGM 131
Query: 165 PGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVI 222
PG+AY VW+SG++ + RA ++T+VCIP +GVVEL +T+ +
Sbjct: 132 PGKAYARRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPM--LDGVVELGTTKKV 187
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 24/148 (16%)
Query: 461 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
E L+HV AER+RREKLN++F LR++VP V+KMDK S+LGD IA++ L +V E E
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVH--ELEN 417
Query: 521 AELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIECKKK 580
E+Q + + S+ ++V I+ D ++ + C+ +
Sbjct: 418 THHEQQHKRTRTCKRKTSEE---------------------VEVSIIENDVLLEMRCEYR 456
Query: 581 NHPAVRLMAALKELDLDLQHASVTVVND 608
+ + ++ L EL ++ A T VND
Sbjct: 457 DGLLLDILQVLHELGIETT-AVHTSVND 483
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 96/175 (54%), Gaps = 6/175 (3%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAI++IE L + K E+E ELE
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 525 KQLESAKKELEAVSKNPPPP-----DKEADSNSTSCKLIDLVIDVKIMGWDAM-IRIECK 578
+S+ + ++ P K+ DS S++ + L + V MG M + + C
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 579 KKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALS 633
K+ V+L + L+L + +++T + ++ + + Y L+ +S
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIELRPNIYWVVWFLVFMS 230
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAI++IE L + K E+E ELE
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 114
Query: 525 KQLESAKKELEAVSKNPPPP-----DKEADSNSTSCKLIDLVIDVKIMGWDAM-IRIECK 578
+S+ + ++ P K+ DS S++ + L + V MG M + + C
Sbjct: 115 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 174
Query: 579 KKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFYTQEELLLALSSKVG 637
K+ V+L + L+L + +++T + ++ TV + + QE L L + + +G
Sbjct: 175 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFH--TVFIEADEEEQEVLRLKIETGIG 231
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAI++IE L + K E+E ELE
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 525 KQLESAKKELEAVSKNPPPP-----DKEADSNSTSCKLIDLVIDVKIMGWDAM-IRIECK 578
+S+ + ++ P K+ DS S++ + L + V MG M + + C
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 579 KKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMG 619
K+ V+L + L+L + +++T + ++ + +
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEIA 216
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
++ +ER RR+KLNQR +ALR+VVPN++KMDKAS++ DAI++IE L + K E+E ELE
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 525 KQLESAKKELEAVSKNPPPP-----DKEADSNSTSCKLIDLVIDVKIMGWDAM-IRIECK 578
+S+ + ++ P K+ DS S++ + L + V MG M + + C
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 579 KKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMG 619
K+ V+L + L+L + +++T + ++ + +
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEVS 216
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 88/145 (60%), Gaps = 11/145 (7%)
Query: 464 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAEL 523
+H+ AER+RREKL QRF AL A+VP + KMDKAS+LGDA+ I+ L +V E +K
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKK-- 209
Query: 524 EKQLESAKKELEAVSKNPPPPDKEADSNSTSCK--LIDL---VIDVKIMGWDAMIRIECK 578
E++LES + V K+ D S S+SC+ DL I+V+ D +I+I C+
Sbjct: 210 ERRLES----MVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCE 265
Query: 579 KKNHPAVRLMAALKELDLDLQHASV 603
K+ ++MA +++L + + ++SV
Sbjct: 266 KQKGHLAKIMAEIEKLHILITNSSV 290
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 48 PETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXX 107
P+ L+++L + + W+Y IFW S +S +L WGDGYY G
Sbjct: 10 PDNLKKQLAVSVRNIQ--WSYGIFWSVS---ASQPGVLEWGDGYYNGDIKTRKTIQAAEV 64
Query: 108 XXXXXXQDHRKKVLREL------------NSLISGNTASPDVAVDEEVTDTEWFFLVSMT 155
+ R + LREL S AS E++TDTEW++LV M+
Sbjct: 65 KIDQLGLE-RSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMS 123
Query: 156 QSFVNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVE 215
F G G+PG A N +W+ ++ R+ L+T+VC P GV+E
Sbjct: 124 FVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPF--LGGVLE 181
Query: 216 LASTEVIPHSPDLMNKVR 233
+ +TE I +++ V+
Sbjct: 182 IGTTEHIKEDMNVIQSVK 199
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 29/160 (18%)
