Miyakogusa Predicted Gene

Lj0g3v0339659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0339659.1 Non Characterized Hit- tr|A5B5U4|A5B5U4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.69,0.0000000000009,seg,NULL,CUFF.23233.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084425.2 | RING/FYVE/PHD zinc finger protein | HC | chr2:...    74   9e-14
Medtr2g084425.1 | RING/FYVE/PHD zinc finger protein | HC | chr2:...    72   4e-13
Medtr1g068930.3 | PHD zinc finger protein | HC | chr1:29486791-2...    70   2e-12
Medtr1g068930.2 | PHD zinc finger protein | HC | chr1:29486791-2...    70   2e-12
Medtr1g068930.4 | PHD zinc finger protein | HC | chr1:29486791-2...    70   2e-12
Medtr1g068930.1 | PHD zinc finger protein | HC | chr1:29486791-2...    70   2e-12
Medtr7g102610.1 | PHD zinc finger protein | HC | chr7:41588910-4...    67   1e-11
Medtr1g062330.1 | RING/FYVE/PHD zinc finger protein | HC | chr1:...    58   7e-09
Medtr4g050090.1 | PHD zinc finger protein, putative | LC | chr4:...    55   4e-08
Medtr4g056990.1 | RING/FYVE/PHD zinc finger protein | LC | chr4:...    52   3e-07

>Medtr2g084425.2 | RING/FYVE/PHD zinc finger protein | HC |
           chr2:35580107-35572476 | 20130731
          Length = 950

 Score = 73.9 bits (180), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 17/113 (15%)

Query: 100 QITFQLLNWSLGDAAAPGS-----------LKEANKLFKQRFEPIY-GSHGENLVENMIL 147
           +I +++LNW L    A G            L +A  +F +RF+PI   S G + +  M+ 
Sbjct: 841 EIKWRVLNWKL---VASGENKQLSDEYRQVLSKAVAIFHERFDPIVDSSSGRDFIPTMLF 897

Query: 148 GTS--GEEFKDMLCAVLLLDGTVASTALFRLIGPKVAEMPLAASSFDFEGQVL 198
           G +  G++F  M CAVL ++  V S  +FR+ GP+VAE+PL A+  +++GQV+
Sbjct: 898 GKNIRGQDFSGMYCAVLTVNQVVVSAGVFRVFGPEVAELPLVATVSEYQGQVI 950


>Medtr2g084425.1 | RING/FYVE/PHD zinc finger protein | HC |
           chr2:35580107-35572472 | 20130731
          Length = 1029

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 17/111 (15%)

Query: 100 QITFQLLNWSLGDAAAPGS-----------LKEANKLFKQRFEPIY-GSHGENLVENMIL 147
           +I +++LNW L    A G            L +A  +F +RF+PI   S G + +  M+ 
Sbjct: 841 EIKWRVLNWKL---VASGENKQLSDEYRQVLSKAVAIFHERFDPIVDSSSGRDFIPTMLF 897

Query: 148 GTS--GEEFKDMLCAVLLLDGTVASTALFRLIGPKVAEMPLAASSFDFEGQ 196
           G +  G++F  M CAVL ++  V S  +FR+ GP+VAE+PL A+  +++GQ
Sbjct: 898 GKNIRGQDFSGMYCAVLTVNQVVVSAGVFRVFGPEVAELPLVATVSEYQGQ 948


>Medtr1g068930.3 | PHD zinc finger protein | HC |
           chr1:29486791-29477841 | 20130731
          Length = 860

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 64  FPSLLKSVLTGRTEIPEYYKRLIEEKRLGRGL---KGPSQITFQLLNWSLGDAAAPGSLK 120
           + +L  SV  G   IP     LI  K   RGL      + I +++L+     A     L 
Sbjct: 649 YVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLS 708

