Miyakogusa Predicted Gene
- Lj0g3v0315339.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0315339.1 Non Chatacterized Hit- tr|D8RVD9|D8RVD9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,42.71,2e-17,SUBFAMILY NOT NAMED,NULL; DNA REPLICATION REGULATOR
DPB11-RELATED,NULL; BRCT,BRCT domain; no descrip,CUFF.21300.1
(807 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63246 weakly similar to UniRef100_A7PAJ4 Cluster: Chr... 1542 0.0
gnl|LJGI|FS336050 weakly similar to UniRef100_A7PAJ4 Cluster: Ch... 1092 0.0
gnl|LJGI|FS318285 weakly similar to UniRef100_Q9ZW89 Cluster: F5... 111 7e-24
>gnl|LJGI|TC63246 weakly similar to UniRef100_A7PAJ4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 1334
Score = 1542 bits (778), Expect = 0.0
Identities = 798/807 (98%)
Strand = Plus / Plus
Query: 1 atgggaaaggtgttggtaaccgttacaggctaccatggcttggagcgtttcaacctcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgggaaaggtgttggtaaccgttacaggctaccatggcttggagcgtttcaacctcatc 133
Query: 61 aagttgattgcatacgcaggttcttcttatagcggtagaatggcggaattcataaatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aagttgattgcatacgcaggttcttcttatagcggtagaatggcggaattcataaatcac 193
Query: 121 cttgtctgcttcaagttcgaaggaaggaaatacgagattgctagaaggctcaaaataccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttgtctgcttcaagttcgaaggaaggaaatacgagattgctagaaggctcaaaataccc 253
Query: 181 atagttaaccaccgttggattgaagattgcttaagggaacgaacacgccttccagtagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atagttaaccaccgttggattgaagattgcttaagggaacgaacacgccttccagtagat 313
Query: 241 tcttacatgttgcaaagtggacatgaagtagggccattgtctctgcgagttccggaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcttacatgttgcaaagtggacatgaagtagggccattgtctctgcgagttccggaaacc 373
Query: 301 tttggaccaaaacagtggcttattcaatccaccaacctcaattctgaacctttcggtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttggaccaaaacagtggcttattcaatccaccaacctcaattctgaacctttcggtcct 433
Query: 361 gttttggaagattcagagatactgctcatatatgagcatcaggagaggccagggaaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gttttggaagattcagagatactgctcatatatgagcatcaggagaggccagggaaagga 493
Query: 421 aaaagaactatttgcagtgatagtggagttagtattgcggctgggaaatcttgcaaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aaaagaactatttgcagtgatagtggagttagtattgcggctgggaaatcttgcaaagaa 553
Query: 481 agaagaacggataccctgaacaccaaagatggtgctatctcttgcctttctggtggtgtc 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agaagaacggataccccgaacaccaaagatggtgctatctcttgcctttctggtggtgtc 613
Query: 541 actattgactatcttccagataatagtagttctggacctgatgatggcatatttaatnnn 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 actattgactatcttccagataatagtagttctggacctgatgatggcatatttaataaa 673
Query: 601 nnnngatcaaccactggtggttcagatgagaatgagctgatcaaatctacaactttgttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aaaagatcaaccactggtggttcagatgagaatgagctgatcaaatctacaactttgttt 733
Query: 661 gttgaagataccccacttgtgccacagacttcaatagatagaagttctagggctgaaaag 720
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gttgaagataccccagttgtgccacagacttcaatagatagaagttctagggctgaaaag 793
Query: 721 tccaaagattgtgatcagaaaattgagcatgcagccaccactgatcaaaagttatgctcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tccaaagattgtgatcagaaaattgagcatgcagccaccactgatcaaaagttatgctcc 853
Query: 781 ctgacaatcccatgttacaatttggcc 807
