Miyakogusa Predicted Gene

Lj0g3v0310479.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0310479.1 Non Chatacterized Hit- tr|D8QN06|D8QN06_SELML
Putative uncharacterized protein OS=Selaginella
moelle,24.03,3,WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain; WD_REPEATS_2,WD40 repeat; ,CUFF.20954.1
         (777 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome...   708   0.0  
gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosom...   297   5e-80
gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome...   293   8e-79

>gnl|LJGI|TC59011 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 787

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtacctttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtacctttgg 490

                                                                       
Query: 61  aactctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtcccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aactctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtcccaca 550

                                                                       
Query: 121 agtgttgcctggtcacgggatgccaaacttttcgcagcaggatttatgcactctaagctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agtgttgcctggtcacgggatgccaaacttttcgcagcaggatttatgcactctaagctt 610

                                                                       
Query: 181 caactctgggatgctgagacttctaagccaataagagtcctagaaagtcatggtcaaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 caactctgggatgctgagacttctaagccaataagagtcctagaaagtcatggtcaaagg 670

                                                                       
Query: 241 attggaaccattgcatggagtggcgatactttaacttctggaagccatgacaaatctata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 attggaaccattgcatggagtggcgatactttaacttctggaagccatgacaaatctata 730

                                                                    
Query: 301 atcaaccatgatgttagagcaagaagaaatgttatttcacgggtaaaagcacacgga 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atcaaccatgatgttagagcaagaagaaatgttatttcacgggtaaaagcacacgga 787


>gnl|LJGI|FS330543 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 825

 Score =  297 bits (150), Expect = 5e-80
 Identities = 150/150 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtacctttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atggattgggggaaaaacaacattcttgctgttgctttgggatcagaaatgtacctttgg 735

                                                                       
Query: 61  aactctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtcccaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aactctgtgaacaacaatgtacataggttgtttgaagccactcacaatgattgtcccaca 795

                                         
Query: 121 agtgttgcctggtcacgggatgccaaactt 150
           ||||||||||||||||||||||||||||||
Sbjct: 796 agtgttgcctggtcacgggatgccaaactt 825


>gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 629

 Score =  293 bits (148), Expect = 8e-79
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                       
Query: 630 gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagcccagatgggttaacagtggtgtcagctggggcagatgaaactcttcgcttttggga 60

                                                                       
Query: 690 tatttttgggccacctgctactgatacatcaaagatctcacatctggataaccttttgtc 749
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatttttgggccacctgctactgatacatcaaagatctcacatctggataaccttttgtc 120

                                       
Query: 750 cctgaagatatccgcattaagataacat 777
           ||||||||||||||||||||||||||||
Sbjct: 121 cctgaagatatccgcattaagataacat 148