Miyakogusa Predicted Gene

Lj0g3v0307059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307059.1 Non Chatacterized Hit- tr|F6HY96|F6HY96_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,25.13,0.0000000009,LysM domain,NULL; seg,NULL;
LysM,Peptidoglycan-binding lysin domain,CUFF.20702.1
         (314 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g39070.1                                                       338   6e-93

>Glyma08g39070.1 
          Length = 592

 Score =  338 bits (866), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 178/324 (54%), Positives = 213/324 (65%), Gaps = 11/324 (3%)

Query: 1   MASFTQLFSFLFPLLATSLHRISAFEVSIKTSVIAPLNCSANIKTCNAFLYHISHNHTVE 60
           M SFT L S LFPL  TS  R+ A EVSIKT+ ++PLNCS+ I+TCNA LYHIS N T+E
Sbjct: 1   MISFTNLLSLLFPLFTTSFVRVFASEVSIKTTNLSPLNCSSKIRTCNASLYHISQNLTIE 60

Query: 61  EIATFYSVSSSQINPIMYRTRQDYLITVPCSCKITNELSGYFYDTTYTVRPNDIFSNISD 120
           +IA+FYSV SSQI PIM+  +QDYLI VPCSCK T+ LSGYFYDTTY VRPND F+NIS+
Sbjct: 61  QIASFYSVISSQITPIMHGIKQDYLIRVPCSCKNTSGLSGYFYDTTYKVRPNDTFANISN 120

Query: 121 LIYSGQAWPVTGTLFPEEHLSIHIPCGCSENESQIVVTYTVQQNDTQTTIANLLNSTRAG 180
           LI+SGQAWPV  TL P E L+IHIPCGCSE++SQ+VVTYTVQ NDT   IANLLNST A 
Sbjct: 121 LIFSGQAWPVNHTLQPNETLAIHIPCGCSESKSQVVVTYTVQPNDTPMMIANLLNSTLAD 180

Query: 181 ILSMNIILDKNTGFIDLGWVLFVPKELKGLRVPPS---------NKKEKKHKNWXX-XXX 230
           + +MN +L  N  FID+GWVLFVPKE KGL + PS         +  + KH  W      
Sbjct: 181 MQNMNKVLAPNIEFIDVGWVLFVPKESKGLLLLPSATIKTLSMLDHFDNKHNKWTTIIIG 240

Query: 231 XXXXXXXXXXXXXXXXXXRRKGANQISKEDXXXXXXXXXXXXXXXXMNSNLHTRYISDAM 290
                             RR   ++IS ED                  S LH  ++ D +
Sbjct: 241 ILGGMTLLSIVTTIILILRRNKVDKISIEDSRLISGRSIANKTISSKYS-LHKEFVEDLI 299

Query: 291 SIESERPVVYNLDDIEEATNYFDD 314
           S ESERP++YNL+DIEEATN FD+
Sbjct: 300 SFESERPLIYNLEDIEEATNNFDE 323