Query: 121 EANKLFKQRFEPIYGSHGENLVENMILG--TSGEEFKDMLCAVLLLDGTVASTALFRLIG 178
            A  +F++ F+PI    G +L+  M+ G   SG+EF  M C VL+++  V S  L R+ G
Sbjct: 709 RAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFG 768

Query: 179 PKVAEMPLAASSFDFEGQ 196
             +AE+PL A+S + +G+
Sbjct: 769 RNIAELPLVATSREHQGK 786


>Medtr1g068930.2 | PHD zinc finger protein | HC |
           chr1:29486791-29477841 | 20130731
          Length = 897

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 64  FPSLLKSVLTGRTEIPEYYKRLIEEKRLGRGL---KGPSQITFQLLNWSLGDAAAPGSLK 120
           + +L  SV  G   IP     LI  K   RGL      + I +++L+     A     L 
Sbjct: 686 YVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLS 745

Query: 121 EANKLFKQRFEPIYGSHGENLVENMILG--TSGEEFKDMLCAVLLLDGTVASTALFRLIG 178
            A  +F++ F+PI    G +L+  M+ G   SG+EF  M C VL+++  V S  L R+ G
Sbjct: 746 RAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFG 805

Query: 179 PKVAEMPLAASSFDFEGQ 196
             +AE+PL A+S + +G+
Sbjct: 806 RNIAELPLVATSREHQGK 823


>Medtr1g068930.4 | PHD zinc finger protein | HC |
           chr1:29486791-29477841 | 20130731
          Length = 860

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 64  FPSLLKSVLTGRTEIPEYYKRLIEEKRLGRGL---KGPSQITFQLLNWSLGDAAAPGSLK 120
           + +L  SV  G   IP     LI  K   RGL      + I +++L+     A     L 
Sbjct: 649 YVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLS 708

Query: 121 EANKLFKQRFEPIYGSHGENLVENMILG--TSGEEFKDMLCAVLLLDGTVASTALFRLIG 178
            A  +F++ F+PI    G +L+  M+ G   SG+EF  M C VL+++  V S  L R+ G
Sbjct: 709 RAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFG 768

Query: 179 PKVAEMPLAASSFDFEGQ 196
             +AE+PL A+S + +G+
Sbjct: 769 RNIAELPLVATSREHQGK 786


>Medtr1g068930.1 | PHD zinc finger protein | HC |
           chr1:29486791-29477841 | 20130731
          Length = 897

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 64  FPSLLKSVLTGRTEIPEYYKRLIEEKRLGRGL---KGPSQITFQLLNWSLGDAAAPGSLK 120
           + +L  SV  G   IP     LI  K   RGL      + I +++L+     A     L 
Sbjct: 686 YVALQNSVSAGADTIPSSLSELIIRKHEDRGLCTYGDMNDIQWRILSGKSRYAEHLPLLS 745

Query: 121 EANKLFKQRFEPIYGSHGENLVENMILG--TSGEEFKDMLCAVLLLDGTVASTALFRLIG 178
            A  +F++ F+PI    G +L+  M+ G   SG+EF  M C VL+++  V S  L R+ G
Sbjct: 746 RAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSIVVSAGLLRIFG 805

Query: 179 PKVAEMPLAASSFDFEGQ 196
             +AE+PL A+S + +G+
Sbjct: 806 RNIAELPLVATSREHQGK 823


>Medtr7g102610.1 | PHD zinc finger protein | HC |
           chr7:41588910-41576648 | 20130731
          Length = 957

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 63  RFPSLLKSVLT-GRTEIPEYYKRLIEEKRLGRGLKGPSQITFQLLNWSL--GDAAAPGS- 118
           R  S L++VL  G   +P+    +I++K+  +GL   + I  +   W L  G  A+P + 
Sbjct: 737 RIHSTLENVLVRGAERLPKSLLAVIKKKQEEKGLDPINDINVR---WRLLSGKKASPETR 793

