Miyakogusa Predicted Gene
- Lj0g3v0341919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0341919.1 Non Characterized Hit- tr|I1J6F0|I1J6F0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,96.13,0,EFG_IV,Translation elongation factor EFG/EF2, domain IV;
EF-G C-terminal domain-like,Elongation fact,CUFF.23591.1
(155 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g044770.1 | translation elongation factor EF protein | HC ... 314 2e-86
Medtr7g044770.4 | translation elongation factor EF protein | HC ... 313 4e-86
Medtr7g044770.5 | translation elongation factor EF protein | HC ... 313 4e-86
Medtr7g044770.2 | translation elongation factor EF protein | HC ... 313 4e-86
Medtr7g044770.3 | translation elongation factor EF protein | HC ... 313 4e-86
Medtr2g020660.1 | translation elongation factor EF protein | HC ... 302 1e-82
Medtr4g101750.1 | translation elongation factor EF protein | HC ... 143 8e-35
Medtr4g101750.2 | translation elongation factor EF protein | HC ... 143 8e-35
Medtr8g104240.1 | transmembrane protein, putative | LC | chr8:43... 91 6e-19
Medtr4g101740.1 | translation elongation factor EF protein | HC ... 91 6e-19
Medtr5g083100.1 | elongation factor Tu domain 2 protein | LC | c... 84 5e-17
Medtr8g105040.1 | translation elongation factor EF protein | LC ... 70 9e-13
Medtr3g014380.1 | translation elongation factor G, putative | LC... 66 1e-11
Medtr8g105060.1 | elongation factor G | LC | chr8:44307976-44306... 64 4e-11
Medtr4g051702.1 | elongation factor G | LC | chr4:18703124-18701... 64 5e-11
Medtr8g104250.1 | elongation factor | HC | chr8:43897420-4389611... 63 1e-10
Medtr6g023380.1 | translation elongation factor EF protein | LC ... 62 2e-10
Medtr2g029210.1 | elongation factor Tu domain protein | LC | chr... 62 2e-10
Medtr8g105070.1 | elongation factor Tu domain protein | LC | chr... 59 2e-09
Medtr6g004760.1 | elongation factor G, putative | LC | chr6:4100... 58 3e-09
Medtr2g029125.6 | elongation factor Tu GTP-binding domain protei... 56 1e-08
Medtr2g029125.4 | elongation factor Tu GTP-binding domain protei... 56 1e-08
Medtr2g066880.1 | elongation factor Tu domain protein | LC | chr... 54 6e-08
Medtr2g029120.3 | elongation factor Tu domain protein | LC | chr... 54 6e-08
Medtr2g069310.1 | translation elongation factor EF-2 subunit | H... 54 6e-08
Medtr2g069050.1 | translation elongation factor EF-2 subunit | H... 54 6e-08
Medtr2g029120.4 | elongation factor Tu domain protein | LC | chr... 54 6e-08
Medtr2g029120.1 | elongation factor Tu domain protein | LC | chr... 54 8e-08
Medtr2g028440.1 | elongation factor Tu GTP-binding domain protei... 53 1e-07
Medtr1g048000.1 | translation elongation factor EF-2 subunit | H... 53 1e-07
Medtr2g028380.1 | elongation factor Tu GTP-binding domain protei... 51 4e-07
Medtr2g028330.1 | transmembrane protein, putative | LC | chr2:10... 49 2e-06
Medtr2g028360.1 | elongation factor Tu GTP-binding domain protei... 49 2e-06
Medtr2g028350.1 | elongation factor Tu GTP-binding domain protei... 48 4e-06
Medtr4g119340.1 | elongation factor Tu family protein | HC | chr... 48 5e-06
Medtr2g028400.1 | elongation factor Tu GTP-binding domain protei... 47 9e-06
>Medtr7g044770.1 | translation elongation factor EF protein | HC |
chr7:15051988-15035581 | 20130731
Length = 751
Score = 314 bits (804), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 148/155 (95%), Positives = 153/155 (98%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EME+I EAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSM+VPEPVMSLAVQPVSKD
Sbjct: 411 MHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKD 470
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA+VGKP
Sbjct: 471 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKP 530
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 531 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 565
>Medtr7g044770.4 | translation elongation factor EF protein | HC |
chr7:15049200-15035581 | 20130731
Length = 574
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/155 (95%), Positives = 153/155 (98%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EME+I EAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSM+VPEPVMSLAVQPVSKD
