Miyakogusa Predicted Gene

Lj0g3v0319579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0319579.1 Non Characterized Hit- tr|I1L4A0|I1L4A0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54918
PE,73.39,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
DUF789,Protein of unknown function DUF789,CUFF.21658.1
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g082450.1 | DUF789 family protein | HC | chr6:30867483-308...   227   9e-60
Medtr1g110070.1 | DUF789 family protein | HC | chr1:49637958-496...   131   7e-31
Medtr4g120990.1 | DUF789 family protein | HC | chr4:50085029-500...   112   5e-25
Medtr2g035080.1 | DUF789 family protein | HC | chr2:13476671-134...   102   5e-22
Medtr4g044297.2 | plant/F9H3-4 protein | HC | chr4:14861532-1485...    99   4e-21
Medtr4g044297.1 | plant/F9H3-4 protein | HC | chr4:14861145-1485...    99   4e-21
Medtr2g090210.1 | plant/F9H3-4 protein | HC | chr2:38298031-3830...    87   2e-17
Medtr1g087830.1 | DUF789 family protein | LC | chr1:39310095-393...    72   5e-13
Medtr1g077460.1 | plant/F9H3-4 protein | HC | chr1:34561378-3456...    71   9e-13
Medtr6g066280.1 | plant/F9H3-4 protein | HC | chr6:24650332-2465...    67   2e-11
Medtr1g087810.1 | DUF789 family protein | LC | chr1:39301659-392...    62   4e-10

>Medtr6g082450.1 | DUF789 family protein | HC |
           chr6:30867483-30862197 | 20130731
          Length = 401

 Score =  227 bits (579), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 125/232 (53%), Positives = 143/232 (61%), Gaps = 5/232 (2%)

Query: 1   MLGTALQFGDFRGEDRFYIPVXXXXXXXXXXXXXXDKSVENEAALKSQLVAFEDRXXXXX 60
           MLGTALQFG   GEDRFYIPV               ++   ++A KS+LVA E++     
Sbjct: 1   MLGTALQFGSVGGEDRFYIPVKARKNQNQRKKT---QNKSEDSASKSELVASENKNLNED 57

Query: 61  XXXXXXXXXXXXXXXXXIDRFLESTTPIVPVQYFSKTTMRGWKTCDVEYLSYFSLNDLWE 120
                            ID+FLESTTP+VP QYFSKTTMRGWKTCDVEY SYF+LNDLWE
Sbjct: 58  SLKKPSTCSSVEVVSN-IDKFLESTTPLVPAQYFSKTTMRGWKTCDVEYQSYFALNDLWE 116

Query: 121 SFREWSAYGAGVPLLLDGRESVVQYYVPYLSAIQLYGQSAKKSNAKPRYTGEXXXXXXXX 180
           SF+EWSAYGAGVPLLLD +ESVVQYYVPYLSAIQLYGQS KKS AK RY GE        
Sbjct: 117 SFKEWSAYGAGVPLLLDKKESVVQYYVPYLSAIQLYGQSDKKSIAKSRYVGEDSDVDYYR 176

Query: 181 XXXXXXXXXXEFGKRTEKFIAQ-SSQYRPGNVSFQMSSYLYMINTMRCKMGF 231
                     EFGKR +  I Q S+QY+ G+ S QMS    +      + GF
Sbjct: 177 DSSSDGSSDSEFGKRNKHSITQRSNQYQTGDASLQMSRLSALDKHFAAQEGF 228


>Medtr1g110070.1 | DUF789 family protein | HC |
           chr1:49637958-49633404 | 20130731
          Length = 408

 Score =  131 bits (329), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 95/185 (51%), Gaps = 14/185 (7%)

Query: 1   MLGTALQFGDFRGEDRFYIPVXXXXXXXXXXXXXXDK-----------SVENEAALKSQL 49
           MLGTA+ F   RGEDRFY P                +           S   E ++ S  
Sbjct: 1   MLGTAMNFSRGRGEDRFYNPPQARRALHTAENDRIRRAHSDVTPSRSSSAVREKSVDSVE 60

