Miyakogusa Predicted Gene

Lj0g3v0342969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0342969.1 Non Chatacterized Hit- tr|I1LNB4|I1LNB4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13892
PE,70,0.000006,seg,NULL,CUFF.23539.1
         (41 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g37330.1                                                        49   1e-06
Glyma11g37330.2                                                        49   1e-06
Glyma11g37330.3                                                        49   1e-06

>Glyma11g37330.1 
          Length = 574

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 1  MNEEIKSEFRKSRFHLNKXXXXXXXSKCVTFCINYSLSPS 40
          M EEIKSEF++S F L         SKCVTFCINYSL+PS
Sbjct: 1  MEEEIKSEFKRSGFGLEDEQEIL--SKCVTFCINYSLTPS 38


>Glyma11g37330.2 
          Length = 533

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 1  MNEEIKSEFRKSRFHLNKXXXXXXXSKCVTFCINYSLSPS 40
          M EEIKSEF++S F L         SKCVTFCINYSL+PS
Sbjct: 1  MEEEIKSEFKRSGFGLEDEQEIL--SKCVTFCINYSLTPS 38


>Glyma11g37330.3 
          Length = 443

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 2/40 (5%)

Query: 1  MNEEIKSEFRKSRFHLNKXXXXXXXSKCVTFCINYSLSPS 40
          M EEIKSEF++S F L         SKCVTFCINYSL+PS
Sbjct: 1  MEEEIKSEFKRSGFGLEDEQEIL--SKCVTFCINYSLTPS 38