Sbjct: 234 MHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKD 293
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA+VGKP
Sbjct: 294 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKP 353
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 354 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 388
>Medtr7g044770.5 | translation elongation factor EF protein | HC |
chr7:15049200-15035581 | 20130731
Length = 574
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/155 (95%), Positives = 153/155 (98%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EME+I EAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSM+VPEPVMSLAVQPVSKD
Sbjct: 234 MHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKD 293
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA+VGKP
Sbjct: 294 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKP 353
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 354 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 388
>Medtr7g044770.2 | translation elongation factor EF protein | HC |
chr7:15049200-15035581 | 20130731
Length = 574
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/155 (95%), Positives = 153/155 (98%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EME+I EAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSM+VPEPVMSLAVQPVSKD
Sbjct: 234 MHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKD 293
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA+VGKP
Sbjct: 294 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKP 353
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 354 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 388
>Medtr7g044770.3 | translation elongation factor EF protein | HC |
chr7:15049200-15035581 | 20130731
Length = 574
Score = 313 bits (802), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/155 (95%), Positives = 153/155 (98%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EME+I EAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSM+VPEPVMSLAVQPVSKD
Sbjct: 234 MHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKD 293
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA+VGKP
Sbjct: 294 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKP 353
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 354 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 388
>Medtr2g020660.1 | translation elongation factor EF protein | HC |
chr2:6914024-6916616 | 20130731
Length = 727
Score = 302 bits (773), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/155 (91%), Positives = 149/155 (96%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
MHS+EM DI+EAHAGQIVAVFGVDCAS DTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD
Sbjct: 405 MHSNEMNDIEEAHAGQIVAVFGVDCASSDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 464
Query: 61 SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
SGG+FSKALNRFQREDPTFRV LDPESGQTIISGMGELHLDIYV+RI+ EY VDA+VGKP
Sbjct: 465 SGGKFSKALNRFQREDPTFRVSLDPESGQTIISGMGELHLDIYVKRIKMEYGVDATVGKP 524
Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
RVNFRETVTQRADFDYLHKKQSGGQGQYGRV GY+
Sbjct: 525 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYI 559
>Medtr4g101750.1 | translation elongation factor EF protein | HC |
chr4:42090226-42085957 | 20130731
Length = 779
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
MH++ ED++ A G IVA+ G+ D +G+T D + M+ P+PV+ +A++P +K
Sbjct: 441 MHANSREDVKVALTGDIVALAGLKDTITGETLCDPESPVVLERMDFPDPVIKIAIEPKTK 500
Query: 60 DSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGK 119
+ + L + +EDP+F D E QT+I GMGELHL+I V+R++REYKV+A+VG
Sbjct: 501 ADIDKMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREYKVEANVGA 560
Query: 120 PRVNFRETVTQRADFDYLHKKQSGGQGQYGRVT 152
P+VN+RE++++ + Y+HKKQSGGQGQ+ +T
Sbjct: 561 PQVNYRESISKIHEARYVHKKQSGGQGQFADIT 593
>Medtr4g101750.2 | translation elongation factor EF protein | HC |
chr4:42090226-42085957 | 20130731
Length = 742
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
MH++ ED++ A G IVA+ G+ D +G+T D + M+ P+PV+ +A++P +K