Query: 460 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESE 519
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I ++++L +V+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ----- 455
Query: 520 KAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCK--------------------LID 559
ELE ESA E PD E + S +C
Sbjct: 456 --ELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAG 513
Query: 560 LVIDVKI--MGWDAMIRIECKKKNHPAVRLMAALKELDLD 597
L +++I +G + +I + C + + +M + +L+LD
Sbjct: 514 LTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLD 553
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 48 PETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXX 107
P+ L+++L + + W+Y IFW S +S +L WGDGYY G
Sbjct: 10 PDNLKKQLAVSVRNIQ--WSYGIFWSVS---ASQPGVLEWGDGYYNGDIKTRKTIQAAEV 64
Query: 108 XXXXXXQDHRKKVLREL------------NSLISGNTASPDVAVDEEVTDTEWFFLVSMT 155
+ R + LREL S AS E++TDTEW++LV M+
Sbjct: 65 KIDQLGLE-RSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMS 123
Query: 156 QSFVNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVE 215
F G G+PG A N +W+ ++ R+ L+T+VC P GV+E
Sbjct: 124 FVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPF--LGGVLE 181
Query: 216 LASTEVIPHSPDLMNKVR 233
+ +TE I +++ V+
Sbjct: 182 IGTTEHIKEDMNVIQSVK 199
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 29/160 (18%)
Query: 460 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESE 519
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I ++++L +V+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ----- 455
Query: 520 KAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCK--------------------LID 559
ELE ESA E PD E + S +C
Sbjct: 456 --ELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAG 513
Query: 560 LVIDVKI--MGWDAMIRIECKKKNHPAVRLMAALKELDLD 597
L +++I +G + +I + C + + +M + +L+LD
Sbjct: 514 LTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLD 553
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 48 PETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXX 107
P+ L+++L + + W+Y IFW S +S +L WGDGYY G
Sbjct: 10 PDNLKKQLAVSVRNIQ--WSYGIFWSVS---ASQPGVLEWGDGYYNGDIKTRKTIQAAEV 64
Query: 108 XXXXXXQDHRKKVLREL------------NSLISGNTASPDVAVDEEVTDTEWFFLVSMT 155
+ R + LREL S AS E++TDTEW++LV M+
Sbjct: 65 KIDQLGLE-RSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMS 123
Query: 156 QSFVNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVE 215
F G G+PG A N +W+ ++ R+ L+T+VC P GV+E
Sbjct: 124 FVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPF--LGGVLE 181
Query: 216 LASTEVIPHSPDLMNKVR 233
+ +TE I +++ V+
Sbjct: 182 IGTTEHIKEDMNVIQSVK 199
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 29/160 (18%)
Query: 460 EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESE 519
EE NH +E++RREKLN+RF LR+++P++SK+DK S+L D I ++++L +V+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQ----- 455
Query: 520 KAELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCK--------------------LID 559
ELE ESA E PD E + S +C
Sbjct: 456 --ELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAG 513
Query: 560 LVIDVKI--MGWDAMIRIECKKKNHPAVRLMAALKELDLD 597
L +++I +G + +I + C + + +M + +L+LD
Sbjct: 514 LTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLD 553
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 18/152 (11%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I +++EL + K E+E ELE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 525 KQ---LES---------AKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIM--GW- 569
+ LE+ A+ L+ S N K+ S ++ I+V M W
Sbjct: 115 SRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWM 174
Query: 570 ---DAMIRIECKKKNHPAVRLMAALKELDLDL 598
++ I C KK V+L L+ L+L++
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNI 206
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 464 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAEL 523
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI I+ L VK E +K
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKK-- 183
Query: 524 EKQLES---AKKELEAVSKNPPPPDKEADSNSTSCKLIDL-VIDVKIMGWDAMIRIECKK 579
EK +ES KK + +N P + + + +L I+V++ G D +I+I C+K
Sbjct: 184 EKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEK 243
