Miyakogusa Predicted Gene
- Lj0g3v0308749.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0308749.1 tr|G7J207|G7J207_MEDTR ABI3-interacting protein
OS=Medicago truncatula GN=MTR_3g056070 PE=4 SV=1,28.24,2e-18,seg,NULL;
coiled-coil,NULL; Frigida,Frigida-like; FAMILY NOT
NAMED,NULL,CUFF.20859.1
(1050 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66034 341 5e-93
gnl|LJGI|BP043783 similar to UniRef100_Q4C4Z4 Cluster: Isopenten... 244 9e-64
gnl|LJGI|TC63372 206 2e-52
gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotei... 200 1e-50
>gnl|LJGI|TC66034
Length = 677
Score = 341 bits (172), Expect = 5e-93
Identities = 313/360 (86%)
Strand = Plus / Plus
Query: 666 cctgggttttgccgacaaggtccctgattttgttcagacccttattaagaagcagcagca 725
||||||||| | ||||| ||| ||||||||||||||| ||||||||||||| || || |
Sbjct: 7 cctgggtttcacagacaaagtctctgattttgttcagagccttattaagaaggagtagta 66
Query: 726 tattgaagctgttagattcatctgtgaatttaaattggcagaccagagtcaaccagttga 785
| ||||||||||||||||||| |||| |||||| |||| |||| ||| |||||| |||||
Sbjct: 67 ttttgaagctgttagattcatttgtgcatttaagttggaagacaagaatcaacctgttga 126
Query: 786 tctcttgcgggaatacacgcagaatgcaaaactgatttctgagagctgttgcaggaacac 845
|||||||||| ||||| |||||||||||||||||||||||| | || ||||| ||||||
Sbjct: 127 tctcttgcggaaatacgcgcagaatgcaaaactgatttctgggcgcatttgcaagaacac 186
Query: 846 caaatcccttgaaatcaaggataaggccagagatcaagaaattgctaccctgaaaagtgt 905
|| || ||||||||||||||| | |||||||||||||||||||||| ||||||||||||
Sbjct: 187 catgtctcttgaaatcaaggatgatgccagagatcaagaaattgctagcctgaaaagtgt 246
Query: 906 tctacagtgcatttcagacaacaatctagactctgagggtctaattagcgagattcatga 965
|| ||| ||||||||||||||||||||||| ||||||| |||||||| |||||||| |
Sbjct: 247 tcaacaatgcatttcagacaacaatctagaatctgaggatctaattaatgagattcaaca 306
Query: 966 tcgcattactgagctaaataggcaaaatggcagtggtgtttatttcctaaggaaaagaaa 1025
|||||||| || ||||| | || |||| |||| |||||||||| |||||||||||||||
Sbjct: 307 tcgcattaatgggctaagttgggaaaaaggcattggtgtttataacctaaggaaaagaaa 366
>gnl|LJGI|BP043783 similar to UniRef100_Q4C4Z4 Cluster: Isopentenyl-diphosphate
delta-isomerase; n=1; Crocosphaera watsonii WH 8501|Rep:
Isopentenyl-diphosphate delta-isomerase - Crocosphaera
watsonii, partial (5%)
Length = 482
Score = 244 bits (123), Expect = 9e-64
Identities = 131/134 (97%)
Strand = Plus / Minus
Query: 917 tttcagacaacaatctagactctgagggtctaattagcgagattcatgatcgcattactg 976
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttcagacnaccatctagactctgagggtctaattagcgagattcatgatcgcattactg 423
Query: 977 agctaaataggcaaaatggcagtggtgtttatttcctaaggaaaagaaatgtggtaaaga 1036
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agctaaataggccaaatggcagtggtgtttatttcctaaggaaaagaaatgtggtaaaga 363
Query: 1037 aaagattctaatgg 1050
||||||||||||||
Sbjct: 362 aaagattctaatgg 349
>gnl|LJGI|TC63372
Length = 728
Score = 206 bits (104), Expect = 2e-52
Identities = 256/309 (82%), Gaps = 12/309 (3%)
Strand = Plus / Plus
Query: 698 ttcagacccttattaagaagcagcagcatattgaagctgttagattcatctgtgaattta 757
|||||| |||| ||||||||||||| ||||||||||||||||||||||| |||| |||||
Sbjct: 13 ttcagaaccttgttaagaagcagcaacatattgaagctgttagattcatttgtgcattta 72
Query: 758 aattggcagaccagagtcaaccagttgatctcttgcgggaatacacgcagaatgcaaaac 817
|||| || ||| ||| |||||| || ||||||||| || |||||| ||||||||||||||
Sbjct: 73 aattagctgacaagaatcaacctgtcgatctcttgtggaaatacatgcagaatgcaaaac 132
Query: 818 tgatttctgagagctgttgcaggaacaccaaatcccttgaaatcaaggataaggccagag 877
|| ||||||| |||||||| |||||||||||| |||||||||||||||
Sbjct: 133 tggtttctga------------gaacaccacctcccttgaaatccaggataaggccagag 180
Query: 878 atcaagaaattgctaccctgaaaagtgttctacagtgcatttcagacaacaatctagact 937
|||||||| |||| || ||| || |||||||| || ||||||||||||||| |||| |
Sbjct: 181 atcaagaagttgccactttgacaaatgttctactgtccatttcagacaacaagttagaat 240
Query: 938 ctgagggtctaattagcgagattcatgatcgcattactgagctaaataggcaaaatggca 997
||| ||||||| ||| ||||||| ||||||||| |||||||| ||||| ||||| ||
Sbjct: 241 ctgtgggtctacttaatgagattcgagatcgcattcttgagctaattaggcgaaatgtca 300
Query: 998 gtggtgttt 1006
|| ||||||
Sbjct: 301 gtagtgttt 309
>gnl|LJGI|GO024999 UniRef100_Q3LX78 Cluster: Envelope glycoprotein; n=1; Human
immunodeficiency virus 1|Rep: Envelope glycoprotein -
Human immunodeficiency virus 1, partial (8%)
Length = 687
Score = 200 bits (101), Expect = 1e-50
Identities = 179/205 (87%)
Strand = Plus / Plus
Query: 778 ccagttgatctcttgcgggaatacacgcagaatgcaaaactgatttctgagagctgttgc 837
||||||||||| ||||| |||||| |||||||||||||||||||||||||| | |||||
Sbjct: 40 ccagttgatctattgcgagaatacgtgcagaatgcaaaactgatttctgagatcagttgc 99
Query: 838 aggaacaccaaatcccttgaaatcaaggataaggccagagatcaagaaattgctaccctg 897
| ||||||||| |||||||||||||||||||||| ||||||||||||||| || || ||
Sbjct: 100 aagaacaccaactcccttgaaatcaaggataaggtcagagatcaagaaatggcaactttg 159
Query: 898 aaaagtgttctacagtgcatttcagacaacaatctagactctgagggtctaattagcgag 957
| || ||||||| ||||||||||||||||||| ||||| |||| || |||||||| |||
Sbjct: 160 acaaatgttctagagtgcatttcagacaacaacctagaatctggggatctaattaatgag 219
Query: 958 attcatgatcgcattactgagctaa 982
||| | ||||||||| ||||||||
Sbjct: 220 attgaagatcgcattcttgagctaa 244