Miyakogusa Predicted Gene
- Lj0g3v0315489.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0315489.2 Non Chatacterized Hit- tr|D8RGM4|D8RGM4_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.36,3e-18,IQ,IQ motif, EF-hand binding site; P-loop
containing nucleoside triphosphate hydrolases,NULL; Short
,CUFF.21552.2
(960 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV779982 similar to UniRef100_A7PMP7 Cluster: Chromosom... 775 0.0
gnl|LJGI|TC57679 similar to UniRef100_A7PMP7 Cluster: Chromosome... 246 2e-64
gnl|LJGI|GO031752 weakly similar to UniRef100_A7QI65 Cluster: Ch... 194 7e-49
gnl|LJGI|GO023226 similar to UniRef100_A7QI64 Cluster: Chromosom... 155 6e-37
>gnl|LJGI|AV779982 similar to UniRef100_A7PMP7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 516
Score = 775 bits (391), Expect = 0.0
Identities = 455/472 (96%), Gaps = 5/472 (1%)
Strand = Plus / Plus
Query: 1 atgggcaaatcaccaggaaaatggatcaaaactgtactatttgggaaaaaatcaaccaga 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 45 atgggcaaatcaccaggaaaatggatcaaaactgtactattagggaaaaaatcaaccaga 104
Query: 61 tcaaatatttcaa-aaggaagagagaaacttgctattagaaaagaaggagtagttaactc 119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tcaaatatttcaagaaggaagagagaaacttgctattagaaaagaaggagtagttaactc 164
Query: 120 caaggtgtcagaaacgggtttggctttagagccaacctccaatgcgatcacaagtcatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 caaggtgtcagaaacgggtttggctttagagccaacctccaatgcgatcacaagtcatga 224
Query: 180 agaagacctggagctggagaacaaagaagtagataatattttacctggaaaccaagaaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 agaagacctggagctggagaacaaagaagtagataatattttacctggaaaccaagaaat 284
Query: 240 tgaatctgttcatcaagatgcaccacttgatccagagnnnnnnnggcaggatgaagcggc 299
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 285 tgaatctgttcatcaagatgcaccacttgatccagagaaaaaaaggcaggatgaagcggc 344
Query: 300 tacgaa-ggcacagg-ctgcc-ttcaggg-gttatttggctcggagagcatttagggctc 355
|||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 345 tacgaacggcacaggtctgccgttcagggcgttatttggctcggagagcatttagggctc 404
Query: 356 taaaaggcataataaggttgcaagcacttattcgtgggcacttggttaggagacaagctg 415
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 405 taaaaggcataataaggtcgcaagcacttatgcgtgggcacttggttaggagacaagctg 464
Query: 416 ttagtacattatgctgtatgtatggaattgtcaagttacaagcacttgcccg 467
| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 465 taagtacattatgctgtatgtatggaatggtcaagttacaagcacttgcccg 516
>gnl|LJGI|TC57679 similar to UniRef100_A7PMP7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 832
Score = 246 bits (124), Expect = 2e-64
Identities = 286/340 (84%)
Strand = Plus / Plus
Query: 307 gcacaggctgccttcaggggttatttggctcggagagcatttagggctctaaaaggcata 366
||||| ||||| ||||||||||| ||||||| || |||| |||||| ||||||||||||
Sbjct: 474 gcacaagctgctttcaggggttacatggctcgcagggcatatagggccctaaaaggcata 533
Query: 367 ataaggttgcaagcacttattcgtgggcacttggttaggagacaagctgttagtacatta 426
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 534 ataaggttgcaagcacttattcgtgggcatttggttaggagacaagctgtcgctacatta 593
Query: 427 tgctgtatgtatggaattgtcaagttacaagcacttgcccgtggtggcagagttagacag 486
||||||||| |||| ||||| |||||||| ||||||| ||||| || |||||||||||