Query: 580 KNHPAVRLMAALKELDLDLQHASV 603
+ +++M +++L L + +++V
Sbjct: 244 QKGNVIKIMGEIEKLGLSITNSNV 267
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 464 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAEL 523
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI I+ L VK E +K
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKK-- 183
Query: 524 EKQLES---AKKELEAVSKNPPPPDKEADSNSTSCKLIDL-VIDVKIMGWDAMIRIECKK 579
EK +ES KK + +N P + + + +L I+V++ G D +I+I C+K
Sbjct: 184 EKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEK 243
Query: 580 KNHPAVRLMAALKELDLDLQHASV 603
+ +++M +++L L + +++V
Sbjct: 244 QKGNVIKIMGEIEKLGLSITNSNV 267
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 18/152 (11%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I +++EL + K E+E ELE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 525 KQ---LES---------AKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMG--W- 569
+ LE+ A+ L+ S N K+ S ++ I+V M W
Sbjct: 115 SRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWM 174
Query: 570 ---DAMIRIECKKKNHPAVRLMAALKELDLDL 598
++ I C KK V+L L+ L+L++
Sbjct: 175 GEKTVVVCITCSKKRETMVQLCKVLESLNLNI 206
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 462 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKA 521
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI +++EL ++
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 317
Query: 522 ELEKQLESAKKELEAVSKNPPPPD------KEADSNSTSC---KLIDLVIDVKIMGWDAM 572
+L +LES ++ P P KE S+S K ++V++ A+
Sbjct: 318 DLHTELESTPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAV 377
Query: 573 -IRIECKKKNHPAVRLMAALKELDLDLQHASVTVVN 607
I + C ++ + M AL L LD+Q A ++ N
Sbjct: 378 NIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFN 413
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 17/137 (12%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
+V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I +++EL + K E+E ELE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 525 KQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKI--MGWDAMIR-IECKKKN 581
+ + ++ ++ P + V+++K+ MG ++ I C KK
Sbjct: 115 SRSTLLENPMDYSTRVQHYPIE--------------VLEMKVTWMGEKTVVVCITCSKKR 160
Query: 582 HPAVRLMAALKELDLDL 598
V+L L+ L+L++
Sbjct: 161 ETMVQLCKVLESLNLNI 177
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 48 PETLQQRLLALIEGAKESWTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXX 107
PE L++ L + + W+Y IFW S +S + +L WGDGYY G
Sbjct: 11 PENLKKHLAVSVRNIQ--WSYGIFWSVS---ASQSGVLEWGDGYYNGDIKTRKTIQASEI 65
Query: 108 XXXXXXQDHRKKVLRELNSLISGNT---------------ASPDVAVDEEVTDTEWFFLV 152
R + L EL +S AS E++ DTEW++LV
Sbjct: 66 KADQLGL-RRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLV 124
Query: 153 SMTQSFVNGSGLPGQAYFNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANG 212
M+ F G G+PG+ + N +W+ + R+ ++T+VC P G
Sbjct: 125 CMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPF--LGG 182
Query: 213 VVELASTEVIPHSPDLMNKVR 233
VVE+ +TE I +++ V+
Sbjct: 183 VVEIGTTEHITEDMNVIQCVK 203
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 44/61 (72%)
Query: 458 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAE 517
R+E NH E++RREKLN+RF LR ++P+++K+DK S+L D I +++EL +V+ E
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 518 S 518
S
Sbjct: 495 S 495
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 85/156 (54%), Gaps = 19/156 (12%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQL 527
AER+RR+KLN R YALR++VP ++K+D+AS+LGDAI +++EL + K + E E +
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETE 377
Query: 528 ESAKKELEAVSKNPP-----PPDKEADSNSTSCKL-IDL------------VIDV-KIMG 568
+ + + +S N P +SN S K +DL +DV ++ G
Sbjct: 378 DGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDG 437
Query: 569 WDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVT 604
+ +++ C+ K RLM AL L L++ +A+ T
Sbjct: 438 REFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTT 473
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 29/168 (17%)
Query: 462 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKA 521
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI +++EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 357
