Miyakogusa Predicted Gene

Lj0g3v0328459.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0328459.1 tr|I1JXB2|I1JXB2_SOYBN Cytosine-specific
methyltransferase OS=Glycine max GN=Gma.13821 PE=3 SV=1,72.47,0,Bromo
adjacent homology domain,Bromo adjacent homology (BAH) domain; DNA
(CYTOSINE-5)-METHYLTRANSFER,CUFF.22357.1
         (2352 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65549 similar to UniRef100_O49022 Cluster: Cytosine-s...   103   5e-21

>gnl|LJGI|TC65549 similar to UniRef100_O49022 Cluster: Cytosine-specific
           methyltransferase; n=1; Pisum sativum|Rep:
           Cytosine-specific methyltransferase - Pisum sativum
           (Garden pea), partial (18%)
          Length = 1054

 Score =  103 bits (52), Expect = 5e-21
 Identities = 139/168 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   gtggtagcaagtatttttctggaactgcatttgcaaaggattttgtcatttctcaaggtg 64
           |||| |||||||  || ||||||||||||| |  ||| |||||||| |||||||| || |
Sbjct: 825 gtggcagcaagttcttctctggaactgcatctctaaaagattttgttatttctcagggcg 884

                                                                       
Query: 65  agtttattcataagcagctgataggattagatgtcacatccaagcaaaatgacaggatgt 124
           |||||||| |||||||||| ||||| |||||  |  ||  ||||  |||||||| |||||
Sbjct: 885 agtttatttataagcagctcataggtttagacatgtcagacaagacaaatgacaagatgt 944

                                                           
Query: 125 ttgcaaatattcctgtgcttgctgctcttagagatgagagtaagaaac 172
           ||||| |||||||||  ||||   ||||||||||||||||||||||||
Sbjct: 945 ttgcagatattcctgctcttgtctctcttagagatgagagtaagaaac 992