Sbjct: 441 MHANSREDVKVALTGDIVALAGLKDTITGETLCDPESPVVLERMDFPDPVIKIAIEPKTK 500
Query: 60 DSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGK 119
+ + L + +EDP+F D E QT+I GMGELHL+I V+R++REYKV+A+VG
Sbjct: 501 ADIDKMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREYKVEANVGA 560
Query: 120 PRVNFRETVTQRADFDYLHKKQSGGQGQYGRVT 152
P+VN+RE++++ + Y+HKKQSGGQGQ+ +T
Sbjct: 561 PQVNYRESISKIHEARYVHKKQSGGQGQFADIT 593
>Medtr8g104240.1 | transmembrane protein, putative | LC |
chr8:43895805-43893623 | 20130731
Length = 125
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 7/70 (10%)
Query: 13 HAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRF 72
++GQIVAVFG +C SGDTF DGSV+Y+MTS+N+ VSKDSGGQFS ALN F
Sbjct: 33 NSGQIVAVFGAECESGDTFADGSVRYSMTSVNI-------LTCSVSKDSGGQFSTALNGF 85
Query: 73 QREDPTFRVG 82
QR+DPTF VG
Sbjct: 86 QRKDPTFPVG 95
>Medtr4g101740.1 | translation elongation factor EF protein | HC |
chr4:42084454-42082881 | 20130731
Length = 246
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 17 IVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQRE 75
IV + G+ D +G+T D + + M+ P V+ +A++P +K + L + E
Sbjct: 3 IVTLVGLKDTIAGETLCDPKGPFVLDQMDFPVHVIKIAIEPKTKADMEKMEAGLIKLAEE 62
Query: 76 DPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKPRVNFRETVTQ 130
DP+FRV D E +TII G GELHL+ V+R++RE+KV+A+VG P+ N+RE++++
Sbjct: 63 DPSFRVSQDKED-RTIIQGTGELHLETIVDRLKREFKVEANVGAPQANYRESISE 116
>Medtr5g083100.1 | elongation factor Tu domain 2 protein | LC |
chr5:35853499-35857057 | 20130731
Length = 448
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
Query: 3 SDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
D ++++ EAHAGQIV V VDCA G+TFTDGSV++ MTS NV + VSKDS
Sbjct: 374 CDGIDEVNEAHAGQIVVVCDVDCAPGETFTDGSVRWAMTSANVLD-------YSVSKDSS 426
Query: 63 GQFSKALNRFQREDPTFRVGL 83
Q S +N QR DPT+ VGL
Sbjct: 427 EQSSNVVNGLQRNDPTYPVGL 447
>Medtr8g105040.1 | translation elongation factor EF protein | LC |
chr8:44302091-44301429 | 20130731
Length = 178
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
Query: 2 HSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDS 61
H D +E + EAHAG+IV V + SGDTFTDGSV+YTM+S +VP VSKDS
Sbjct: 117 HDDVIEFVDEAHAGEIVIVLAIVLKSGDTFTDGSVRYTMSSADVP-------TYSVSKDS 169
Query: 62 GGQFSKALN 70
G +FS +N
Sbjct: 170 GEKFSNGVN 178
>Medtr3g014380.1 | translation elongation factor G, putative | LC |
chr3:4085640-4084177 | 20130731
Length = 487
Score = 66.2 bits (160), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
Query: 2 HSDEMEDIQEAHAGQIVAVFGVDC--ASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
H + ++ + EAHAG++V V D SGDTFTDGS++YTMTS +VP VSK
Sbjct: 418 HDNTIKAVDEAHAGELVIVLKFDAILKSGDTFTDGSIRYTMTSADVP-------AYSVSK 470
Query: 60 DSGGQFSKALNRF 72
DSG +FS +N F
Sbjct: 471 DSGEKFSNGVNGF 483
>Medtr8g105060.1 | elongation factor G | LC | chr8:44307976-44306573
| 20130731
Length = 453
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 2 HSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVP 46
H DE+E + EAHAG+IV +F SGDTFTDGSV+YTMTS +VP
Sbjct: 404 HDDEIEYVDEAHAGEIVMLFDALLKSGDTFTDGSVRYTMTSADVP 448
>Medtr4g051702.1 | elongation factor G | LC | chr4:18703124-18701687
| 20130731
Length = 467
Score = 64.3 bits (155), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 8/68 (11%)
Query: 4 DEMEDIQEAHAGQIVAVFGVDCASGDTFT-DGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
+++E++ EAHAG+IV VF SGDTFT +GSV+YTMTS +VP VSKDSG
Sbjct: 407 NKIEEVDEAHAGEIVFVFDAHLESGDTFTANGSVRYTMTSADVP-------AYSVSKDSG 459
Query: 63 GQFSKALN 70
FS +N
Sbjct: 460 HTFSNGVN 467
>Medtr8g104250.1 | elongation factor | HC | chr8:43897420-43896119 |
20130731
Length = 412
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 2 HSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMS 51
H D++E++ EAHAG+I+ V SGDTFTDGSV+YTMTS +VP+ +S
Sbjct: 363 HDDKIEEVDEAHAGEIIIVLDAILKSGDTFTDGSVRYTMTSADVPDYSIS 412
>Medtr6g023380.1 | translation elongation factor EF protein | LC |
chr6:8158281-8159340 | 20130731
Length = 320
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 8/68 (11%)
Query: 4 DEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTS-MNVPEPVMSLAVQPVSKDSG 62