Query: 522 ELEKQLESAKK---ELEAVSKNPPPPDKEADSNSTSCKLIDLV--------------IDV 564
+L +LES + S +P P + + SC++ + + ++V
Sbjct: 358 DLHNELESTPPGSLPPTSSSFHPLTPTPQ----TLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 565 KIM-GWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMI 611
++ G I + C ++ + M AL L LD+Q A ++ N +
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 29/168 (17%)
Query: 462 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKA 521
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI +++EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 357
Query: 522 ELEKQLESAKK---ELEAVSKNPPPPDKEADSNSTSCKLIDLV--------------IDV 564
+L +LES + S +P P + + SC++ + + ++V
Sbjct: 358 DLHNELESTPPGSLPPTSSSFHPLTPTPQ----TLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 565 KIM-GWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMI 611
++ G I + C ++ + M AL L LD+Q A ++ N +
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 29/168 (17%)
Query: 462 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKA 521
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI +++EL ++
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN------- 357
Query: 522 ELEKQLESAKK---ELEAVSKNPPPPDKEADSNSTSCKLIDLV--------------IDV 564
+L +LES + S +P P + + SC++ + + ++V
Sbjct: 358 DLHNELESTPPGSLPPTSSSFHPLTPTPQ----TLSCRVKEELCPSSLPSPKGQQARVEV 413
Query: 565 KIM-GWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMI 611
++ G I + C ++ + M AL L LD+Q A ++ N +
Sbjct: 414 RLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFAL 461
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 23/138 (16%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQL 527
+ER+RR ++ + YALR++VPN++KMDKAS++GDA+ +++EL ++ K +S+ A LE L
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASL 194
Query: 528 ES----------AKKELEAVSKNPPPPDKEADSNSTSCKLIDL-VIDVKIMGWDAMIRIE 576
S A+K NPP S K+I + VI V+ G+ +R+
Sbjct: 195 NSTGGYQEHAPDAQKTQPFRGINPP----------ASKKIIQMDVIQVEEKGF--YVRLV 242
Query: 577 CKKKNHPAVRLMAALKEL 594
C K A L +L+ L
Sbjct: 243 CNKGEGVAPSLYKSLESL 260
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 11/95 (11%)
Query: 466 VEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEK 525
V +ER RR+KLNQR +ALR+VVPN+SK+DKAS++ D+I +++EL + EK
Sbjct: 56 VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQEL-----------IDQEK 104
Query: 526 QLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDL 560
LE+ +ELE+ S P ++ D N L D
Sbjct: 105 TLEAEIRELESRSTLLENPVRDYDCNFAETHLQDF 139
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 30/193 (15%)
Query: 461 EPLNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAFIEELNAKVKGAES 518
+ + H+ ER RR+++N+ LR+++P V + D+AS++G AI F+ EL ++ ES
Sbjct: 195 QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 254
Query: 519 EKA---------ELEKQLESAKKELEAVSKNPPPPD--------------KEADSNSTSC 555
+K ++ S+ + V+ P +E + + SC
Sbjct: 255 QKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSC 314
Query: 556 KLIDLVIDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQAT 615
L D ++VK++G+DAMI+I +++ ++ +AAL++L L + H ++T + ++
Sbjct: 315 -LAD--VEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371
Query: 616 VNMGS--RFYTQE 626
V + S RF ++
Sbjct: 372 VKITSETRFTAED 384
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 458 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVK 514
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI +++L +VK
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 515 GAESEKAELEKQLES---AKKELEAVSKNPPPPDKEADSNSTSCKLIDLV---------I 562
E E+ +K +S K+ + + + S D V I
Sbjct: 183 KLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMI 242
Query: 563 DVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDL 598
+ ++ D +IR+ C+K ++++++L++ L++
Sbjct: 243 EARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEV 278
>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:217106-219684
REVERSE LENGTH=526
Length = 526
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 66 WTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXXXXXXXXQDHRKKVLRELN 125
W+YAIFW S + +L WG+G Y G +K+ +
Sbjct: 36 WSYAIFWSSSL---TQPGVLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYLSML 92
