Miyakogusa Predicted Gene

Lj0g3v0324629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0324629.1 tr|G7JNJ4|G7JNJ4_MEDTR Spastin OS=Medicago
truncatula GN=MTR_4g074920 PE=4 SV=1,47.13,8e-17,seg,NULL;
coiled-coil,NULL,CUFF.22408.1
         (467 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074920.1 | P-loop nucleoside triphosphate hydrolase super...   248   1e-65

>Medtr4g074920.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:28559006-28543883 |
           20130731
          Length = 947

 Score =  248 bits (632), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/276 (51%), Positives = 179/276 (64%), Gaps = 42/276 (15%)

Query: 234 QKLVPYNVEELPKITSG------ESETFKSNDGKFDDKFECQLRKGDRVKYIGPYIPVTA 287
           +KL+PYNVEEL K+ +G       +E+  S+D    DK   +LRKG RVKYIGP I  + 
Sbjct: 282 KKLIPYNVEELEKMVTGGDTRDDTAESSNSDDATSSDKSGSKLRKGARVKYIGPSIEFSD 341

Query: 288 DDSR--PLAYGQRGEVYEVNGDRVSVILDINEDELESV-------DNIKPPICWTDVNNI 338
            D R   L+ GQ+GE+YEVNGDRV+VI DINE++              KP + W +V +I
Sbjct: 342 ADDREISLSNGQKGEIYEVNGDRVAVIWDINEEKANENEVENLNNSRAKPSVYWINVKDI 401

Query: 339 EHDLDAPSEDCYIAMEALCEVLHSKQPLIVYFPDG---LHKSVPKSIQSEFFQKVQEKFE 395
           E+DLDA S DCYIA+EALCEVL+SK+PLIVYFPD    LHKSVPKS ++EFF KV+E F+
Sbjct: 402 ENDLDAQSHDCYIAVEALCEVLNSKRPLIVYFPDSSQWLHKSVPKSNRNEFFHKVEEMFD 461

Query: 396 LLSGPIVLICGQNKAQ--SKGQLLFSM---------------------NKGQKTSKDGEI 432
            L GP+VLICGQNK    SK +  F+M                      KG KTS++ +I
Sbjct: 462 RLYGPVVLICGQNKVHSGSKEKEKFTMILPNFGRVAKLPLSLKHLTDGFKGGKTSEEDDI 521

Query: 433 YKPF-NVLSIQPPKDEKLLVIFKKQLEEDRKIVISQ 467
            K F NVLS+ PPK+E L  +FKKQLEEDRKIVIS+
Sbjct: 522 NKLFSNVLSVHPPKEENLQTVFKKQLEEDRKIVISR 557



 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 10/144 (6%)

Query: 10  GTELYQERLVRALAQHLQVPLLVFDRSILTPY-DIDDDLLSHNDNAESGEEGSLESKNED 68
           GTELY+ER+VRALAQ LQVPLLV D S+L PY   DD       + ++ E G   S+NED
Sbjct: 181 GTELYRERVVRALAQDLQVPLLVLDSSVLAPYDIDDDQSSDSESDDDNAESGEEGSENED 240

Query: 69  DNDARYCXXXXXXXXXXXXXXXXXXXXXXXKAVLEKIKAAVQKFVPYNVEELPKDISGKE 128
           DNDA                          +A L+K+K AV+K +PYNVEEL K ++G  
Sbjct: 241 DNDASNEEEWSSTEAKSDASDNEDDVVASAEAALKKVKDAVKKLIPYNVEELEKMVTG-- 298

Query: 129 GSLESDSENEERWSSDSDVESDAT 152
                D+ ++   SS+SD   DAT
Sbjct: 299 ----GDTRDDTAESSNSD---DAT 315