Miyakogusa Predicted Gene

Lj0g3v0309879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0309879.1 NODE_67104_length_933_cov_108.628082.path2.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22120.2 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...   173   3e-44
AT2G22120.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...   172   3e-44
AT1G11020.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...    76   4e-15
AT1G50440.3 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...    65   1e-11
AT1G50440.2 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...    65   1e-11
AT1G50440.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...    65   1e-11

>AT2G22120.2 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr2:9394026-9396979 FORWARD LENGTH=363
          Length = 363

 Score =  173 bits (438), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 89/114 (78%)

Query: 1   MWTDCTTCFESCGTMATXXXXXXXXXXXXXXPLLFIMALIVLGLFTVIGIFYSVLVATMV 60
           MW DCT C E C +  +              PLLFI AL++LGLFTVIGIFYSVLVATMV
Sbjct: 211 MWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVILGLFTVIGIFYSVLVATMV 270

Query: 61  GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQLKTLGLL 114
           GQRIWQRHYHILAKRMLTKEYVVEDVDGEMT S+WSPP LP EHVQQLKTLGLL
Sbjct: 271 GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALPTEHVQQLKTLGLL 324


>AT2G22120.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr2:9394026-9396768 FORWARD LENGTH=324
          Length = 324

 Score =  172 bits (437), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 84/114 (73%), Positives = 89/114 (78%)

Query: 1   MWTDCTTCFESCGTMATXXXXXXXXXXXXXXPLLFIMALIVLGLFTVIGIFYSVLVATMV 60
           MW DCT C E C +  +              PLLFI AL++LGLFTVIGIFYSVLVATMV
Sbjct: 211 MWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVILGLFTVIGIFYSVLVATMV 270

Query: 61  GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQLKTLGLL 114
           GQRIWQRHYHILAKRMLTKEYVVEDVDGEMT S+WSPP LP EHVQQLKTLGLL
Sbjct: 271 GQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALPTEHVQQLKTLGLL 324


>AT1G11020.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr1:3676968-3678350 FORWARD LENGTH=321
          Length = 321

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 44/67 (65%), Gaps = 5/67 (7%)

Query: 48  IGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPPVLPPEHVQQ 107
           +G+ Y  L ATM  QRIWQRHYHIL KR LTKEY+VED+ G  T     PP L  EH  +
Sbjct: 260 LGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYT-----PPKLDAEHEGR 314

Query: 108 LKTLGLL 114
           LK L LL
Sbjct: 315 LKMLKLL 321


>AT1G50440.3 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr1:18686099-18687646 FORWARD LENGTH=250
          Length = 250

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 7/75 (9%)

Query: 39  LIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPP 98
           L VL +  ++G+ Y   +A + GQ+I +RHYH+LAK+ LTKEY+VED D +      + P
Sbjct: 182 LAVLAI-VLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRDCK------NVP 234

Query: 99  VLPPEHVQQLKTLGL 113
            L   HV +LK LGL
Sbjct: 235 ELDQSHVMELKMLGL 249


>AT1G50440.2 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr1:18686099-18687646 FORWARD LENGTH=250
          Length = 250

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 7/75 (9%)

Query: 39  LIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPP 98
           L VL +  ++G+ Y   +A + GQ+I +RHYH+LAK+ LTKEY+VED D +      + P
Sbjct: 182 LAVLAI-VLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRDCK------NVP 234

Query: 99  VLPPEHVQQLKTLGL 113
            L   HV +LK LGL
Sbjct: 235 ELDQSHVMELKMLGL 249


>AT1G50440.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr1:18686099-18687646 FORWARD LENGTH=250
          Length = 250

 Score = 64.7 bits (156), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 7/75 (9%)

Query: 39  LIVLGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTDSDWSPP 98
           L VL +  ++G+ Y   +A + GQ+I +RHYH+LAK+ LTKEY+VED D +      + P
Sbjct: 182 LAVLAI-VLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRDCK------NVP 234

Query: 99  VLPPEHVQQLKTLGL 113
            L   HV +LK LGL
Sbjct: 235 ELDQSHVMELKMLGL 249