Sbjct: 594 tgctgtatgcatgggattgtaaagttacaggcacttgttcgtggcgggagagttagacaa 653
Query: 487 tctgaggttggatttgaaattaatgaaaagtgtaatgttttgaagcctcaggatggccag 546
||||| |||||||||| ||| |||| ||||| ||| | || ||| ||| |||||||
Sbjct: 654 tctgatgttggatttgcaatccatgagaagtgcaatctatttaagactctggatggcaga 713
Query: 547 cttgtcaatccaattgctgtatccacagaaattatgaagctatcagcaaatactttcatc 606
||||| | || ||| ||| |||||| ||||| |||| || |||||||||||| ||
Sbjct: 714 cttgttgagtcagttggtgtttccacaaaaatttcaaagcagtctgcaaatactttcgtc 773
Query: 607 cgtaagcttcttgcttcatcaactactataatggccctgc 646
||||||||||| ||||||||||||| |||||||| ||||
Sbjct: 774 tgtaagcttctttcttcatcaactacaataatggctctgc 813
Score = 133 bits (67), Expect = 2e-30
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1 atgggcaaatcaccaggaaaatggatcaaaactgtactatttgggaaaaaatcaaccaga 60
||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 159 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 218
Query: 61 tcaaatatttcaaaaggaagagagaaacttg 91
|||||||||||||||||||||||||| ||||
Sbjct: 219 tcaaatatttcaaaaggaagagagaagcttg 249
>gnl|LJGI|GO031752 weakly similar to UniRef100_A7QI65 Cluster: Chromosome chr17
scaffold_101, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_101, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 440
Score = 194 bits (98), Expect = 7e-49
Identities = 101/102 (99%)
Strand = Plus / Plus
Query: 856 gtcccagtgcaagcaaatcctgaagttgagaaaccaaaacgcaacatgaggaaagttcca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gtcccagtgcaagcaaatcctgaagttgagaaaccaaaacgcaacatgaggaaagttcca 148
Query: 916 agccaaccctcggatcctgcgcaagaaaatccacaaaatgag 957
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 149 agccaacccttggatcctgcgcaagaaaatccacaaaatgag 190
Score = 170 bits (86), Expect = 1e-41
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 873 tcctgaagttgagaaaccaaaacgcaacatgaggaaagttccaagccaaccctcggatcc 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgaagttgagaaaccaaaacgcaacatgaggaaagttccaagccaaccctcggatcc 60
Query: 933 tgcgcaagaaaatccacaaaatgagt 958
||||||||||||||||||||||||||
Sbjct: 61 tgcgcaagaaaatccacaaaatgagt 86
>gnl|LJGI|GO023226 similar to UniRef100_A7QI64 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 664
Score = 155 bits (78), Expect = 6e-37
Identities = 130/146 (89%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 307 gcacaggctgccttcaggggttatttggctcggagagcatttagggctctaaaaggcata 366
||||| ||||| ||||||||||| ||||||| || |||| |||||| ||||||||||||
Sbjct: 520 gcacaagctgctttcaggggttacatggctcgcagggcatatagggccctaaaaggcata 579
Query: 367 ataaggttgcaagcacttattcgtgggcacttggttaggagacaagctgttagtacatta 426
||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||
Sbjct: 580 ataaggttgcaagcactta-tcgtgggcatttggttaggagacaagctgtcgctacatta 638
Query: 427 tgctgtatgtatggaattgtcaagtt 452
||||||||| |||| ||||| |||||
Sbjct: 639 tgctgtatgcatgggattgtaaagtt 664
Score = 127 bits (64), Expect = 1e-28
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 atgggcaaatcaccaggaaaatggatcaaaactgtactatttgggaaaaaatcaaccaga 60
||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |
Sbjct: 208 atggggaaatcacccggaaaatggatcaaaactgtactatttgggaaaaagtcatccaaa 267
Query: 61 tcaaatatttcaaaaggaagagag 84
||||||||||||||||||||||||
Sbjct: 268 tcaaatatttcaaaaggaagagag 291