Miyakogusa Predicted Gene
- Lj0g3v0324629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324629.1 tr|G7JNJ4|G7JNJ4_MEDTR Spastin OS=Medicago
truncatula GN=MTR_4g074920 PE=4 SV=1,47.13,8e-17,seg,NULL;
coiled-coil,NULL,CUFF.22408.1
(1404 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76312 weakly similar to UniRef100_A7P2W5 Cluster: Chr... 1911 0.0
gnl|LJGI|TC82046 weakly similar to UniRef100_A7P2W5 Cluster: Chr... 577 e-164
gnl|LJGI|BW594400 similar to UniRef100_A7P2W5 Cluster: Chromosom... 460 e-128
gnl|LJGI|GO013029 weakly similar to UniRef100_A7P2W5 Cluster: Ch... 90 4e-17
>gnl|LJGI|TC76312 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 1408
Score = 1911 bits (964), Expect = 0.0
Identities = 985/992 (99%)
Strand = Plus / Plus
Query: 409 aatgaggaaaggtggtcgagcgactccgatgttgagtcagatgctactgaaaatgaagat 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatgaggaaaggtggtcgagcgactccgatgttgagtcagatgctactgaaaatgaagat 60
Query: 469 gcagtggcttctgccgaagcagtcgttgagaaaattaaagcggctgttcagaaacttgtc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagtggcttctgccgaagcagtcgttgagaaaattaaagcggctgttcagaaacttgtc 120
Query: 529 ccatataatgttgaagaattgtcggaggatatatctggggaggaaggttctctggagtca 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatataatgttgaagaattgtcggaggatatatctggggaggaaggttctctggagtca 180
Query: 589 gagaatgaggaagggtggtcgacctattccgatgtcaagtcagatgctagtgaaaatgaa 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagaatgaggaagggtggtcgacctattccgatgtcaagtcagatgctagtgaaaatgaa 240
Query: 649 gatgcagaggcttctgccgaagcagtcgttgagaaaattaaagcggctgttcagaaactt 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgcagaggcttctgccgaagcagtcgttgagaaaattaaagcggctgttcagaaactt 300
Query: 709 gtcccatataatgttgaagaattgccgaagataacctctggagagtctgagactttcaag 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcccatataatgttgaagaattgccgaagataacctctggagagtctgagactttcaag 360
Query: 769 tctaatgatggcaagttcgatgataaatttgaatgtcaactaagaaaaggcgaccgtgtg 828
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctaatgatggctagttcgatgataaatttgaatgtcaactaagaaaaggcgaccgtgtg 420
Query: 829 aagtacattgggccatatattccagttacagctgatgatagcaggcctttagcttatggt 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagtacattgggccatatattccagttacagctgatgatagcaggcctttagcttatggt 480
Query: 889 cagagaggagaggtgtatgaggttaatggagatcgagtctctgtcattttggatattaat 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagagaggagaggtgtatgaggttaatggagatcgagtctctgtcattttggatattaat 540
Query: 949 gaggatgagctggaaagtgttgataatataaagccaccaatttgttggactgatgttaac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaggatgagctggaaagtgttgataatataaagccaccaatttgttggactgatgttaac 600
Query: 1009 aacattgagcatgatcttgatgctccatcagaggattgctacatagcaatggaggcttta 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacattgagcatgatcttgatgctccatcagaggattgctacatagcaatggaggcttta 660
Query: 1069 tgtgaggttttacattccaaacaaccacttattgtctattttccagatggtttgcataaa 1128
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtgaggttttacattccgaacaaccacttattgtctattttccagatggtttgcataaa 720
Query: 1129 tcagttcctaagtcaatccaaagtgagttttttcaaaaggtccaagagaagtttgaactg 1188
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 721 tcagttccgaagtcaatccaaagtgagttttttcacaaggtccaagagaagtttgaactg 780
Query: 1189 ctatctggccccatagtactgatttgtgggcaaaacaaagctcagtcgaaaggacaacta 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 781 ctatctggccccatagtactgatttgtgggcaaaacaaagctcagtcgaaaggacaatta 840
Query: 1249 cttttttctatgaataaagggcaaaagacatcaaaagatggtgaaatttacaagcccttt 1308
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 841 cttttttctatgaataaagggcaaaagacatcaaaagatggtgaattttacaagcccttt 900
Query: 1309 aatgtgttgtctatacagccacctaaggatgagaaactactggtaatattcaagaaacaa 1368
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 901 aatgtgttgtctatacagccacctaaggatgagaaactactggcaatattcaagaaacaa 960
Query: 1369 cttgaggaagataggaaaattgtgatttcaca 1400
||||||||||||||||||||||||||||||||
Sbjct: 961 cttgaggaagataggaaaattgtgatttcaca 992
Score = 389 bits (196), Expect = e-107
Identities = 261/283 (92%), Gaps = 6/283 (2%)
Strand = Plus / Plus
Query: 267 tgaaaatgaagatgcagaggcttctgccaaagcagtccttgagaaaattaaagcggctgt 326
||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 48 tgaaaatgaagatgcagtggcttctgccgaagcagtcgttgagaaaattaaagcggctgt 107
Query: 327 tcagaaatttgtcccatataacgttgaagaattgccgaaggatatatctgggaaggaagg 386
||||||| ||||||||||||| |||||||||||| || |||||||||||||| |||||||
Sbjct: 108 tcagaaacttgtcccatataatgttgaagaattgtcggaggatatatctggggaggaagg 167
Query: 387 ttctctggagtcagactcagagaatgaggaaaggtggtcgagcgactccgatgttgagtc 446
|||||||||||||| ||||||||||| ||||||||| | | |||||||| ||||
