Miyakogusa Predicted Gene

Lj0g3v0307399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307399.1 tr|Q012S2|Q012S2_OSTTA WGS project CAID00000000
data, contig chromosome 08 OS=Ostreococcus tauri
GN=,32.22,4e-17,DUF1997,Protein of unknown function
DUF1997,CUFF.20744.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04440.1 | Symbols:  | Protein of unknown function (DUF1997) ...   278   9e-76
AT4G31115.1 | Symbols:  | Protein of unknown function (DUF1997) ...    87   7e-18
AT4G31115.2 | Symbols:  | Protein of unknown function (DUF1997) ...    86   1e-17

>AT5G04440.1 | Symbols:  | Protein of unknown function (DUF1997) |
           chr5:1254957-1256624 FORWARD LENGTH=255
          Length = 255

 Score =  278 bits (712), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 130/166 (78%), Positives = 146/166 (87%)

Query: 1   MRLPASQYSVLDAERIERVNEDTFRCYVYRIKFFTLEVCPVLLVKVEEQPDGCCIKLLSC 60
           M LPASQYSVLDAERIERV+++TFRCYVY  KFF  EVCPVLLV+VEEQP+GCCIKLLSC
Sbjct: 90  MSLPASQYSVLDAERIERVDDNTFRCYVYTFKFFNFEVCPVLLVRVEEQPNGCCIKLLSC 149

Query: 61  KLEGSPVVAAQNEKFDAIMVNRISCDSDSDKSLMQQITSDTVIEVSIDLPFAFQAIPKQA 120
           KLEGSPVV AQN+KFDA MVNR+SCDS  + S  QQITSD VIEV+I++PFAF+  P  A
Sbjct: 150 KLEGSPVVVAQNDKFDASMVNRVSCDSTQEGSSEQQITSDAVIEVNIEIPFAFRVFPVGA 209

Query: 121 MESAGTQVLDQILKIMLPRFMSQLVKDYEAWASGDTSRQPLGTGEI 166
           +E+ GTQVLDQILK+MLPRF+SQL KDY AWASGDTSRQPLGTGEI
Sbjct: 210 IEATGTQVLDQILKLMLPRFLSQLSKDYHAWASGDTSRQPLGTGEI 255


>AT4G31115.1 | Symbols:  | Protein of unknown function (DUF1997) |
           chr4:15130243-15131847 FORWARD LENGTH=250
          Length = 250

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 94/157 (59%), Gaps = 9/157 (5%)

Query: 1   MRLPASQYSVLDAERIERVN-----EDTFRCYVYRIKFFTLEVCPVLLVKVEEQPDGCCI 55
           ++ P+   +V++A+ ++  +     +DT+RC + +++  + EV PVL+++V    + C +
Sbjct: 84  LKHPSGMEAVINAKALQSYHLVDDSDDTYRCTLPKVQLMSFEVYPVLVLRVTPTQEDCTV 143

Query: 56  KLLSCKLEGSPVVAAQNEKFDAIMVNRISCDSDSDKSLMQ-QITSDTVIEVSIDLPFAFQ 114
           +LLSCKLEGS ++  Q+E+F AIM N ++ + +  +  ++  +  +  +E+S      F 
Sbjct: 144 ELLSCKLEGSELLENQSERFSAIMTNCMTWNMEHPEPFLEVDVRLNVTLEISTR---PFT 200

Query: 115 AIPKQAMESAGTQVLDQILKIMLPRFMSQLVKDYEAW 151
            +P  A+E+ G  V+  ++  ++P  + QL+KDY+ W
Sbjct: 201 MLPVSAVEAPGNLVMQTLVDTLVPLLLQQLLKDYDEW 237


>AT4G31115.2 | Symbols:  | Protein of unknown function (DUF1997) |
           chr4:15130243-15131847 FORWARD LENGTH=274
          Length = 274

 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 94/157 (59%), Gaps = 9/157 (5%)

Query: 1   MRLPASQYSVLDAERIERVN-----EDTFRCYVYRIKFFTLEVCPVLLVKVEEQPDGCCI 55
           ++ P+   +V++A+ ++  +     +DT+RC + +++  + EV PVL+++V    + C +
Sbjct: 108 LKHPSGMEAVINAKALQSYHLVDDSDDTYRCTLPKVQLMSFEVYPVLVLRVTPTQEDCTV 167

Query: 56  KLLSCKLEGSPVVAAQNEKFDAIMVNRISCDSDSDKSLMQ-QITSDTVIEVSIDLPFAFQ 114
           +LLSCKLEGS ++  Q+E+F AIM N ++ + +  +  ++  +  +  +E+S      F 
Sbjct: 168 ELLSCKLEGSELLENQSERFSAIMTNCMTWNMEHPEPFLEVDVRLNVTLEISTR---PFT 224

Query: 115 AIPKQAMESAGTQVLDQILKIMLPRFMSQLVKDYEAW 151
            +P  A+E+ G  V+  ++  ++P  + QL+KDY+ W
Sbjct: 225 MLPVSAVEAPGNLVMQTLVDTLVPLLLQQLLKDYDEW 261