Miyakogusa Predicted Gene

Lj0g3v0323909.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0323909.1 Non Characterized Hit- tr|K4BX01|K4BX01_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,75.95,0,seg,NULL; DUF3326,Protein of unknown function
DUF3326,NODE_38720_length_1458_cov_22.081619.path2.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g030640.1 | DUF3326 family protein | HC | chr1:10659114-10...   648   0.0  

>Medtr1g030640.1 | DUF3326 family protein | HC |
           chr1:10659114-10664114 | 20130731
          Length = 407

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/373 (83%), Positives = 337/373 (90%)

Query: 1   MQCKREYTSVMIVPTXXXXXXXXXXXXXLPVARALSSVVDCLITHPNVLNAAMLYWPMPN 60
           ++CKR+YTSVMIVPT             LPVARALSSVVDCLITHPNVLNAAMLYWPMPN
Sbjct: 34  LKCKRDYTSVMIVPTGTGAAIGGFAGDALPVARALSSVVDCLITHPNVLNAAMLYWPMPN 93

Query: 61  ALYVEGYALDRFAEGLWALQPVHQNRVGLVLDAGIEQELQVRQLQVADAARASLGLPVVE 120
           ALYVEGYALDRFAEG WALQPVHQNRVG+VLDAGIE+EL++RQLQVADAARASLGLPVVE
Sbjct: 94  ALYVEGYALDRFAEGSWALQPVHQNRVGIVLDAGIEEELRIRQLQVADAARASLGLPVVE 153

Query: 121 YIVTDTPLKVEKWVDPETGQSTGRIKHPDSLLRAVQTLMNRSKVNAIAVVGRFPXXXXXX 180
           Y VTDTPL+VEKW+DP+TG+STGRIKHPDSLLRAVQTL+NRSKVNA+AVVGRFP      
Sbjct: 154 YTVTDTPLEVEKWIDPKTGKSTGRIKHPDSLLRAVQTLVNRSKVNAVAVVGRFPDDDTDD 213

Query: 181 XXXYRQGMGIDLLAGVEAVISHLVVKEFQIPCAHAPALAPLTMSLSLSPKSAAEEIGYTF 240
              YRQG+G+DLLAGVEAVISHLVVKEFQIPCAHAPA+AP+ +SLSLSPKSAAEEIGYTF
Sbjct: 214 VDEYRQGLGVDLLAGVEAVISHLVVKEFQIPCAHAPAMAPIPLSLSLSPKSAAEEIGYTF 273

Query: 241 LPCVLAGLSNAPQYMVMHSESTDKGCIVARDVDSLILPKDACGGAGTLAFARNGKNKPLI 300
           LPCVLAGLS APQY+VMHSES +KGCI+A +VDS++LPKDACGG GTLAFARN KNKPLI
Sbjct: 274 LPCVLAGLSKAPQYLVMHSESMEKGCILASEVDSIVLPKDACGGEGTLAFARNAKNKPLI 333

Query: 301 IAVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPYSLRRNKILNIGCTPCM 360
           I VEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDP+SLRRNKI NIG T  M
Sbjct: 334 ITVEENETVLDDTADKLGLEVLHVSNYWEAIGVIAAHKAGIDPFSLRRNKIHNIGSTSFM 393

Query: 361 PVNGHSISRERAI 373
           PVNGHS +RERA+
Sbjct: 394 PVNGHSNTRERAV 406