Sbjct: 168 ttctctggagtcag------agaatgaggaagggtggtcgacctattccgatgtcaagtc 221
Query: 447 agatgctactgaaaatgaagatgcagtggcttctgccgaagcagtcgttgagaaaattaa 506
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 222 agatgctagtgaaaatgaagatgcagaggcttctgccgaagcagtcgttgagaaaattaa 281
Query: 507 agcggctgttcagaaacttgtcccatataatgttgaagaattg 549
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agcggctgttcagaaacttgtcccatataatgttgaagaattg 324
Score = 167 bits (84), Expect = 2e-40
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 267 tgaaaatgaagatgcagaggcttctgccaaagcagtccttgagaaaattaaagcggctgt 326
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 231 tgaaaatgaagatgcagaggcttctgccgaagcagtcgttgagaaaattaaagcggctgt 290
Query: 327 tcagaaatttgtcccatataacgttgaagaattgccgaag 366
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 291 tcagaaacttgtcccatataatgttgaagaattgccgaag 330
Score = 69.9 bits (35), Expect = 4e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 165 atctggggaggaaggttctctggagtcaaagaatgagga 203
|||||||||||||||||||||||||||| ||||||||||
Sbjct: 153 atctggggaggaaggttctctggagtcagagaatgagga 191
>gnl|LJGI|TC82046 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 558
Score = 577 bits (291), Expect = e-164
Identities = 299/302 (99%)
Strand = Plus / Plus
Query: 1103 tctattttccagatggtttgcataaatcagttcctaagtcaatccaaagtgagttttttc 1162
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tctattttccagatggtttgcataaatcaggtcctaagtcaatccaaagtgagttttttc 60
Query: 1163 aaaaggtccaagagaagtttgaactgctatctggccccatagtactgatttgtgggcaaa 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaggtccaagagaagtttgaactgctatctggccccatagtactgatttgtgggcaaa 120
Query: 1223 acaaagctcagtcgaaaggacaactacttttttctatgaataaagggcaaaagacatcaa 1282
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accaagctcagtcgaaaggacaactacttttttctatgaataaagggcaaaagacatcaa 180
Query: 1283 aagatggtgaaatttacaagccctttaatgtgttgtctatacagccacctaaggatgaga 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagatggtgaaatttacaagccctttaatgtgttgtctatacagccacctaaggatgaga 240
Query: 1343 aactactggtaatattcaagaaacaacttgaggaagataggaaaattgtgatttcacagt 1402
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 241 aactactggtaatattcaagaaacnacttgaggaagataggaaaattgtgatttcacagt 300
Query: 1403 aa 1404
||
Sbjct: 301 aa 302
>gnl|LJGI|BW594400 similar to UniRef100_A7P2W5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 480
Score = 460 bits (232), Expect = e-128
Identities = 379/428 (88%)
Strand = Plus / Plus
Query: 972 taatataaagccaccaatttgttggactgatgttaacaacattgagcatgatcttgatgc 1031
||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||||||
Sbjct: 18 taatagaaagccaccaatttattggattaatgttaacaacattgagcatgatcttgatgc 77
Query: 1032 tccatcagaggattgctacatagcaatggaggctttatgtgaggttttacattccaaaca 1091
|| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 78 tcaatcacaagattgctacatagcaatggaggctttatgtgaggttttgcattccaaaca 137
Query: 1092 accacttattgtctattttccagatggtttgcataaatcagttcctaagtcaatccaaag 1151
||| |||||||||||||||||||| |||| ||||||||||||||| ||||||| | |||
Sbjct: 138 acctcttattgtctattttccagacagtttacataaatcagttcctgagtcaatgcgaag 197
Query: 1152 tgagttttttcaaaaggtccaagagaagtttgaactgctatctggccccatagtactgat 1211
||||||| |||| ||||| ||| ||| |||||| | | ||||||||||| |||| ||||
Sbjct: 198 tgagtttattcacaaggtgcaaaagatgtttgaccagttatctggccccgtagttttgat 257
Query: 1212 ttgtgggcaaaacaaagctcagtcgaaaggacaactacttttttctatgaataaagggca 1271
||| |||||| | ||||||||||| |||||| | |||||||||| ||| |||||||
Sbjct: 258 ttgcgggcaatttgatgctcagtcgaatggacaattccttttttctacaaatgaagggca 317
Query: 1272 aaagacatcaaaagatggtgaaatttacaagccctttaatgtgttgtctatacagccacc 1331
||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||
Sbjct: 318 aaagacatcaaaagatggtgaaactaacaaggcctttaatgtgttgtctatacagacacc 377
Query: 1332 taaggatgagaaactactggtaatattcaagaaacaacttgaggaagataggaaaattgt 1391
|||||||||||| ||||||| | |||||| ||||||||||||||||| ||||||| |||
Sbjct: 378 taaggatgagaatctactggcagcattcaaaaaacaacttgaggaagacaggaaaagtgt 437
Query: 1392 gatttcac 1399
||||||||
Sbjct: 438 gatttcac 445
>gnl|LJGI|GO013029 weakly similar to UniRef100_A7P2W5 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 754
Score = 89.7 bits (45), Expect = 4e-17
Identities = 87/93 (93%), Gaps = 6/93 (6%)
Strand = Plus / Plus
Query: 28 ggcactgagctttatcaggagagattagttagagctcttgcacaacatttacaagttcct 87
|||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 668 ggcactgagctttatcag-agagat-agttagagctcttgcac-acatttac-agttcct 723
Query: 88 ttgttggtgtttgatagaagcatccttactcct 120
||| ||||||||||||| |||||||||||||||
Sbjct: 724 ttg-tggtgtttgatag-agcatccttactcct 754