Query: 119 --LKEANKLFKQRFEPIYGS-HGENLVENMILGTS--GEEFKDMLCAVLLLDGTVASTAL 173
             L EA  +F + F+PI  +  G +L+  M+ G S  G+EF  M CA+L+++ +V S  +
Sbjct: 794 PLLLEAVSIFHECFDPIVDAVSGRDLIRAMVYGKSVRGQEFGGMYCALLIVNSSVVSAGM 853

Query: 174 FRLIGPKVAEMPLAASSFDFEGQ 196
            R+ G  +AE+PL A+S    G+
Sbjct: 854 LRIFGTDIAELPLVATSNSQHGK 876


>Medtr1g062330.1 | RING/FYVE/PHD zinc finger protein | HC |
           chr1:27195814-27206523 | 20130731
          Length = 812

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 63  RFPSLLKSVLTGRTE-IPEYYKRLIEEKRLGRGLKGPSQITFQLLNWSL--GDAAAPGS- 118
           R  S+L+++L    E +PE    +I++K+  R L+  ++I    + W L  G  A+P + 
Sbjct: 592 RIHSILENLLVREAEKLPESLLDVIKKKQEDRCLEPLNEID---IRWRLVNGKVASPETR 648

Query: 119 --LKEANKLFKQRFEPIYGSHGE-NLVENMILGTS--GEEFKDMLCAVLLLDGTVASTAL 173
             L EA  +F + F+PI  +  E +L+ +M+ G +   ++F  + CA+L+++ +V S  +
Sbjct: 649 PLLLEALSIFNECFDPIVDAATERDLIPSMVYGRNLQTQDFGGVYCALLMVNSSVVSAGM 708

Query: 174 FRLIGPKVAEMPLAASSFDFEGQ 196
            R+ G  +AE+PL A+     G+
Sbjct: 709 LRIFGTDIAELPLIATRHKNRGK 731


>Medtr4g050090.1 | PHD zinc finger protein, putative | LC |
           chr4:17703821-17708915 | 20130731
          Length = 784

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 9/138 (6%)

Query: 68  LKSVLT-GRTEIPEYYKRLIEEKRLGRGLKGPS--QITFQLLNWSLGDAAAPGS--LKEA 122
           LKS +  G + + +Y   LI++K+  +G +      I +++ N  L D+    S  L   
Sbjct: 433 LKSFMARGDSLLSDYLLNLIKKKQEKKGFETELGLDIKWKIFNTKLIDSGIITSSFLFNV 492

Query: 123 NKLFKQRFEPIYGSHGE-NLVENMILGTSGEE---FKDMLCAVLLLDGTVASTALFRLIG 178
             +F ++F+ I  +  + +L++ M+ GT  ++   F  M CAVL+++  V S  +FR+ G
Sbjct: 493 AAIFHEQFDSIVDTGTDIDLIQAMLRGTEIDDKYYFGGMYCAVLIVNQVVVSAGIFRVFG 552

Query: 179 PKVAEMPLAASSFDFEGQ 196
             VAE+PL A+  +++ Q
Sbjct: 553 KDVAELPLVATKAEYKEQ 570


>Medtr4g056990.1 | RING/FYVE/PHD zinc finger protein | LC |
           chr4:20834265-20838224 | 20130731
          Length = 632

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 100 QITFQLLNWSLGDAAAPGS--LKEANKLFKQRFEPIYGSHGE-NLVENMILGTSGE---E 153
            I ++LLN  L +     S  + +AN +F +RF+ I     + +L+  M+ G   E    
Sbjct: 447 DIKWRLLNTKLNNPKHNISPLISKANAIFHERFKSIKDPKTKIDLIRAMLYGMEIEGQYS 506

Query: 154 FKDMLCAVLLLDGTVASTALFRLIGPKVAEMPLAASSFDFE 194
           F+ M CAVL     +A   +FR++G +VAE+PL A++  ++
Sbjct: 507 FEGMYCAVLYFKKVIACAGIFRVLGQEVAELPLVATTTKYQ 547