Miyakogusa Predicted Gene

Lj0g3v0341919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341919.1 Non Chatacterized Hit- tr|I1J6F0|I1J6F0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,96.13,0,EFG_IV,Translation elongation factor EFG/EF2, domain IV;
EF-G C-terminal domain-like,Elongation fact,CUFF.23591.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g14800.1                                                       318   1e-87
Glyma11g16460.1                                                       317   3e-87
Glyma05g04210.1                                                       146   1e-35
Glyma17g14650.1                                                       142   1e-34
Glyma08g18110.2                                                        54   7e-08
Glyma15g40860.1                                                        54   7e-08
Glyma08g18110.1                                                        54   7e-08
Glyma09g42050.1                                                        48   3e-06

>Glyma01g14800.1 
          Length = 431

 Score =  318 bits (815), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 151/155 (97%), Positives = 154/155 (99%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
           MHSDEMEDIQEAHAGQIVAVFGV+CASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD
Sbjct: 91  MHSDEMEDIQEAHAGQIVAVFGVECASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 150

Query: 61  SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
           SGGQFSKALNRFQ+EDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP
Sbjct: 151 SGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 210

Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
           RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 211 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 245


>Glyma11g16460.1 
          Length = 564

 Score =  317 bits (812), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 151/153 (98%), Positives = 152/153 (99%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
           MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD
Sbjct: 411 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 470

Query: 61  SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
           SGGQFSKALNRFQ+EDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP
Sbjct: 471 SGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 530

Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTG 153
           RVNFRETVTQRADFDYLHKKQSGGQGQYGRV G
Sbjct: 531 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIG 563


>Glyma05g04210.1 
          Length = 780

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 106/153 (69%), Gaps = 1/153 (0%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
           MH++  ED++ A AG I+A+ G+ D  +G+T  D      +  M+ P+PV+ +A++P +K
Sbjct: 442 MHANSREDVKVALAGDIIALAGLKDTITGETLCDPDNPIVLERMDFPDPVIKVAIEPKTK 501

Query: 60  DSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGK 119
               + +  L +  +EDP+F    D E  QT+I GMGELHL+I V+R++RE+KV+A+VG 
Sbjct: 502 ADVDKMATGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGA 561

Query: 120 PRVNFRETVTQRADFDYLHKKQSGGQGQYGRVT 152
           P+VN+RE++++ A+  Y+HKKQSGGQGQ+  +T
Sbjct: 562 PQVNYRESISKTAEVKYVHKKQSGGQGQFADIT 594


>Glyma17g14650.1 
          Length = 787

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 106/153 (69%), Gaps = 1/153 (0%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
           MH++  +D++ A AG I+A+ G+ D  +G+T  D      +  M+ P+PV+ +A++P +K
Sbjct: 449 MHANSRDDVKVALAGDIIALAGLKDTITGETLCDPDNPIVLERMDFPDPVIKVAIEPKTK 508

Query: 60  DSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGK 119
               + +  L +  +EDP+F    D E  QT+I GMGELHL+I V+R++RE+KV+A+VG 
Sbjct: 509 ADVDKMATGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGA 568

Query: 120 PRVNFRETVTQRADFDYLHKKQSGGQGQYGRVT 152
           P+VN+RE++++ ++  Y+HKKQSGGQGQ+  +T
Sbjct: 569 PQVNYRESISKISEVKYVHKKQSGGQGQFADIT 601


>Glyma08g18110.2 
          Length = 788

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 20/139 (14%)

Query: 7   EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
           E +++   G  VA+ G+D       T T+          ++K++++      PV+ +AVQ
Sbjct: 386 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 439

Query: 56  PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
                   +  + L R  + DP     ++ ESG+ I++G GELHL+I ++ ++ ++   A
Sbjct: 440 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 498

Query: 116 SVGK--PRVNFRETVTQRA 132
            + K  P V+FRETV +R+
Sbjct: 499 EIIKSDPVVSFRETVLERS 517


>Glyma15g40860.1 
          Length = 843

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 20/139 (14%)

Query: 7   EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
           E +++   G  VA+ G+D       T T+          ++K++++      PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494

Query: 56  PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
                   +  + L R  + DP     ++ ESG+ I++G GELHL+I ++ ++ ++   A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553

Query: 116 SVGK--PRVNFRETVTQRA 132
            + K  P V+FRETV +R+
Sbjct: 554 EIIKSDPVVSFRETVLERS 572


>Glyma08g18110.1 
          Length = 843

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 20/139 (14%)

Query: 7   EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
           E +++   G  VA+ G+D       T T+          ++K++++      PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494

Query: 56  PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
                   +  + L R  + DP     ++ ESG+ I++G GELHL+I ++ ++ ++   A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553

Query: 116 SVGK--PRVNFRETVTQRA 132
            + K  P V+FRETV +R+
Sbjct: 554 EIIKSDPVVSFRETVLERS 572


>Glyma09g42050.1 
          Length = 1001

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVK--YTMTSMNVP-EPVMSLAVQPV 57
           M    ++ +  A AG IVA+ G+      + T  S K  +  +SM     P + +A++P 
Sbjct: 467 MMGQGLKVVTSARAGNIVAIAGLGQHILKSATLSSTKNCWPFSSMAFQVAPTLRVAIEPS 526

Query: 58  SKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREY-KVDAS 116
                G   K L    R DP   V +    G+ +++  GE+HL+  ++ ++  + KV   
Sbjct: 527 DPADVGALLKGLRLLNRADPFVEVTVSGR-GEHVLAAAGEVHLERCIKDLKERFAKVSLE 585

Query: 117 VGKPRVNFRET-------------VTQRADFDYLHKKQSGGQ 145
           V  P V+++ET             V  R   DY+ K    G+
Sbjct: 586 VSPPLVSYKETIEGDALNVMENLKVLSRRSSDYVEKTTPNGR 627