Miyakogusa Predicted Gene
- Lj0g3v0324649.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324649.1 Non Chatacterized Hit- tr|Q8GQK6|Q8GQK6_9FLAO
Putative uncharacterized protein OS=Empedobacter
brevi,27.59,2.6,seg,NULL; coiled-coil,NULL,CUFF.22061.1
(516 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74267 similar to UniRef100_A0D0S5 Cluster: Chromosome... 854 0.0
gnl|LJGI|TC63122 720 0.0
>gnl|LJGI|TC74267 similar to UniRef100_A0D0S5 Cluster: Chromosome undetermined
scaffold_33, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_33, whole genome shotgun sequence - Paramecium
tetraurelia, partial (6%)
Length = 1132
Score = 854 bits (431), Expect = 0.0
Identities = 462/471 (98%), Gaps = 1/471 (0%)
Strand = Plus / Plus
Query: 1 atgttttataccatcggattctcgccaaggccggcaggtttccgccgcattgtggaagac 60
||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 385 atgttttataccatcggattctcgccaaggccgccaagtttc-gccgcattgtggaagac 443
Query: 61 atggactggcggaccttcaatccgatgaaaaccaggataatgctatggaatagagccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atggactggcggaccttcaatccgatgaaaaccaggataatgctatggaatagagccacc 503
Query: 121 gtgttaattgttaggatcaaggacttggatgagataacgtatgagggtgctaagtggtta 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 gtgttaattgttaggatcaaggacttggacgagataacgtatgagggtgctaagtggtta 563
Query: 181 gccaaattgagcaatgccagagtagcttccttcgatgagatgatcacaaacttatcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccaaattgagcaatgccagagtagcttccttcgatgagatgatcacaaacttatcccag 623
Query: 241 atgaggaaagaatggtttgttttgaaagatttgaattctttgcttgaggacttaagaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgaggaaagaatggtttgttttgaaagatttgaattctttgcttgaggacttaagaaag 683
Query: 301 ctcaagtgggattgtaacaaagaagaacaagaagaattgaatgaggatttgtgggatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctcaagtgggattgtaacaaagaagaacaagaagaattgaatgaggatttgtgggatgaa 743
Query: 361 ttaaatgaggagttggggaatgtcaggtgggatgaaattcatcaggcgctcatgagcttc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttaaatgaggagttggggaatgtcaggtgggatgaaattcatcaggcgctcatgagctta 803
Query: 421 aggggggcgtgcttgtttgacgcccagcagttagccatgaagaccgccgag 471
|||||| ||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 804 agggggacgtgcttgtttgacgccaagcagttagtcatgaagaccgacgag 854
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 470 agaaagctctattattttcattcactcatcaactcaaatatgtgtga 516
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 agaaagctctattattttcattcactcatcaactcaaatatgtgtga 1012
>gnl|LJGI|TC63122
Length = 1011
Score = 720 bits (363), Expect = 0.0
Identities = 445/471 (94%), Gaps = 1/471 (0%)
Strand = Plus / Plus
Query: 1 atgttttataccatcggattctcgccaaggccggcaggtttccgccgcattgtggaagac 60
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 332 atgttttataccatcggattctcgccaaggccgccaggtttc-gccgcattgtggaagac 390
Query: 61 atggactggcggaccttcaatccgatgaaaaccaggataatgctatggaatagagccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atggactggcggaccttcaatccgatgaaaaccaggataatgctatggaatagagccacc 450
Query: 121 gtgttaattgttaggatcaaggacttggatgagataacgtatgagggtgctaagtggtta 180
|||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||
Sbjct: 451 gtgttaatggttaggatccagaacttggatgatataacgtatgagggtgctaagtggtta 510
Query: 181 gccaaattgagcaatgccagagtagcttccttcgatgagatgatcacaaacttatcccag 240
|| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 511 gcggaattgagcaatgccagagtagcttccttcgatgagatgattgaaaacttatcccag 570
Query: 241 atgaggaaagaatggtttgttttgaaagatttgaattctttgcttgaggacttaagaaag 300
||||||||||||||| | | ||||||||||||| |||||||| ||||||||||| |||
Sbjct: 571 atgaggaaagaatggaatttcttgaaagatttgagttctttgcgcgaggacttaaggaag 630
Query: 301 ctcaagtgggattgtaacaaagaagaacaagaagaattgaatgaggatttgtgggatgaa 360
|||||||||||||||| ||| || ||| |||||||||||||||||||||||||| |||||
Sbjct: 631 ctcaagtgggattgtagcaatgatgaagaagaagaattgaatgaggatttgtggaatgaa 690
Query: 361 ttaaatgaggagttggggaatgtcaggtgggatgaaattcatcaggcgctcatgagcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttaaatgaggagttggggaatgtcaggtgggatgaaattcatcaggcgctcatgagcttc 750
Query: 421 aggggggcgtgcttgtttgacgcccagcagttagccatgaagaccgccgag 471
|||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 751 aggggggcgtgcttgtttgacgccaagcagttagccatgaagaccgacgag 801
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 470 agaaagctctattattttcattcactcatcaactcaaatatgtgtga 516
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 agaaagctctattattttcattcactcatcaactcaaatatgtgtga 959