Query: 126 SLISGNTASPD----------------VAVDEEVTDTEWFFLVSMTQSFVNGSGLPGQAY 169
SG T S + ++++D EW++LVSM+ F LPG+A
Sbjct: 93 EGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPGRAS 152
Query: 170 FNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVIPHSPDLM 229
+W+ + R+ ++T+VC P GV+EL TE+I +L+
Sbjct: 153 ATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPY--LGGVIELGVTELISEDHNLL 210
Query: 230 NKVR 233
++
Sbjct: 211 RNIK 214
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 473 REKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAE---LEKQLES 529
R K N++F LR +VP V+++DK S+L + I +++EL A+V+ ES +E+Q ++
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 530 AKK-----ELEAVSKNPPPPDKEADSNSTSCKLIDLVID-----VKIMGWDAMIRIECKK 579
+ +E S N K D NS + + + D VK+ + +I + C
Sbjct: 406 TENLNDSVLIEETSGNYDDSTK-IDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSY 464
Query: 580 KNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRF 622
+++ +M L L +D +N + T+N+ ++F
Sbjct: 465 RDYIVADIMETLSNLHMDAFSVRSHTLNKFL----TLNLKAKF 503
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 10/144 (6%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
HV AER+RREKL+++F AL A++P + K DK ++L DAI+ +++L +++ + EK E
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEK-EAT 178
Query: 525 KQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDL-----VIDVKIMGWDAMIRIECKK 579
+Q+ES + V K+ D+E + + + I+ I+ KI D +IRI C+K
Sbjct: 179 RQMES----MILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEK 234
Query: 580 KNHPAVRLMAALKELDLDLQHASV 603
+ ++ ++ L ++++ V
Sbjct: 235 SKGCMINILNTIENFQLRIENSIV 258
>AT4G00480.2 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:216866-219684
REVERSE LENGTH=580
Length = 580
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 21/184 (11%)
Query: 66 WTYAIFWQPSYDYSSGAPLLGWGDGYYKGXXXXXXXXXXXXXXXXXXXQDHRKKVLRELN 125
W+YAIFW S + +L WG+G Y G +K+ +
Sbjct: 36 WSYAIFWSSSL---TQPGVLEWGEGCYNGDMKKRKKSYESHYKYGLQKSKELRKLYLSML 92
Query: 126 SLISGNTASPD----------------VAVDEEVTDTEWFFLVSMTQSFVNGSGLPGQAY 169
SG T S + ++++D EW++LVSM+ F LPG+A
Sbjct: 93 EGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPGRAS 152
Query: 170 FNSNAVWVSGSDRLSGSACERARQGHLFGLRTMVCIPTPCANGVVELASTEVIPHSPDLM 229
+W+ + R+ ++T+VC P GV+EL TE+I +L+
Sbjct: 153 ATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPY--LGGVIELGVTELISEDHNLL 210
Query: 230 NKVR 233
++
Sbjct: 211 RNIK 214
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 473 REKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAE---LEKQLES 529
R K N++F LR +VP V+++DK S+L + I +++EL A+V+ ES +E+Q ++
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 530 AKK-----ELEAVSKNPPPPDKEADSNSTSCKLIDLVID-----VKIMGWDAMIRIECKK 579
+ +E S N K D NS + + + D VK+ + +I + C
Sbjct: 406 TENLNDSVLIEETSGNYDDSTK-IDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSY 464
Query: 580 KNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRF 622
+++ +M L L +D +N + T+N+ ++F
Sbjct: 465 RDYIVADIMETLSNLHMDAFSVRSHTLNKFL----TLNLKAKF 503
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 8/156 (5%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELE 524
++EAER+RREKL+ R ALR+ VP V+ M KAS++ DAI +I EL VK E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNL----LETF 88
Query: 525 KQLESAKKELEAVSKNP--PPPDKEADSNSTSCKL-IDLVIDV-KIMGWDAMIRIECKKK 580
++E A E++ +P P + +D N KL I+ + + KI ++I +K+
Sbjct: 89 HEMEEAPPEIDEEQTDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKR 148
Query: 581 NHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATV 616
+ + M ++ L ++ S+T N ++ A+V
Sbjct: 149 DGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASV 184
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 461 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+P ++ AER+RR++LN R LR++VP ++KMD+ S+LGDAI +++EL K+ + ++
Sbjct: 148 QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDE 207
Query: 521 AELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIECKKK 580
EL + L + N + NS L +V + I I C K
Sbjct: 208 QEL-----GSNSHLSTLITN-----ESMVRNS-------LKFEVDQREVNTHIDICCPTK 250
Query: 581 NHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSRFY 623
V ++ L+ L L+++ ++ +D +Q + +G + Y
