Miyakogusa Predicted Gene

Lj0g3v0341919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0341919.1 Non Chatacterized Hit- tr|I1J6F0|I1J6F0_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,96.13,0,EFG_IV,Translation elongation factor EFG/EF2, domain IV;
EF-G C-terminal domain-like,Elongation fact,CUFF.23591.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G45332.1 | Symbols:  | Translation elongation factor EFG/EF2 ...   312   5e-86
AT2G45030.1 | Symbols:  | Translation elongation factor EFG/EF2 ...   312   7e-86
AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | Translation...   143   4e-35
AT1G56070.1 | Symbols: LOS1 | Ribosomal protein S5/Elongation fa...    54   6e-08
AT3G22980.1 | Symbols:  | Ribosomal protein S5/Elongation factor...    49   1e-06

>AT1G45332.1 | Symbols:  | Translation elongation factor EFG/EF2
           protein | chr1:17172507-17176683 REVERSE LENGTH=754
          Length = 754

 Score =  312 bits (800), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 145/155 (93%), Positives = 154/155 (99%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
           MHS++MEDIQEAHAGQIVAVFG++CASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD
Sbjct: 414 MHSNDMEDIQEAHAGQIVAVFGIECASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 473

Query: 61  SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
           SGGQFSKALNRFQ+EDPTFRVGLDPESGQTIISGMGELHLDIYVER+RREYKVDA+VGKP
Sbjct: 474 SGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYKVDATVGKP 533

Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
           RVNFRET+TQRA+FDYLHKKQSGG GQYGRVTGYV
Sbjct: 534 RVNFRETITQRAEFDYLHKKQSGGAGQYGRVTGYV 568


>AT2G45030.1 | Symbols:  | Translation elongation factor EFG/EF2
           protein | chr2:18572411-18576756 FORWARD LENGTH=754
          Length = 754

 Score =  312 bits (799), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 145/155 (93%), Positives = 154/155 (99%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 60
           MHS++MEDIQEAHAGQIVAVFG++CASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD
Sbjct: 414 MHSNDMEDIQEAHAGQIVAVFGIECASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKD 473

Query: 61  SGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGKP 120
           SGGQFSKALNRFQ+EDPTFRVGLDPESGQTIISGMGELHLDIYVER+RREYKVDA+VGKP
Sbjct: 474 SGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYKVDATVGKP 533

Query: 121 RVNFRETVTQRADFDYLHKKQSGGQGQYGRVTGYV 155
           RVNFRET+TQRA+FDYLHKKQSGG GQYGRVTGYV
Sbjct: 534 RVNFRETITQRAEFDYLHKKQSGGAGQYGRVTGYV 568


>AT1G62750.1 | Symbols: ATSCO1, ATSCO1/CPEF-G, SCO1 | Translation
           elongation factor EFG/EF2 protein |
           chr1:23233622-23236321 REVERSE LENGTH=783
          Length = 783

 Score =  143 bits (361), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 65/153 (42%), Positives = 105/153 (68%), Gaps = 1/153 (0%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGV-DCASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSK 59
           MH++  ED++ A  G I+A+ G+ D  +G+T +D      +  M+ P+PV+ +A++P +K
Sbjct: 445 MHANSREDVKVALTGDIIALAGLKDTITGETLSDPENPVVLERMDFPDPVIKVAIEPKTK 504

Query: 60  DSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDASVGK 119
               + +  L +  +EDP+F    D E  QT+I GMGELHL+I V+R++RE+KV+A+VG 
Sbjct: 505 ADIDKMATGLIKLAQEDPSFHFSRDEEMNQTVIEGMGELHLEIIVDRLKREFKVEANVGA 564

Query: 120 PRVNFRETVTQRADFDYLHKKQSGGQGQYGRVT 152
           P+VN+RE++++ A+  Y HKKQSGGQGQ+  +T
Sbjct: 565 PQVNYRESISKIAEVKYTHKKQSGGQGQFADIT 597


>AT1G56070.1 | Symbols: LOS1 | Ribosomal protein S5/Elongation
           factor G/III/V family protein | chr1:20968245-20971077
           REVERSE LENGTH=843
          Length = 843

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 20/139 (14%)

Query: 7   EDIQEAHAGQIVAVFGVD--CASGDTFTDG---------SVKYTMTSMNVPEPVMSLAVQ 55
           E +++   G  VA+ G+D       T T+          ++K++++      PV+ +AVQ
Sbjct: 441 ETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVS------PVVRVAVQ 494

Query: 56  PVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDA 115
                   +  + L R  + DP     ++ ESG+ I++G GELHL+I ++ ++ ++   A
Sbjct: 495 CKVASDLPKLVEGLKRLAKSDPMVVCTME-ESGEHIVAGAGELHLEICLKDLQDDFMGGA 553

Query: 116 SVGK--PRVNFRETVTQRA 132
            + K  P V+FRETV  R+
Sbjct: 554 EIIKSDPVVSFRETVCDRS 572


>AT3G22980.1 | Symbols:  | Ribosomal protein S5/Elongation factor
           G/III/V family protein | chr3:8160269-8163316 REVERSE
           LENGTH=1015
          Length = 1015

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 1   MHSDEMEDIQEAHAGQIVAVFGVDCASGDTFTDGSVK--YTMTSMNVP-EPVMSLAVQPV 57
           M    +  + E  AG +VA+ G+      + T  S +  + + SM     P + +A++P 
Sbjct: 487 MMGQGLTPVTEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTLRVAIEPS 546

Query: 58  SKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREY-KVDAS 116
                    K L    R DP   + +    G+ +++  GE+HL+  V+ ++  + KV+  
Sbjct: 547 DPADMSALMKGLRLLNRADPFVEITVSAR-GEHVLAAAGEVHLERCVKDLKERFAKVNLE 605

Query: 117 VGKPRVNFRETV 128
           V  P V++RET+
Sbjct: 606 VSPPLVSYRETI 617