Query: 50  VAFEDR--XXXXXXXXXXXXXXXXXXXXXXIDRFLESTTPIVPVQYFSKTTMRGWKTCDV 107
              E+R                        ++RFLES TP VP Q+ SK + R ++TC+ 
Sbjct: 61  KKLENRVGSEETKKVVAVPSCEPEVKRLSNLERFLESITPSVPAQHLSKRSARSFRTCNE 120

Query: 108 EYLSYFSLNDLWESFREWSAYGAGVPLLLDGRESVVQYYVPYLSAIQLYGQSAKKSNAKP 167
           E   YF L DLWESFREWSAYGAGVPL+L+ ++SVVQYYVPYLS IQ+Y QS K    K 
Sbjct: 121 EVPPYFVLGDLWESFREWSAYGAGVPLVLNDKDSVVQYYVPYLSGIQIYVQSTKPP-VKS 179

Query: 168 RYTGE 172
           R  GE
Sbjct: 180 RQLGE 184


>Medtr4g120990.1 | DUF789 family protein | HC |
           chr4:50085029-50090392 | 20130731
          Length = 395

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 62/86 (72%)

Query: 78  IDRFLESTTPIVPVQYFSKTTMRGWKTCDVEYLSYFSLNDLWESFREWSAYGAGVPLLLD 137
           +DRFLE  TP VP QY  KT+ R WKT + E + Y+ L DLWESF+EWSAYGAGVPL+++
Sbjct: 73  LDRFLEYITPHVPAQYLPKTSSRRWKTKEAELVPYYVLGDLWESFKEWSAYGAGVPLVMN 132

Query: 138 GRESVVQYYVPYLSAIQLYGQSAKKS 163
           G ESV QYY   LSAIQLY    K S
Sbjct: 133 GNESVTQYYNVSLSAIQLYIDPTKPS 158


>Medtr2g035080.1 | DUF789 family protein | HC |
           chr2:13476671-13471541 | 20130731
          Length = 401

 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 56/84 (66%)

Query: 80  RFLESTTPIVPVQYFSKTTMRGWKTCDVEYLSYFSLNDLWESFREWSAYGAGVPLLLDGR 139
           RFLE TTP VP   F   + R WKT + E   YF L DLWESF+EWS YGAGVPL+L G 
Sbjct: 82  RFLEHTTPHVPAHSFPLKSKRRWKTVEPELQPYFVLGDLWESFKEWSVYGAGVPLVLSGN 141

Query: 140 ESVVQYYVPYLSAIQLYGQSAKKS 163
           ESV QYY   LSAIQLY   +K S
Sbjct: 142 ESVKQYYNVSLSAIQLYIDPSKPS 165


>Medtr4g044297.2 | plant/F9H3-4 protein | HC |
           chr4:14861532-14856514 | 20130731
          Length = 306

 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 4/83 (4%)

Query: 78  IDRFLESTTPIVPVQYFSKTTMRG----WKTCDVEYLSYFSLNDLWESFREWSAYGAGVP 133
           +D FL  TTPIVP ++  K  +R     W  CD E + YF+L+DLW  F EWSAYG GVP
Sbjct: 10  LDCFLHHTTPIVPSKFLQKHEIRNLNRLWHPCDRETVEYFTLSDLWNCFNEWSAYGVGVP 69

Query: 134 LLLDGRESVVQYYVPYLSAIQLY 156
           +     E++VQYYVPYLSAIQ++
Sbjct: 70  INFKNEETLVQYYVPYLSAIQIF 92


>Medtr4g044297.1 | plant/F9H3-4 protein | HC |
           chr4:14861145-14856487 | 20130731
          Length = 306

 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 4/83 (4%)

Query: 78  IDRFLESTTPIVPVQYFSKTTMRG----WKTCDVEYLSYFSLNDLWESFREWSAYGAGVP 133
           +D FL  TTPIVP ++  K  +R     W  CD E + YF+L+DLW  F EWSAYG GVP
Sbjct: 10  LDCFLHHTTPIVPSKFLQKHEIRNLNRLWHPCDRETVEYFTLSDLWNCFNEWSAYGVGVP 69