Sbjct: 251 PGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRY 293
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 86/157 (54%), Gaps = 12/157 (7%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKA--- 521
++ +ER+RRE++NQ Y LRAVVP ++K++K + DA+ +I EL + + E E
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGIN 324
Query: 522 ELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMG-WDAMIRIECKKK 580
E+E + E A +E A++ P ++ + ++ K ++ I+V G D +IR+ + K
Sbjct: 325 EMECK-EIAAEEQSAIAD--PEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHK 381
Query: 581 NHPAVRLMAA-----LKELDLDLQHASVTVVNDLMIQ 612
RL+ A L+ +D++ +TV+ L ++
Sbjct: 382 QDGFKRLIEAVDLCELEIIDVNFTRLDLTVMTVLNVK 418
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 38/49 (77%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKV 513
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I ++++L A+V
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 32/190 (16%)
Query: 461 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI +++EL K+ + E+
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 521 AELEKQLESAKKEL----------EAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWD 570
EL S +L E + +N P ++ D
Sbjct: 235 QELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK------------------FEIDRRDED 276
Query: 571 AMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNMGSR---FYTQEE 627
+ I C K + + L+ L L+++ ++ +D + QA+ + G+ F T E+
Sbjct: 277 TRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSL-QASCSEGAEQRDFITSED 335
Query: 628 LLLALSSKVG 637
+ AL G
Sbjct: 336 IKQALFRNAG 345
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQ- 526
ER+RR N RF+ L+ ++PN +K+D+AS++G+AI +I+EL ++ E K +EK+
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL---LRTIEEFKMLVEKKR 307
Query: 527 ---LESAKKELEAVSKNPP-----------PPDKEAD--------SNSTSCKLID----- 559
S K+ P E D +NS C +
Sbjct: 308 CGRFRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKV 367
Query: 560 LVIDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHAS 602
+DV+I+ + I++ KKK + + L +L LDL H +
Sbjct: 368 TEVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVA 410
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 461 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGDAI +++EL K+ + E+
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 521 AEL 523
EL
Sbjct: 235 QEL 237
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+NH+ ER RR ++N+ +LRA++P + + D+AS++G AI +++ L ++ ES+K
Sbjct: 127 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 186
Query: 521 AELEKQ----LESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIE 576
++ +E+A L +S N D +C I+ ++ ++++
Sbjct: 187 RTQQQSNSEVVENALNHLSGISSN----DLWTTLEDQTCI---PKIEATVIQNHVSLKVQ 239
Query: 577 CKKKNHPAVRLMAALKELDLDLQHASVT 604
C+KK ++ + +L++L L + H ++T
Sbjct: 240 CEKKQGQLLKGIISLEKLKLTVLHLNIT 267
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+NH+ ER RR ++N+ +LRA++P + + D+AS++G AI +++ L ++ ES+K
Sbjct: 178 INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQK 237
Query: 521 AELEKQ----LESAKKELEAVSKNPPPPDKEADSNSTSCKLIDLVIDVKIMGWDAMIRIE 576
++ +E+A L +S N D +C I+ ++ ++++
Sbjct: 238 RTQQQSNSEVVENALNHLSGISSN----DLWTTLEDQTCI---PKIEATVIQNHVSLKVQ 290
Query: 577 CKKKNHPAVRLMAALKELDLDLQHASVT 604
C+KK ++ + +L++L L + H ++T
Sbjct: 291 CEKKQGQLLKGIISLEKLKLTVLHLNIT 318
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQ- 526
ER+RR RF L+ ++PN +K D+AS++G+AI +I+EL ++ + K +EK+
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKEL---LRTIDEFKLLVEKKR 276
Query: 527 LESAKKELEAVSKNPPPPDKEA--------DSNSTSC-------KLIDLVIDVKIMGWDA 571
++ +E + V E +N+ C K D +DV+I+ +
Sbjct: 277 VKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTD--VDVRIIDDEV 334
Query: 572 MIRIECKKKNHPAVRLMAALKELDLDLQHAS 602
I+I KKK + + + + +L+LDL H +
Sbjct: 335 TIKIVQKKKINCLLFVSKVVDQLELDLHHVA 365
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 21/151 (13%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQ- 526
ER+RR RF L+ ++PN +K D+AS++G+AI +I+EL ++ + K +EK+
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKEL---LRTIDEFKLLVEKKR 276
Query: 527 LESAKKELEAVSKNPPPPDKEA--------DSNSTSC-------KLIDLVIDVKIMGWDA 571
++ +E + V E +N+ C K D +DV+I+ +