|||||||||||||||||||||||||||
Sbjct: 854 ctgacaatcccatgttacaatttggcc 880
>gnl|LJGI|FS336050 weakly similar to UniRef100_A7PAJ4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (50%)
Length = 731
Score = 1092 bits (551), Expect = 0.0
Identities = 601/623 (96%), Gaps = 14/623 (2%)
Strand = Plus / Plus
Query: 1 atgggaaaggtgttggtaaccgttacaggctaccatggcttggagcgtttcaacctcatc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 123 atgggaaaggtgttggtaaccgttacaggctaccatggcttggagcttttcaacctcatc 182
Query: 61 aagttgattgcatacgcaggttcttcttatagcggtagaatggcggaattcataaatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagttgattgcatacgcaggttcttcttatagcggtagaatggcggaattcataaatcac 242
Query: 121 cttgtctgcttcaagttcgaaggaaggaaatacgagattgctagaaggctcaaaataccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cttgtctgcttcaagttcgaaggaaggaaatacgagattgctagaaggctcaaaataccc 302
Query: 181 atagttaaccaccgttggattgaagattgcttaagggaacgaacacgccttccagtagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atagttaaccaccgttggattgaagattgcttaagggaacgaacacgccttccagtagat 362
Query: 241 tcttacatgttgcaaagtggacatgaagtagggccattgtctctgcgagttccggaaacc 300
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 363 tcttacatgttgcaaag--------------ggccattgtctctgcgagttccggaaacc 408
Query: 301 tttggaccaaaacagtggcttattcaatccaccaacctcaattctgaacctttcggtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tttggaccaaaacagtggcttattcaatccaccaacctcaattctgaacctttcggtcct 468
Query: 361 gttttggaagattcagagatactgctcatatatgagcatcaggagaggccagggaaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gttttggaagattcagagatactgctcatatatgagcatcaggagaggccagggaaagga 528
Query: 421 aaaagaactatttgcagtgatagtggagttagtattgcggctgggaaatcttgcaaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaaagaactatttgcagtgatagtggagttagtattgcggctgggaaatcttgcaaagaa 588
Query: 481 agaagaacggataccctgaacaccaaagatggtgctatctcttgcctttctggtggtgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 agaagaacggataccctgaacaccaaagatggtgctatctcttgcctttctggtggtgtc 648
Query: 541 actattgactatcttccagataatagtagttctggacctgatgatggcatatttaatnnn 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 actattgactatcttccagataatagtagttctggacctgatgatggcatatttaataaa 708
Query: 601 nnnngatcaaccactggtggttc 623
|||||||||||||||||||
Sbjct: 709 aaaagatcaaccactggtggttc 731
>gnl|LJGI|FS318285 weakly similar to UniRef100_Q9ZW89 Cluster: F5A8.9 protein; n=1;
Arabidopsis thaliana|Rep: F5A8.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 773
Score = 111 bits (56), Expect = 7e-24
Identities = 125/148 (84%)
Strand = Plus / Plus
Query: 133 aagttcgaaggaaggaaatacgagattgctagaaggctcaaaatacccatagttaaccac 192
||||| ||||||| |||||| || ||||| |||||||| | ||||| |||| |||||
Sbjct: 240 aagtttgaaggaaagaaatatgatattgccagaaggcttagcatacctgtagtcaaccat 299
Query: 193 cgttggattgaagattgcttaagggaacgaacacgccttccagtagattcttacatgttg 252
|| ||||||||||||||| |||||||| ||| ||||| ||| |||||||||| | |||
Sbjct: 300 cgctggattgaagattgcataagggaaggaaagcgcctaccaatagattcttataccttg 359
Query: 253 caaagtggacatgaagtagggccattgt 280
||||||||||| ||||||||||||||||
Sbjct: 360 caaagtggacaagaagtagggccattgt 387
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 28 ggctaccatggcttggagcgtttcaacctcatcaagttgatt 69
||||||||||| |||||||| ||||| ||||||||| |||||
Sbjct: 135 ggctaccatggattggagcggttcaatctcatcaagctgatt 176