Miyakogusa Predicted Gene

Lj0g3v0324629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324629.1 tr|G7JNJ4|G7JNJ4_MEDTR Spastin OS=Medicago
truncatula GN=MTR_4g074920 PE=4 SV=1,47.13,8e-17,seg,NULL;
coiled-coil,NULL,CUFF.22408.1
         (467 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g10800.1                                                       273   2e-73
Glyma12g03080.1                                                       260   2e-69

>Glyma11g10800.1 
          Length = 968

 Score =  273 bits (699), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 163/271 (60%), Positives = 190/271 (70%), Gaps = 38/271 (14%)

Query: 234 QKLVPYNVEELPKITSGESETFKS---NDGKFDDKFECQLRKGDRVKYIGPYIPVTADDS 290
           +KLVPYNVEEL K  SGESE  +S   ND K  ++  CQLRKGDRVKYIGP + VT D+ 
Sbjct: 293 RKLVPYNVEELEKEVSGESENSESSKSNDVKSSNESGCQLRKGDRVKYIGPSVKVT-DED 351

Query: 291 RPLAYGQRGEVYEVNGDRVSVILDINED-----ELESV--DNIKPPICWTDVNNIEHDLD 343
           RPL  GQRGEVYEVNGDRV+VILDINED     E+E++  D+ KPPI W  V +IE+DLD
Sbjct: 352 RPLTKGQRGEVYEVNGDRVAVILDINEDRVNKGEVENLNDDHTKPPIYWIHVKDIENDLD 411

Query: 344 APSEDCYIAMEALCEVLHSKQPLIVYFPDG---LHKSVPKSIQSEFFQKVQEKFELLSGP 400
           A S+DCYIA+EALCEVLH +QPLIVYFPD    LHK+VPKS ++EFF KV+E F+ LSGP
Sbjct: 412 AQSQDCYIAVEALCEVLHHRQPLIVYFPDSSQWLHKAVPKSNRNEFFHKVEEMFDRLSGP 471

Query: 401 IVLICGQNKAQSK-----------------GQLLFSMN------KGQKTSKDGEIYKPF- 436
           IV ICGQNK QS                   +L  S+       KG KTS+D EI K F 
Sbjct: 472 IVFICGQNKVQSGSKEKEEFTMILPNFGRVAKLPLSLKRLTEGIKGDKTSEDDEINKLFS 531

Query: 437 NVLSIQPPKDEKLLVIFKKQLEEDRKIVISQ 467
           NVLS+ PPKDE LL  FKKQLEED+KIV S+
Sbjct: 532 NVLSMHPPKDENLLATFKKQLEEDKKIVTSR 562



 Score =  119 bits (297), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 77/118 (65%), Gaps = 5/118 (4%)

Query: 10  GTELYQERLVRALAQHLQVPLLVFDRSILTPYDIDDDLL----SHNDNAESGEEGSLESK 65
           GTELY+ERLVRALAQ LQVPLLV D SIL PYDIDDDL     S  DNAESGEEGSLES+
Sbjct: 188 GTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDYESDEDNAESGEEGSLESE 247

Query: 66  NEDDNDARYCXXXXXXXXXXXXXXXXXXXXXXXKAVLEKIKAAV-QKFVPYNVEELPK 122
           NEDDNDA                          +A L+K+KAAV +K VPYNVEEL K
Sbjct: 248 NEDDNDATNEEEWASSTEAKSDASDNEDAIAAAEAHLKKVKAAVLRKLVPYNVEELEK 305


>Glyma12g03080.1 
          Length = 888

 Score =  260 bits (665), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/295 (54%), Positives = 187/295 (63%), Gaps = 61/295 (20%)

Query: 234 QKLVPYNVEELPKIT------SGESETFKSNDGKFDDKFECQLRKGDRVKYIGPYIPVTA 287
           +KLVPYNV E  K++      S  SE+ KSND K  D+  CQLRKGDRVKYIGP + V  
Sbjct: 169 RKLVPYNVGEFEKVSMYMSGESENSESSKSNDAKSSDQSGCQLRKGDRVKYIGPSVKVRD 228

Query: 288 DD---------------------SRPLAYGQRGEVYEVNGDRVSVILDINED-----ELE 321
           +D                      RPL  GQRGEVYEVNGDRV+VILDINED     E+E
Sbjct: 229 EDRIILGKIPISDGTTNAYTIIHGRPLTKGQRGEVYEVNGDRVAVILDINEDRVNEGEVE 288

Query: 322 SV--DNIKPPICWTDVNNIEHDLDAPSEDCYIAMEALCEVLHSKQPLIVYFPDG---LHK 376
           ++  D+ KPPI W  V +IE+DLDA S DCYIA+EALCEVLH KQPLIVYFPD    LHK
Sbjct: 289 NLNEDHTKPPIYWIHVKDIENDLDAQSHDCYIAVEALCEVLHRKQPLIVYFPDSSQWLHK 348

Query: 377 SVPKSIQSEFFQKVQEKFELLSGPIVLICGQNKAQSK-----------------GQLLFS 419
           +VPKS ++EFF KV+E F+ LSGPIV ICGQNK QS                   +L  S
Sbjct: 349 AVPKSHRNEFFHKVEEMFDRLSGPIVFICGQNKIQSGSKEKEEFTMILPNFGRVAKLPLS 408

Query: 420 MN------KGQKTSKDGEIYKPF-NVLSIQPPKDEKLLVIFKKQLEEDRKIVISQ 467
           +       KG KTS+D EI K F NVLSI PPKDE LL  FKKQLEED+KIV S+
Sbjct: 409 LKHLTEGIKGDKTSEDDEINKLFSNVLSILPPKDENLLATFKKQLEEDKKIVTSR 463



 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/118 (58%), Positives = 75/118 (63%), Gaps = 5/118 (4%)

Query: 10  GTELYQERLVRALAQHLQVPLLVFDRSILTPYDIDDDLL----SHNDNAESGEEGSLESK 65
           GTELY+ERLVRALAQ LQVPLLV D SIL PYDIDDDL     S  DNAESGEEGSLES+
Sbjct: 64  GTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDYESDEDNAESGEEGSLESE 123

Query: 66  NEDDNDARYCXXXXXXXXXXXXXXXXXXXXXXXKAVLEKIKAAV-QKFVPYNVEELPK 122
           NEDDNDA                          +A L+K+KAAV +K VPYNV E  K
Sbjct: 124 NEDDNDATNEEEWASSTETKSDASDNEDAIAAAEAHLKKVKAAVIRKLVPYNVGEFEK 181