D+++++ EAHAG+IV VF SGDTFTDGSV+Y MTS +VP VSKD G
Sbjct: 260 DKIKEVDEAHAGEIVFVFDAHLESGDTFTDGSVRYIMTSAADVP-------AYSVSKDCG 312
Query: 63 GQFSKALN 70
+FS +N
Sbjct: 313 EKFSNGVN 320
>Medtr2g029210.1 | elongation factor Tu domain protein | LC |
chr2:10892672-10895342 | 20130731
Length = 199
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 3 SDEMEDIQEAHAGQIVAVF-----GVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAV--- 54
+DE+E I EAHAG+IV ++ V+CA G TFTDG +YT+TSMNV E V ++
Sbjct: 86 NDELEVILEAHAGEIVTLYECCVNDVECAPGYTFTDGFARYTITSMNVSESVSKDSIDVS 145
Query: 55 QPVSKDSGGQFSKALNRFQREDPTF 79
+ VS+DS Q S E+P
Sbjct: 146 ESVSRDSRVQVSDEYESRLFENPNI 170
>Medtr8g105070.1 | elongation factor Tu domain protein | LC |
chr8:44312627-44310681 | 20130731
Length = 128
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 2 HSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNV 45
H +++++ EAHAG+IV VFG SGDTFTDGSV+Y MTS +V
Sbjct: 42 HYGKIKEVDEAHAGEIVFVFGAILRSGDTFTDGSVRYIMTSADV 85
>Medtr6g004760.1 | elongation factor G, putative | LC |
chr6:410091-409729 | 20130731
Length = 69
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 6 MEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMN 44
+ED+ AHAGQIVA+F VD A GDT TDGSV++ MTS+N
Sbjct: 23 IEDVDVAHAGQIVALFDVDIAPGDTLTDGSVRWAMTSVN 61
>Medtr2g029125.6 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10865158-10854566 | 20130731
Length = 493
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 5 EMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNV 45
E +++QEAHAG+IV V V+ ASGDTFTDG V+YT TS++V
Sbjct: 451 ESQEVQEAHAGEIVMVHDVNNASGDTFTDGLVRYTRTSIDV 491
>Medtr2g029125.4 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10865158-10853642 | 20130731
Length = 487
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 5 EMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNV 45
E +++QEAHAG+IV V V+ ASGDTFTDG V+YT TS++V
Sbjct: 445 ESQEVQEAHAGEIVMVHDVNNASGDTFTDGLVRYTRTSIDV 485
>Medtr2g066880.1 | elongation factor Tu domain protein | LC |
chr2:27965180-27963334 | 20130731
Length = 158
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 25/93 (26%)
Query: 3 SDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
+D + I+EA+AG+IVAVF A G FTDG V YTMTS++V E VS+DS
Sbjct: 43 NDVFKVIEEANAGEIVAVFN---APG--FTDGLVSYTMTSIDVSE--------SVSRDSD 89
Query: 63 GQFSKA------------LNRFQREDPTFRVGL 83
Q S LN FQ DPT RVGL
Sbjct: 90 VQVSSFSFFVFSSCVLLLLNAFQGPDPTLRVGL 122
>Medtr2g029120.3 | elongation factor Tu domain protein | LC |
chr2:10851722-10845200 | 20130731
Length = 453
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 22/91 (24%)
Query: 3 SDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
+D ++ IQEAHAG+IVAVF V+ GDTFTDG V+YT ++ S D+
Sbjct: 375 NDCLDVIQEAHAGEIVAVFNVNYVPGDTFTDGLVRYTRST---------------SVDA- 418
Query: 63 GQFSKALNRFQREDPTF-RVGLDPESGQTII 92
SK LN FQ +D T R GL E G+ ++
Sbjct: 419 ---SKYLNGFQGKDSTTSRDGL--EMGEVVV 444
>Medtr2g069310.1 | translation elongation factor EF-2 subunit | HC |
chr2:28791281-28795829 | 20130731
Length = 843
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
Query: 7 EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
E +++ G VA+ G+D T T+ ++K++++ PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494
Query: 56 PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
+ + L R + DP ++ ESG+ I++G GELHL+I ++ ++ ++ A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553
Query: 116 SVGK--PRVNFRETVTQRA 132
+ K P V+FRETV +R+
Sbjct: 554 EIIKSDPVVSFRETVLERS 572
>Medtr2g069050.1 | translation elongation factor EF-2 subunit | HC |
chr2:28684491-28689296 | 20130731
Length = 843
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
Query: 7 EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
E +++ G VA+ G+D T T+ ++K++++ PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494
Query: 56 PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
+ + L R + DP ++ ESG+ I++G GELHL+I ++ ++ ++ A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553
Query: 116 SVGK--PRVNFRETVTQRA 132
+ K P V+FRETV +R+
Sbjct: 554 EIIKSDPVVSFRETVLERS 572
>Medtr2g029120.4 | elongation factor Tu domain protein | LC |
