Miyakogusa Predicted Gene

Lj0g3v0336659.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0336659.1 Non Characterized Hit- tr|G7ISV8|G7ISV8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,57.63,0.00000000004, ,CUFF.23013.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090907.1 | F-box plant-like protein | LC | chr1:40995417-...    79   7e-16
Medtr2g048140.1 | F-box/RNI/FBD-like domain protein | LC | chr2:...    72   8e-14
Medtr1g090903.1 | F-box plant-like protein | HC | chr1:40987626-...    67   3e-12
Medtr3g448340.1 | F-box/RNI/FBD-like domain protein | LC | chr3:...    50   3e-07
Medtr5g080150.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    50   4e-07
Medtr3g049530.1 | F-box/FBD/LRR protein | LC | chr3:18462648-184...    47   4e-06

>Medtr1g090907.1 | F-box plant-like protein | LC |
           chr1:40995417-40993738 | 20130731
          Length = 455

 Score = 79.3 bits (194), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 44/59 (74%)

Query: 1   MQLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCKT 59
            QLP  VY LGS LESLKLYSCGF M +L NF +LK++S GWIE+   TL+ LL TC+T
Sbjct: 141 FQLPTQVYQLGSSLESLKLYSCGFDMQNLHNFVALKDLSLGWIEVEIKTLKKLLSTCRT 199


>Medtr2g048140.1 | F-box/RNI/FBD-like domain protein | LC |
           chr2:21179387-21181178 | 20130731
          Length = 456

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 34/59 (57%), Positives = 40/59 (67%)

Query: 1   MQLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCKT 59
            QLP HVY LG  LESLKLYSCGF      NF +LK++S GWIE+   TL+ LL  C+T
Sbjct: 141 FQLPTHVYQLGLSLESLKLYSCGFDAQDFLNFGALKDLSLGWIEVKIKTLKKLLSICRT 199


>Medtr1g090903.1 | F-box plant-like protein | HC |
           chr1:40987626-40985978 | 20130731
          Length = 411

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/58 (67%), Positives = 46/58 (79%)

Query: 2   QLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCKT 59
           QLP HVY LGSLL+SLKLYSC F MP + NF +LK++S GWIE+   TL+TLL TCKT
Sbjct: 140 QLPTHVYQLGSLLKSLKLYSCSFDMPDILNFGALKDVSLGWIEVPMNTLKTLLSTCKT 197


>Medtr3g448340.1 | F-box/RNI/FBD-like domain protein | LC |
           chr3:16154337-16151394 | 20130731
          Length = 462

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 2   QLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCK 58
           +L   VY+    L+SLKL+SC F    L  F +LKE+S GW+E+    + TLL  CK
Sbjct: 138 ELRTKVYE-NKTLKSLKLFSCNFPENELMKFHALKEVSLGWMELKNNAIETLLSNCK 193


>Medtr5g080150.1 | F-box/RNI/FBD-like domain protein | LC |
           chr5:34299037-34296649 | 20130731
          Length = 391

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 1   MQLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCK 58
           + L  +VY+  S L+SLKLYSC FS   + NF SLKEIS G++ +S   +  LL  C+
Sbjct: 142 VDLSSYVYEY-SGLQSLKLYSCDFSASEMVNFHSLKEISLGFMRVSICAIEALLTNCE 198


>Medtr3g049530.1 | F-box/FBD/LRR protein | LC |
           chr3:18462648-18465581 | 20130731
          Length = 418

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 2   QLPQHVYDLGSLLESLKLYSCGFSMPHLSNFRSLKEISFGWIEISEATLRTLLHTCK 58
           +LP  VY   +L ESLKL SC F    L    +LKE+ F W+E+    ++ LL  CK
Sbjct: 87  ELPTEVYKHKTL-ESLKLVSCSFVETKLIKLHALKEVYFAWMELKNEAIKMLLSNCK 142