Query: 134 LLLDGRESVVQYYVPYLSAIQLY 156
           +     E++VQYYVPYLSAIQ++
Sbjct: 70  INFKNEETLVQYYVPYLSAIQIF 92


>Medtr2g090210.1 | plant/F9H3-4 protein | HC |
           chr2:38298031-38302273 | 20130731
          Length = 314

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 4/83 (4%)

Query: 78  IDRFLESTTPIVPVQYFSK---TTMRG-WKTCDVEYLSYFSLNDLWESFREWSAYGAGVP 133
           +D F+  TTP+V  Q+  K   T + G W+  + E + YF+L DLW+ + EWSAYGAGVP
Sbjct: 12  LDCFVRCTTPVVQSQFLPKSEITNLNGLWQPWEREKVEYFTLGDLWKCYDEWSAYGAGVP 71

Query: 134 LLLDGRESVVQYYVPYLSAIQLY 156
           + L   E++VQYYVPYLSAIQ++
Sbjct: 72  ITLTSGETLVQYYVPYLSAIQIF 94


>Medtr1g087830.1 | DUF789 family protein | LC |
           chr1:39310095-39307482 | 20130731
          Length = 309

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 6/85 (7%)

Query: 86  TPIVPVQYFSKTTMRGWKTCDVEYLSYFSLNDLWESFREWSAYGAGVPLLLDGRESVVQY 145
           TP+V V++ S+  + G  T   +   YF L DLWES+ EW+A+G  VPL+L+  E+V QY
Sbjct: 65  TPLVAVKFSSE--IEGSSTVS-QRKPYFVLEDLWESYNEWNAFGVEVPLVLNNHENVTQY 121

Query: 146 YVPYLSAIQLY---GQSAKKSNAKP 167
           +VP LSA+QLY    Q  KKS   P
Sbjct: 122 FVPSLSALQLYVEDDQGLKKSGFAP 146


>Medtr1g077460.1 | plant/F9H3-4 protein | HC |
           chr1:34561378-34565445 | 20130731
          Length = 344

 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 78  IDRFLESTTPIVP-----VQYFSKTTMRGWKTCDVEYLSYFSLNDLWESFREWSAYGAGV 132
           +DRF+   TP VP     +Q  S      W     + +  F L DLW+ +  WSA GAG 
Sbjct: 14  VDRFVLCVTPDVPFQTLDLQSCSHEVNSLWLPLGKDKVECFELKDLWDCYERWSALGAGT 73

Query: 133 PLLLDGRESVVQYYVPYLSAIQLY 156
           P+LL   +++ QYYVPYLS+IQ+Y
Sbjct: 74  PILLGNGDALTQYYVPYLSSIQIY 97


>Medtr6g066280.1 | plant/F9H3-4 protein | HC |
           chr6:24650332-24653230 | 20130731
          Length = 329

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 40/55 (72%)

Query: 102 WKTCDVEYLSYFSLNDLWESFREWSAYGAGVPLLLDGRESVVQYYVPYLSAIQLY 156
           W+T   + +  F+L DL++ F EWSAYG G P++L+  ++V  YYVPYLSAIQ+Y
Sbjct: 15  WQTIGKDSIECFTLKDLFDRFSEWSAYGVGTPVILENGDTVEHYYVPYLSAIQIY 69


>Medtr1g087810.1 | DUF789 family protein | LC |
           chr1:39301659-39299634 | 20130731
          Length = 322

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 91  VQYFSKTTMRGWKTCDVEYLSYFSLNDLWESFREWSAYGAGVPLLLDGRESVVQYYVPYL 150
           V++ SK  + G  + + E   YF L DLWES+ EWSA G  VP      E+V QY+ P L
Sbjct: 70  VKFSSKPKIEG-SSIESEGKPYFVLEDLWESYNEWSAIGVEVPFKQIDHETVAQYFAPSL 128

Query: 151 SAIQLY---GQSAKKS 163
           SA+QLY    Q  KKS
Sbjct: 129 SALQLYVEDDQGLKKS 144