chr2:10851716-10844923 | 20130731
Length = 492
Score = 53.9 bits (128), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 3 SDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
+D ++ IQEAHAG+IVAVF V+ GDTFTDG V+YT ++ S D+
Sbjct: 401 NDCLDVIQEAHAGEIVAVFNVNYVPGDTFTDGLVRYTRST---------------SVDA- 444
Query: 63 GQFSKALNRFQREDPT 78
SK LN FQ +D T
Sbjct: 445 ---SKYLNGFQGKDST 457
>Medtr2g029120.1 | elongation factor Tu domain protein | LC |
chr2:10851735-10844923 | 20130731
Length = 466
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 3 SDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 62
+D ++ IQEAHAG+IVAVF V+ GDTFTDG V+YT ++ S D+
Sbjct: 375 NDCLDVIQEAHAGEIVAVFNVNYVPGDTFTDGLVRYTRST---------------SVDA- 418
Query: 63 GQFSKALNRFQREDPT 78
SK LN FQ +D T
Sbjct: 419 ---SKYLNGFQGKDST 431
>Medtr2g028440.1 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10547732-10538354 | 20130731
Length = 578
Score = 53.1 bits (126), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 7 EDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQ--PVSKD 60
E QEAHAG+IVA+ V+ A GD+FT+G V YT S++V E V + +VQ VSKD
Sbjct: 518 EAFQEAHAGEIVALHDVNNAPGDSFTEGLVGYTKASIDVSELVSTDSVQVSKVSKD 573
>Medtr1g048000.1 | translation elongation factor EF-2 subunit | HC |
chr1:18163348-18158836 | 20130731
Length = 843
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 20/139 (14%)
Query: 7 EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
E +++ G VA+ G+D T T+ ++K++++ PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494
Query: 56 PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
+ + L R + DP ++ ESG+ I++G GELHL+I ++ ++ ++ A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553
Query: 116 SVGK--PRVNFRETVTQRA 132
+ K P V+FRETV R+
Sbjct: 554 EIIKSDPVVSFRETVLDRS 572
>Medtr2g028380.1 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10509430-10500786 | 20130731
Length = 478
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 30/43 (69%)
Query: 7 EDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPV 49
E IQ AHAG+IVAV V A GDTFTDG V+YT S +V E V
Sbjct: 428 EAIQVAHAGEIVAVHDVRSAPGDTFTDGLVRYTKASTDVSELV 470
>Medtr2g028330.1 | transmembrane protein, putative | LC |
chr2:10460987-10457238 | 20130731
Length = 199
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 7 EDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNV 45
E QEAHAG+I+AV V A GDTFTDG V+YT S++V
Sbjct: 160 EAFQEAHAGEIIAVHDVFNAPGDTFTDGLVRYTKASIDV 198
>Medtr2g028360.1 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10494432-10482310 | 20130731
Length = 629
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTS 42
M DE+ IQEAHAG+IVA+ V A GDTFTDG V+YT S
Sbjct: 534 MTCDEV--IQEAHAGEIVAIHDVINAPGDTFTDGLVRYTEAS 573
>Medtr2g028350.1 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10476878-10466931 | 20130731
Length = 515
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
Query: 7 EDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQ 64
E IQ A AG+IVAV A GDTFTDG V+YT +S++V E +S+DSG Q
Sbjct: 444 EAIQVARAGEIVAVHDPLSAPGDTFTDGLVRYTKSSVDVSE--------LISRDSGVQ 493
>Medtr4g119340.1 | elongation factor Tu family protein | HC |
chr4:49411895-49415258 | 20130731
Length = 1026
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 1 MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVK--YTMTSMNVP-EPVMSLAVQPV 57
M ++ ++ A AG +VA+ G+ + T S + + +SM P++ +A++P
Sbjct: 485 MMGQGLKVVKSAKAGDVVAIRGLGQYILKSATLSSTRNCWPFSSMAFQVAPILRVAIEPS 544
Query: 58 SKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREY-KVDAS 116
G K L R DP V + G+ +++ GE+HL+ ++ ++ + KV
Sbjct: 545 DPADMGALLKGLRLLNRADPFVEVTVSAR-GEHVLAAAGEVHLERCIKDLKDRFAKVSLE 603
Query: 117 VGKPRVNFRETV 128
V P V+++ET+
Sbjct: 604 VSPPLVSYKETI 615
>Medtr2g028400.1 | elongation factor Tu GTP-binding domain protein |
LC | chr2:10520428-10512134 | 20130731
Length = 497
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
Query: 12 AHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSGGQFSK 67
AHAG+IVAV V A+GDTFTDG V+Y S++V E VS+ SG Q SK
Sbjct: 449 AHAGEIVAVHDVINAAGDTFTDGLVRYRKASVDVSE--------LVSRVSGVQVSK 496