Sbjct: 277 VKQRNREGDDVVDENFKAQSEVVEQCLINKKNNALRCSWLKRKSKFTD--VDVRIIDDEV 334
Query: 572 MIRIECKKKNHPAVRLMAALKELDLDLQHAS 602
I+I KKK + + + + +L+LDL H +
Sbjct: 335 TIKIVQKKKINCLLFVSKVVDQLELDLHHVA 365
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+ H+ ER RR+++N+ LR+++P + D+AS++G AI +++EL ++ E
Sbjct: 125 MTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPV 184
Query: 521 AELEKQLESAKKELEAVSKNPPPPDK------EADSNSTSCKLIDLV--IDVKIMGWDAM 572
+ + + + S + P + + TS + + I+V ++ A
Sbjct: 185 KTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHAS 244
Query: 573 IRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNM--GSRFYTQEELLL 630
++I KK+ ++L+++++ L L L H +VT +D ++ +V + GS+ T E++
Sbjct: 245 LKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAA 304
Query: 631 ALS 633
A++
Sbjct: 305 AVN 307
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 49/203 (24%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+ H+ ER RR+++N+ LR+++P+ + D+AS++G AI +++EL ++ E ++
Sbjct: 115 MTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKR 174
Query: 521 AELEKQLESAKKELEAVSKNPPPPDKEADSNSTSC---KLIDLV---------------- 561
D + D STS D
Sbjct: 175 TRTH--------------------DPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214
Query: 562 ------IDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQAT 615
I+V + A I+I KKK ++L+ +L+ L L L H +VT +++ ++ +
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSIS 274
Query: 616 VNM--GSRFYTQEELLLALSSKV 636
V + GS+ T +++ AL+ +
Sbjct: 275 VRVEEGSQLNTVDDIATALNQTI 297
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVK 514
H +AER+RR ++N +F LR ++PN+ K DKAS+LG+ + + EL V+
Sbjct: 1353 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 1402
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 79/153 (51%), Gaps = 22/153 (14%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+ H+ ER RR ++N +LR+++P+ + + D+AS++G AI F++ L +++ E++K
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 521 AELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKLI---------DLVIDVKIMGWDA 571
+Q + K+++ P+ + N +S KL L I+ ++
Sbjct: 253 R--SQQSDDNKEQI---------PEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHV 301
Query: 572 MIRIECKKKNHPAVRLMAALKELDLDLQHASVT 604
++I+C +K +R + L++L + H ++T
Sbjct: 302 NLKIQCTRKQGQLLRSIILLEKLRFTVLHLNIT 334
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 77/170 (45%), Gaps = 42/170 (24%)
Query: 468 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVKGAESEKAELEKQL 527
ER+RR LN+R+ AL+ ++P+ SK D+AS+L D I +I EL +V +EL+ +
Sbjct: 218 TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRV-------SELKYLV 270
Query: 528 ESAK----------------------------KELEAVSKNPPPP--DKEADSNSTSCKL 557
E + + E + K P D+ + +NS C
Sbjct: 271 ERKRCGGRHKNNEVDDNNNNKNLDDHGNEDDDDDDENMEKKPESDVIDQCSSNNSLRCSW 330
Query: 558 ID-----LVIDVKIMGWDAMIRIECKKKNHPAVRLMAALKELDLDLQHAS 602
+ +DV+I+ + I++ KKK + + + L +L LDL H +
Sbjct: 331 LQRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVA 380
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 39/50 (78%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVK 514
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI +++ L +V+
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 39/50 (78%)
Query: 465 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAFIEELNAKVK 514
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI +++ L +V+
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQ 397
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+ H+ ER RR ++NQ LR+++P K D+AS++G AI FI+EL K+ E++K
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 463 LNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAFIEELNAKVKGAESEK 520
+ H+ ER RR ++N+ +LR+++P + + D+AS++G AI FI+EL ++ E+EK
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
Query: 521 A-----ELEKQLESAKKELEAVSKNPPPPDKEADSNSTSCKL---IDLVIDVKIMGWDAM 572
E K + A + + N + + ++ ++
Sbjct: 175 RKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVS 234
Query: 573 IRIECKKKNHPAVRLMAALKELDLDLQHASVTVVNDLMIQQATVNM--GSRFYTQEELLL 630
+++ CK+ ++ + +++EL L + H +++ D +I + M G + + +E+
Sbjct: 235 LKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEIAT 294
Query: 631 AL 632
A+
Sbjct: 295 AV 296